RNA–Protein interactions for RNA: ENSMUST00000020478.13

Hcfc2-201, Transcript of Host cell factor 2, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Hcfc2, Length 3,422 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2-201ENSMUST00000020478 Rhox8Q6VSS7 320 aa26.64■■□□□ 1.86
Hcfc2-201ENSMUST00000020478 NischQ80TM9 1593 aa26.21■■□□□ 1.79
Hcfc2-201ENSMUST00000020478 Ehmt2Q9Z148 1263 aaKnown RBP25.57■■□□□ 1.68
Hcfc2-201ENSMUST00000020478 Rpgrip1Q9EPQ2 1331 aa24.97■■□□□ 1.59
Hcfc2-201ENSMUST00000020478 Abcc9P70170 1546 aa24.88■■□□□ 1.57
Hcfc2-201ENSMUST00000020478 Ccdc136Q3TVA9 1136 aa24.75■■□□□ 1.55
Hcfc2-201ENSMUST00000020478 Acin1Q9JIX8 1338 aaKnown RBP24.72■■□□□ 1.55
Hcfc2-201ENSMUST00000020478 Abcc8B2RUS7 1588 aa24.6■■□□□ 1.53
Hcfc2-201ENSMUST00000020478 Pcgf6Q99NA9 353 aa24.59■■□□□ 1.53
Hcfc2-201ENSMUST00000020478 Ccdc180J3QNE4 1664 aa24.34■■□□□ 1.49
Hcfc2-201ENSMUST00000020478 Gm35339A0A140LHH9 1649 aa24.23■■□□□ 1.47
Hcfc2-201ENSMUST00000020478 Supt5hO55201 1082 aaKnown RBP24.13■■□□□ 1.45
Hcfc2-201ENSMUST00000020478 Rtl1Q7M732 1744 aa24.1■■□□□ 1.45
Hcfc2-201ENSMUST00000020478 Zeb1Q64318 1117 aa23.82■■□□□ 1.4
Hcfc2-201ENSMUST00000020478 Neurod1Q60867 357 aa23.81■■□□□ 1.4
Hcfc2-201ENSMUST00000020478 Zcchc6Q5BLK4 1491 aaKnown RBP23.71■■□□□ 1.39
Hcfc2-201ENSMUST00000020478 Trim41Q5NCC3 630 aa23.66■■□□□ 1.38
Hcfc2-201ENSMUST00000020478 Gab3Q8BSM5 595 aa23.61■■□□□ 1.37
Hcfc2-201ENSMUST00000020478 HrcG5E8J6 738 aa23.6■■□□□ 1.37
Hcfc2-201ENSMUST00000020478 Cngb1E1AZ71 1325 aa23.6■■□□□ 1.37
Hcfc2-201ENSMUST00000020478 Dcaf1Q80TR8 1506 aa23.46■■□□□ 1.35
Hcfc2-201ENSMUST00000020478 Esf1Q3V1V3 845 aaKnown RBP23.3■■□□□ 1.32
Hcfc2-201ENSMUST00000020478 Ppargc1bQ8VHJ7 1014 aa23.3■■□□□ 1.32
Hcfc2-201ENSMUST00000020478 Sall2Q9QX96 1004 aa23.2■■□□□ 1.3
Hcfc2-201ENSMUST00000020478 Csrnp3P59055 597 aa23.17■■□□□ 1.3
Hcfc2-201ENSMUST00000020478 1700123L14RikQ3V2K7 440 aa23.1■■□□□ 1.29
Hcfc2-201ENSMUST00000020478 Gm38655A0A286YDK6 273 aa23.08■■□□□ 1.29
Hcfc2-201ENSMUST00000020478 Mier1Q5UAK0 511 aa23.02■■□□□ 1.28
Hcfc2-201ENSMUST00000020478 Wdr66E9Q743 1299 aa23.01■■□□□ 1.27
Hcfc2-201ENSMUST00000020478 ScribQ80U72 1612 aa23■■□□□ 1.27
Hcfc2-201ENSMUST00000020478 Las1lA2BE28 776 aaKnown RBP22.98■■□□□ 1.27
Hcfc2-201ENSMUST00000020478 Rb1cc1Q9ESK9 1588 aa22.97■■□□□ 1.27
Hcfc2-201ENSMUST00000020478 Chic1Q8CBW7 227 aa22.85■■□□□ 1.25
Hcfc2-201ENSMUST00000020478 Kdm5dQ62240 1548 aa22.84■■□□□ 1.25
Hcfc2-201ENSMUST00000020478 Myt1lP97500 1187 aa22.79■■□□□ 1.24
Hcfc2-201ENSMUST00000020478 Aebp2Q9Z248 504 aaKnown RBP22.75■■□□□ 1.23
Hcfc2-201ENSMUST00000020478 UbtfP25976 765 aaKnown RBP22.72■■□□□ 1.23
Hcfc2-201ENSMUST00000020478 NefmP08553 848 aa22.71■■□□□ 1.23
Hcfc2-201ENSMUST00000020478 Anks4bQ8K3X6 423 aa22.67■■□□□ 1.22
Hcfc2-201ENSMUST00000020478 Il27Q8K3I6 234 aa22.66■■□□□ 1.22
Hcfc2-201ENSMUST00000020478 Cep164Q5DU05 1446 aa22.57■■□□□ 1.2
Hcfc2-201ENSMUST00000020478 Cdk11bP24788 784 aaKnown RBP22.53■■□□□ 1.2
Hcfc2-201ENSMUST00000020478 Nop58Q6DFW4 536 aaKnown RBP22.53■■□□□ 1.2
Hcfc2-201ENSMUST00000020478 NacadQ5SWP3 1504 aa22.48■■□□□ 1.19
Hcfc2-201ENSMUST00000020478 Npm2Q80W85 207 aa22.41■■□□□ 1.18
Hcfc2-201ENSMUST00000020478 CenpbP27790 599 aa22.4■■□□□ 1.18
Hcfc2-201ENSMUST00000020478 Rsf1E9PWW9 1441 aaKnown RBP22.37■■□□□ 1.17
Hcfc2-201ENSMUST00000020478 Baz1aO88379 1555 aa22.35■■□□□ 1.17
Hcfc2-201ENSMUST00000020478 Mapk8ip2Q9ERE9 830 aa22.28■■□□□ 1.16
Hcfc2-201ENSMUST00000020478 Ap3b1Q9Z1T1 1105 aa22.26■■□□□ 1.15
Hcfc2-201ENSMUST00000020478 Cecr2E9Q2Z1 1453 aa22.23■■□□□ 1.15
Hcfc2-201ENSMUST00000020478 Aplp2Q06335 707 aa22.19■■□□□ 1.14
Hcfc2-201ENSMUST00000020478 SafbD3YXK2 937 aaKnown RBP22.19■■□□□ 1.14
Hcfc2-201ENSMUST00000020478 Ccdc88bQ4QRL3 1481 aa22.14■■□□□ 1.14
Hcfc2-201ENSMUST00000020478 ClspnQ80YR7 1315 aa22.14■■□□□ 1.14
Hcfc2-201ENSMUST00000020478 Fam71e1A1L3C1 212 aa22.03■■□□□ 1.12
Hcfc2-201ENSMUST00000020478 Hnrnpul2Q00PI9 745 aaKnown RBP21.99■■□□□ 1.11
Hcfc2-201ENSMUST00000020478 Eid3Q3V124 375 aa21.99■■□□□ 1.11
Hcfc2-201ENSMUST00000020478 TonslQ6NZL6 1363 aa21.98■■□□□ 1.11
Hcfc2-201ENSMUST00000020478 Sycp2Q9CUU3 1500 aa21.97■■□□□ 1.11
Hcfc2-201ENSMUST00000020478 Plekhg3Q4VAC9 1341 aa21.96■■□□□ 1.11
Hcfc2-201ENSMUST00000020478 DiexfQ8BTT6 772 aaKnown RBP21.91■■□□□ 1.1
Hcfc2-201ENSMUST00000020478 Brd4Q9ESU6 1400 aaKnown RBP21.81■■□□□ 1.08
Hcfc2-201ENSMUST00000020478 Bcl11aQ9QYE3 773 aa21.77■■□□□ 1.07
Hcfc2-201ENSMUST00000020478 Ifnlr1Q8CGK5 535 aa21.76■■□□□ 1.07
Hcfc2-201ENSMUST00000020478 Myt1Q8CFC2 1127 aa21.75■■□□□ 1.07
Hcfc2-201ENSMUST00000020478 Lmod2Q3UHZ5 550 aa21.68■■□□□ 1.06
Hcfc2-201ENSMUST00000020478 Slc24a1Q91WD8 1130 aa21.67■■□□□ 1.06
Hcfc2-201ENSMUST00000020478 Smarca2Q6DIC0 1577 aa21.67■■□□□ 1.06
Hcfc2-201ENSMUST00000020478 Synj1Q8CHC4 1574 aa21.61■■□□□ 1.05
Hcfc2-201ENSMUST00000020478 Golga3P55937 1487 aa21.59■■□□□ 1.05
Hcfc2-201ENSMUST00000020478 Ube2uB1AUC4 352 aa21.55■■□□□ 1.04
Hcfc2-201ENSMUST00000020478 BicraF8VPZ9 1578 aa21.54■■□□□ 1.04
Hcfc2-201ENSMUST00000020478 PrkcshO08795 521 aa21.5■■□□□ 1.03
Hcfc2-201ENSMUST00000020478 Ubl4bQ9CQ84 188 aa21.48■■□□□ 1.03
Hcfc2-201ENSMUST00000020478 CftrP26361 1476 aa21.46■■□□□ 1.03
Hcfc2-201ENSMUST00000020478 Ttbk1Q6PCN3 1308 aa21.45■■□□□ 1.02
Hcfc2-201ENSMUST00000020478 Fam50aQ9WV03 339 aaKnown RBP21.43■■□□□ 1.02
Hcfc2-201ENSMUST00000020478 Clip1Q922J3 1391 aa21.39■■□□□ 1.01
Hcfc2-201ENSMUST00000020478 Npm1Q61937 292 aaKnown RBP21.38■■□□□ 1.01
Hcfc2-201ENSMUST00000020478 Nolc1E9Q5C9 702 aaKnown RBP21.36■■□□□ 1.01
Hcfc2-201ENSMUST00000020478 NclP09405 707 aaKnown RBP21.36■■□□□ 1.01
Hcfc2-201ENSMUST00000020478 Tnnt3Q9QZ47 272 aa21.35■■□□□ 1.01
Hcfc2-201ENSMUST00000020478 Eif5bQ05D44 1216 aaKnown RBP21.32■■□□□ 1
Hcfc2-201ENSMUST00000020478 Kif15Q6P9L6 1387 aa21.3■■□□□ 1
Hcfc2-201ENSMUST00000020478 Anp32aO35381 247 aa21.26■□□□□ 0.99
Hcfc2-201ENSMUST00000020478 Dnajc5bQ9CQ94 199 aa21.25■□□□□ 0.99
Hcfc2-201ENSMUST00000020478 Rapgef2Q8CHG7 1496 aa21.22■□□□□ 0.99
Hcfc2-201ENSMUST00000020478 Cep162Q6ZQ06 1403 aa21.2■□□□□ 0.98
Hcfc2-201ENSMUST00000020478 Fkbp15Q6P9Q6 1216 aaKnown RBP21.2■□□□□ 0.98
Hcfc2-201ENSMUST00000020478 Zbtb7cQ8VCZ7 619 aa21.2■□□□□ 0.98
Hcfc2-201ENSMUST00000020478 Crybg2B7ZCC2 1516 aa21.2■□□□□ 0.98
Hcfc2-201ENSMUST00000020478 Calr4Q3TQS0 420 aa21.19■□□□□ 0.98
Hcfc2-201ENSMUST00000020478 Znf710Q3U288 666 aa21.19■□□□□ 0.98
Hcfc2-201ENSMUST00000020478 P3h3Q8CG70 732 aa21.14■□□□□ 0.97
Hcfc2-201ENSMUST00000020478 Ppp4r2Q0VGB7 417 aa21.13■□□□□ 0.97
Hcfc2-201ENSMUST00000020478 Sin3aQ60520 1274 aaKnown RBP21.08■□□□□ 0.96
Hcfc2-201ENSMUST00000020478 Cc2d2aQ8CFW7 1633 aa21.05■□□□□ 0.96
Hcfc2-201ENSMUST00000020478 Supt16hQ920B9 1047 aa21.02■□□□□ 0.96
Hcfc2-201ENSMUST00000020478 Smarca4Q3TKT4 1613 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 71.4 ms