RNA–Protein interactions for RNA: ENSMUST00000020478.13

Hcfc2-201, Transcript of Host cell factor 2, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Hcfc2, Length 3,422 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2-201ENSMUST00000020478 Hspa5P20029 655 aaKnown RBP21.01■□□□□ 0.95
Hcfc2-201ENSMUST00000020478 Chic2Q9D9G3 165 aa21.01■□□□□ 0.95
Hcfc2-201ENSMUST00000020478 Ncapd3Q6ZQK0 1506 aa21■□□□□ 0.95
Hcfc2-201ENSMUST00000020478 Rpap1Q80TE0 1409 aa20.99■□□□□ 0.95
Hcfc2-201ENSMUST00000020478 Slc4a3P16283 1227 aa20.98■□□□□ 0.95
Hcfc2-201ENSMUST00000020478 Iqgap2Q3UQ44 1575 aa20.95■□□□□ 0.94
Hcfc2-201ENSMUST00000020478 Stra8P70278 393 aa20.92■□□□□ 0.94
Hcfc2-201ENSMUST00000020478 Pak3Q61036 559 aa20.92■□□□□ 0.94
Hcfc2-201ENSMUST00000020478 Zbtb4Q5F293 982 aa20.89■□□□□ 0.93
Hcfc2-201ENSMUST00000020478 Setd5Q5XJV7 1441 aa20.87■□□□□ 0.93
Hcfc2-201ENSMUST00000020478 Pds5bQ4VA53 1446 aaKnown RBP20.86■□□□□ 0.93
Hcfc2-201ENSMUST00000020478 Atad2bE9Q166 1460 aaKnown RBP20.85■□□□□ 0.93
Hcfc2-201ENSMUST00000020478 PtprkP35822 1457 aa20.83■□□□□ 0.92
Hcfc2-201ENSMUST00000020478 Wdr43Q6ZQL4 677 aaKnown RBP20.82■□□□□ 0.92
Hcfc2-201ENSMUST00000020478 BlmO88700 1416 aa20.82■□□□□ 0.92
Hcfc2-201ENSMUST00000020478 Cttnbp2B9EJA2 1648 aa20.81■□□□□ 0.92
Hcfc2-201ENSMUST00000020478 Ercc6F8VPZ5 1481 aa20.79■□□□□ 0.92
Hcfc2-201ENSMUST00000020478 Fmn1Q05860 1466 aa20.77■□□□□ 0.92
Hcfc2-201ENSMUST00000020478 Pelp1Q9DBD5 1123 aaKnown RBP20.77■□□□□ 0.92
Hcfc2-201ENSMUST00000020478 Top2bQ64511 1612 aa20.76■□□□□ 0.91
Hcfc2-201ENSMUST00000020478 Cux2P70298 1426 aa20.76■□□□□ 0.91
Hcfc2-201ENSMUST00000020478 Mrs2Q5NCE8 434 aa20.74■□□□□ 0.91
Hcfc2-201ENSMUST00000020478 Wwc2Q6NXJ0 1187 aa20.72■□□□□ 0.91
Hcfc2-201ENSMUST00000020478 Frmpd1A2AKB4 1549 aa20.72■□□□□ 0.91
Hcfc2-201ENSMUST00000020478 Arap1Q4LDD4 1452 aa20.68■□□□□ 0.9
Hcfc2-201ENSMUST00000020478 Hdac5Q9Z2V6 1113 aa20.68■□□□□ 0.9
Hcfc2-201ENSMUST00000020478 Top2aQ01320 1528 aaKnown RBP20.67■□□□□ 0.9
Hcfc2-201ENSMUST00000020478 Eea1Q8BL66 1411 aa20.66■□□□□ 0.9
Hcfc2-201ENSMUST00000020478 Kcnh8P59111 1102 aa20.66■□□□□ 0.9
Hcfc2-201ENSMUST00000020478 Baz1bQ9Z277 1479 aa20.64■□□□□ 0.89
Hcfc2-201ENSMUST00000020478 Rtl5Q5DTT4 599 aa20.6■□□□□ 0.89
Hcfc2-201ENSMUST00000020478 Amer1Q7TS75 1132 aa20.58■□□□□ 0.89
Hcfc2-201ENSMUST00000020478 Arhgap27A2AB59 869 aa20.58■□□□□ 0.88
Hcfc2-201ENSMUST00000020478 Gm13697A2AK42 830 aa20.58■□□□□ 0.88
Hcfc2-201ENSMUST00000020478 Liat1Q810M6 228 aa20.57■□□□□ 0.88
Hcfc2-201ENSMUST00000020478 NrdcQ8BHG1 1161 aa20.56■□□□□ 0.88
Hcfc2-201ENSMUST00000020478 AqrQ8CFQ3 1481 aaKnown RBP20.53■□□□□ 0.88
Hcfc2-201ENSMUST00000020478 Ccdc18Q640L5 1455 aa20.53■□□□□ 0.88
Hcfc2-201ENSMUST00000020478 Kdm5bQ80Y84 1544 aa20.52■□□□□ 0.87
Hcfc2-201ENSMUST00000020478 Arhgap35Q91YM2 1499 aa20.51■□□□□ 0.87
Hcfc2-201ENSMUST00000020478 Smg6P61406 1418 aaKnown RBP20.5■□□□□ 0.87
Hcfc2-201ENSMUST00000020478 Rad54l2Q99NG0 1466 aa20.48■□□□□ 0.87
Hcfc2-201ENSMUST00000020478 Slc4a2P13808 1237 aaKnown RBP20.48■□□□□ 0.87
Hcfc2-201ENSMUST00000020478 Exoc6Q8R313 802 aa20.48■□□□□ 0.87
Hcfc2-201ENSMUST00000020478 Egfem1Q8C088 590 aa20.47■□□□□ 0.87
Hcfc2-201ENSMUST00000020478 Phldb1Q6PDH0 1371 aaKnown RBP20.46■□□□□ 0.87
Hcfc2-201ENSMUST00000020478 Washc2Q6PGL7 1334 aa20.45■□□□□ 0.86
Hcfc2-201ENSMUST00000020478 Upf2A2AT37 1269 aaKnown RBP20.43■□□□□ 0.86
Hcfc2-201ENSMUST00000020478 Aebp1Q640N1 1128 aa20.43■□□□□ 0.86
Hcfc2-201ENSMUST00000020478 Plppr3Q7TPB0 716 aa20.42■□□□□ 0.86
Hcfc2-201ENSMUST00000020478 Plcd4Q8K3R3 807 aa20.42■□□□□ 0.86
Hcfc2-201ENSMUST00000020478 4933416C03RikQ3V063 378 aa20.41■□□□□ 0.86
Hcfc2-201ENSMUST00000020478 ChgaP26339 463 aaKnown RBP20.4■□□□□ 0.86
Hcfc2-201ENSMUST00000020478 Prdm10Q3UTQ7 1184 aa20.4■□□□□ 0.86
Hcfc2-201ENSMUST00000020478 Ccer2J3QPU5 274 aa20.4■□□□□ 0.86
Hcfc2-201ENSMUST00000020478 DaxxO35613 739 aa20.39■□□□□ 0.85
Hcfc2-201ENSMUST00000020478 Dhx29Q6PGC1 1365 aaKnown RBP20.38■□□□□ 0.85
Hcfc2-201ENSMUST00000020478 LrpprcQ6PB66 1392 aaKnown RBP20.36■□□□□ 0.85
Hcfc2-201ENSMUST00000020478 Ccdc27Q3V036 639 aa20.36■□□□□ 0.85
Hcfc2-201ENSMUST00000020478 Arhgef5E9Q7D5 1581 aa20.36■□□□□ 0.85
Hcfc2-201ENSMUST00000020478 Naip1Q9QWK5 1403 aa20.35■□□□□ 0.85
Hcfc2-201ENSMUST00000020478 Wdr62Q3U3T8 1523 aa20.33■□□□□ 0.85
Hcfc2-201ENSMUST00000020478 Ofd1Q80Z25 1017 aa20.31■□□□□ 0.84
Hcfc2-201ENSMUST00000020478 Gtf3c3Q3TMP1 882 aa20.29■□□□□ 0.84
Hcfc2-201ENSMUST00000020478 3425401B19RikD3Z1D3 1412 aa20.27■□□□□ 0.84
Hcfc2-201ENSMUST00000020478 Rad21Q61550 635 aaKnown RBP20.26■□□□□ 0.83
Hcfc2-201ENSMUST00000020478 Erich6D3Z6S9 713 aa20.25■□□□□ 0.83
Hcfc2-201ENSMUST00000020478 Zfp644E9QA22 1323 aa20.24■□□□□ 0.83
Hcfc2-201ENSMUST00000020478 L3mbtl2P59178 703 aa20.21■□□□□ 0.83
Hcfc2-201ENSMUST00000020478 Cabp1Q9JLK7 227 aa20.21■□□□□ 0.83
Hcfc2-201ENSMUST00000020478 Hsp90aa1P07901 733 aaKnown RBP20.2■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 Eif4g1Q6NZJ6 1600 aaKnown RBP20.2■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 Ipo9Q91YE6 1041 aa20.19■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 ArxO35085 564 aa20.18■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 B4galnt3Q6L8S8 986 aa20.18■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 UacaQ8CGB3 1411 aa20.18■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 Duox2A2AQ99 1517 aa20.17■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 Tiam1Q60610 1591 aa20.17■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 Rgl3Q3UYI5 709 aa20.16■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 Dbr1Q923B1 550 aa20.16■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 Grwd1Q810D6 446 aaKnown RBP20.16■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 Shroom4Q1W617 1475 aa20.15■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 Irx3P81067 507 aa20.14■□□□□ 0.82
Hcfc2-201ENSMUST00000020478 Grin2bQ01097 1482 aa20.14■□□□□ 0.81
Hcfc2-201ENSMUST00000020478 TchhA0A0B4J1F9 1599 aa20.13■□□□□ 0.81
Hcfc2-201ENSMUST00000020478 Slx4Q6P1D7 1565 aa20.13■□□□□ 0.81
Hcfc2-201ENSMUST00000020478 Mphosph9A6H5Y1 991 aa20.12■□□□□ 0.81
Hcfc2-201ENSMUST00000020478 Ecm2Q5FW85 670 aa20.12■□□□□ 0.81
Hcfc2-201ENSMUST00000020478 Arid3cA6PWV5 409 aa20.11■□□□□ 0.81
Hcfc2-201ENSMUST00000020478 Camsap1A2AHC3 1581 aa20.11■□□□□ 0.81
Hcfc2-201ENSMUST00000020478 Tcerg1Q8CGF7 1100 aaKnown RBP20.1■□□□□ 0.81
Hcfc2-201ENSMUST00000020478 Kif27Q7M6Z4 1394 aa20.08■□□□□ 0.8
Hcfc2-201ENSMUST00000020478 AknaQ80VW7 1404 aa20.07■□□□□ 0.8
Hcfc2-201ENSMUST00000020478 Iqcf3Q9D498 203 aa20.07■□□□□ 0.8
Hcfc2-201ENSMUST00000020478 Gm13695A2AK44 830 aa20.06■□□□□ 0.8
Hcfc2-201ENSMUST00000020478 Pkd2O35245 966 aa20.05■□□□□ 0.8
Hcfc2-201ENSMUST00000020478 Naip5Q9R016 1403 aa20.04■□□□□ 0.8
Hcfc2-201ENSMUST00000020478 Mia2Q91ZV0 1396 aa20.04■□□□□ 0.8
Hcfc2-201ENSMUST00000020478 NrkQ9R0G8 1455 aa20.03■□□□□ 0.8
Hcfc2-201ENSMUST00000020478 PnisrA2AJT4 805 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms