RNA–Protein interactions for RNA: ENSMUST00000005218.14

Cd44-201, Transcript of CD44 antigen, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Cd44, Length 5,614 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-201ENSMUST00000005218 1700123L14RikQ3V2K7 440 aa9.26□□□□□ -0.93
Cd44-201ENSMUST00000005218 Kdm5dQ62240 1548 aa9.22□□□□□ -0.93
Cd44-201ENSMUST00000005218 Wdr43Q6ZQL4 677 aaKnown RBP9.22□□□□□ -0.93
Cd44-201ENSMUST00000005218 P3h3Q8CG70 732 aa9.22□□□□□ -0.93
Cd44-201ENSMUST00000005218 Rgl3Q3UYI5 709 aa9.21□□□□□ -0.94
Cd44-201ENSMUST00000005218 Plppr3Q7TPB0 716 aa9.21□□□□□ -0.94
Cd44-201ENSMUST00000005218 Kif15Q6P9L6 1387 aa9.21□□□□□ -0.94
Cd44-201ENSMUST00000005218 Gm13695A2AK44 830 aa9.2□□□□□ -0.94
Cd44-201ENSMUST00000005218 Fam71e1A1L3C1 212 aa9.18□□□□□ -0.94
Cd44-201ENSMUST00000005218 Eea1Q8BL66 1411 aa9.16□□□□□ -0.94
Cd44-201ENSMUST00000005218 Ccdc88bQ4QRL3 1481 aa9.16□□□□□ -0.94
Cd44-201ENSMUST00000005218 Grwd1Q810D6 446 aaKnown RBP9.14□□□□□ -0.95
Cd44-201ENSMUST00000005218 Trim26Q99PN3 545 aa9.14□□□□□ -0.95
Cd44-201ENSMUST00000005218 Hdac5Q9Z2V6 1113 aa9.14□□□□□ -0.95
Cd44-201ENSMUST00000005218 SafbD3YXK2 937 aaKnown RBP9.13□□□□□ -0.95
Cd44-201ENSMUST00000005218 Upf2A2AT37 1269 aaKnown RBP9.12□□□□□ -0.95
Cd44-201ENSMUST00000005218 Ofd1Q80Z25 1017 aa9.11□□□□□ -0.95
Cd44-201ENSMUST00000005218 Arhgap27A2AB59 869 aa9.09□□□□□ -0.95
Cd44-201ENSMUST00000005218 Hspa5P20029 655 aaKnown RBP9.09□□□□□ -0.95
Cd44-201ENSMUST00000005218 Ccdc18Q640L5 1455 aa9.09□□□□□ -0.95
Cd44-201ENSMUST00000005218 Apbb1Q9QXJ1 710 aa9.08□□□□□ -0.96
Cd44-201ENSMUST00000005218 Kdm2aP59997 1161 aa9.08□□□□□ -0.96
Cd44-201ENSMUST00000005218 Clstn2Q9ER65 966 aa9.08□□□□□ -0.96
Cd44-201ENSMUST00000005218 Card11Q8CIS0 1159 aa9.06□□□□□ -0.96
Cd44-201ENSMUST00000005218 Vsig10D3YX43 558 aa9.06□□□□□ -0.96
Cd44-201ENSMUST00000005218 Ercc6F8VPZ5 1481 aa9.06□□□□□ -0.96
Cd44-201ENSMUST00000005218 Cep162Q6ZQ06 1403 aa9.04□□□□□ -0.96
Cd44-201ENSMUST00000005218 CanxP35564 591 aaKnown RBP9.04□□□□□ -0.96
Cd44-201ENSMUST00000005218 Hsp90aa1P07901 733 aaKnown RBP9.04□□□□□ -0.96
Cd44-201ENSMUST00000005218 Trim30dE9PWL0 497 aa9.03□□□□□ -0.96
Cd44-201ENSMUST00000005218 Neurod2Q62414 383 aa9.03□□□□□ -0.96
Cd44-201ENSMUST00000005218 DekQ7TNV0 380 aaKnown RBP9.03□□□□□ -0.96
Cd44-201ENSMUST00000005218 Arid4bA2CG63 1314 aaKnown RBP9.02□□□□□ -0.96
Cd44-201ENSMUST00000005218 Sin3aQ60520 1274 aaKnown RBP9.02□□□□□ -0.97
Cd44-201ENSMUST00000005218 Wwc2Q6NXJ0 1187 aa9.02□□□□□ -0.97
Cd44-201ENSMUST00000005218 Hsp90ab1P11499 724 aaKnown RBP9.01□□□□□ -0.97
Cd44-201ENSMUST00000005218 Slc4a3P16283 1227 aa9.01□□□□□ -0.97
Cd44-201ENSMUST00000005218 Rrp7aQ9D1C9 280 aaKnown RBP9.01□□□□□ -0.97
Cd44-201ENSMUST00000005218 Dbr1Q923B1 550 aa9.01□□□□□ -0.97
Cd44-201ENSMUST00000005218 Mroh3A0A1D5RM54 893 aa9□□□□□ -0.97
Cd44-201ENSMUST00000005218 Mtus2Q3UHD3 1353 aa9□□□□□ -0.97
Cd44-201ENSMUST00000005218 Mia2Q91ZV0 1396 aa8.98□□□□□ -0.97
Cd44-201ENSMUST00000005218 Fgd1P52734 960 aa8.98□□□□□ -0.97
Cd44-201ENSMUST00000005218 Irx6Q9ER75 438 aa8.98□□□□□ -0.97
Cd44-201ENSMUST00000005218 Fmn1Q05860 1466 aa8.97□□□□□ -0.97
Cd44-201ENSMUST00000005218 Gm20521D3Z5F7 333 aa8.97□□□□□ -0.97
Cd44-201ENSMUST00000005218 Srpk2O54781 681 aaKnown RBP8.97□□□□□ -0.97
Cd44-201ENSMUST00000005218 Armcx1Q9CX83 456 aa8.97□□□□□ -0.97
Cd44-201ENSMUST00000005218 Cwc22Q8C5N3 908 aaKnown RBP8.97□□□□□ -0.97
Cd44-201ENSMUST00000005218 B4galnt3Q6L8S8 986 aa8.97□□□□□ -0.97
Cd44-201ENSMUST00000005218 Ythdc1E9Q5K9 736 aaKnown RBP8.96□□□□□ -0.97
Cd44-201ENSMUST00000005218 Stk24Q99KH8 431 aa8.96□□□□□ -0.97
Cd44-201ENSMUST00000005218 Cnga1P29974 684 aa8.95□□□□□ -0.98
Cd44-201ENSMUST00000005218 Cecr2E9Q2Z1 1453 aa8.95□□□□□ -0.98
Cd44-201ENSMUST00000005218 Safb2Q80YR5 991 aaKnown RBP8.95□□□□□ -0.98
Cd44-201ENSMUST00000005218 Pkd2O35245 966 aa8.94□□□□□ -0.98
Cd44-201ENSMUST00000005218 IqubQ8CDK3 788 aa8.93□□□□□ -0.98
Cd44-201ENSMUST00000005218 Rundc1Q0VDN7 615 aa8.93□□□□□ -0.98
Cd44-201ENSMUST00000005218 Aebp1Q640N1 1128 aa8.93□□□□□ -0.98
Cd44-201ENSMUST00000005218 Exoc6Q8R313 802 aa8.93□□□□□ -0.98
Cd44-201ENSMUST00000005218 Exosc9Q9JHI7 438 aaKnown RBP8.92□□□□□ -0.98
Cd44-201ENSMUST00000005218 Kif27Q7M6Z4 1394 aa8.92□□□□□ -0.98
Cd44-201ENSMUST00000005218 Sycp2Q9CUU3 1500 aa8.92□□□□□ -0.98
Cd44-201ENSMUST00000005218 Ecm2Q5FW85 670 aa8.91□□□□□ -0.98
Cd44-201ENSMUST00000005218 Rapgef2Q8CHG7 1496 aa8.91□□□□□ -0.98
Cd44-201ENSMUST00000005218 Synj1Q8CHC4 1574 aa8.91□□□□□ -0.98
Cd44-201ENSMUST00000005218 Stag3O70576 1240 aa8.9□□□□□ -0.98
Cd44-201ENSMUST00000005218 CftrP26361 1476 aa8.9□□□□□ -0.99
Cd44-201ENSMUST00000005218 Ccdc27Q3V036 639 aa8.9□□□□□ -0.99
Cd44-201ENSMUST00000005218 Gm6268A2A3U9 297 aa8.89□□□□□ -0.99
Cd44-201ENSMUST00000005218 Mphosph9A6H5Y1 991 aa8.89□□□□□ -0.99
Cd44-201ENSMUST00000005218 Lmod3E9QA62 571 aa8.89□□□□□ -0.99
Cd44-201ENSMUST00000005218 Baz1bQ9Z277 1479 aa8.89□□□□□ -0.99
Cd44-201ENSMUST00000005218 Cabp1Q9JLK7 227 aa8.89□□□□□ -0.99
Cd44-201ENSMUST00000005218 Rpap1Q80TE0 1409 aa8.88□□□□□ -0.99
Cd44-201ENSMUST00000005218 Spryd3E9Q9B3 442 aa8.88□□□□□ -0.99
Cd44-201ENSMUST00000005218 Map4P27546 1125 aaKnown RBP8.88□□□□□ -0.99
Cd44-201ENSMUST00000005218 Arhgap35Q91YM2 1499 aa8.88□□□□□ -0.99
Cd44-201ENSMUST00000005218 NgefQ8CHT1 710 aa8.88□□□□□ -0.99
Cd44-201ENSMUST00000005218 Supt16hQ920B9 1047 aa8.88□□□□□ -0.99
Cd44-201ENSMUST00000005218 Mapk8ip3Q9ESN9 1337 aa8.88□□□□□ -0.99
Cd44-201ENSMUST00000005218 Plcb2A3KGF7 1181 aa8.87□□□□□ -0.99
Cd44-201ENSMUST00000005218 Trak1Q6PD31 939 aa8.87□□□□□ -0.99
Cd44-201ENSMUST00000005218 Smarca2Q6DIC0 1577 aa8.87□□□□□ -0.99
Cd44-201ENSMUST00000005218 Fyco1Q8VDC1 1437 aa8.87□□□□□ -0.99
Cd44-201ENSMUST00000005218 Trim44Q9QXA7 346 aa8.86□□□□□ -0.99
Cd44-201ENSMUST00000005218 Ifit1bl1D3Z6F0 470 aa8.86□□□□□ -0.99
Cd44-201ENSMUST00000005218 Pds5bQ4VA53 1446 aaKnown RBP8.86□□□□□ -0.99
Cd44-201ENSMUST00000005218 1700019A02RikA0A087WPV9 146 aa8.85□□□□□ -0.99
Cd44-201ENSMUST00000005218 Ccdc9Q8VC31 543 aaKnown RBP8.85□□□□□ -0.99
Cd44-201ENSMUST00000005218 PtmaP26350 111 aa8.84□□□□□ -0.99
Cd44-201ENSMUST00000005218 Speer4f1Q9D5Q6 258 aa8.83□□□□□ -1
Cd44-201ENSMUST00000005218 Ppm1gQ61074 542 aa8.83□□□□□ -1
Cd44-201ENSMUST00000005218 Rwdd1Q9CQK7 243 aa8.83□□□□□ -1
Cd44-201ENSMUST00000005218 Bcl11aQ9QYE3 773 aa8.83□□□□□ -1
Cd44-201ENSMUST00000005218 CntlnA2AM05 1397 aa8.82□□□□□ -1
Cd44-201ENSMUST00000005218 ScribQ80U72 1612 aa8.82□□□□□ -1
Cd44-201ENSMUST00000005218 CatipB9EKE5 520 aa8.82□□□□□ -1
Cd44-201ENSMUST00000005218 Nolc1E9Q5C9 702 aaKnown RBP8.81□□□□□ -1
Cd44-201ENSMUST00000005218 Tcerg1Q8CGF7 1100 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms