RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 C18orf15Q96N68 181 aa4.51□□□□□ -1.69
CBWD3-210ENST00000614398 C20orf78Q9BR46 151 aa4.51□□□□□ -1.69
CBWD3-210ENST00000614398 SPANXDQ9BXN6 97 aa4.51□□□□□ -1.69
CBWD3-210ENST00000614398 A0A1B0GX51 115 aa4.5□□□□□ -1.69
CBWD3-210ENST00000614398 PLAC8L1A1L4L8 177 aa4.5□□□□□ -1.69
CBWD3-210ENST00000614398 LCE2BO14633 110 aa4.5□□□□□ -1.69
CBWD3-210ENST00000614398 PRB4P10163 310 aaPredicted RBP4.5□□□□□ -1.69
CBWD3-210ENST00000614398 RNASE3P12724 160 aaKnown RBP4.5□□□□□ -1.69
CBWD3-210ENST00000614398 RPS28P62857 69 aaKnown RBP4.5□□□□□ -1.69
CBWD3-210ENST00000614398 LGALS9BQ3B8N2 356 aa4.5□□□□□ -1.69
CBWD3-210ENST00000614398 RNASEKQ6P5S7 137 aaKnown RBP4.5□□□□□ -1.69
CBWD3-210ENST00000614398 LINC01587Q99440 93 aa4.5□□□□□ -1.69
CBWD3-210ENST00000614398 MDFICQ9P1T7 246 aa4.5□□□□□ -1.69
CBWD3-210ENST00000614398 TP73-AS1Q9UF72 201 aa4.5□□□□□ -1.69
CBWD3-210ENST00000614398 APOMO95445 188 aa4.5□□□□□ -1.69
CBWD3-210ENST00000614398 Q6ZQT7 251 aa4.5□□□□□ -1.69
CBWD3-210ENST00000614398 A0A1B0GXF2 115 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 CCDC179H3BU77 68 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 SPINK4O60575 86 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 IFITM1P13164 125 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 RRN3P1Q2M238 152 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 Q8NAQ8 132 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 PPDPFLQ8WWR9 84 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 PRELID3AQ96N28 172 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 IGHV1-24A0A0C4DH33 117 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 PRSS29PA6NIE9 313 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 LYRM9A8MSI8 78 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 M0R2P5 195 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 TAL2Q16559 108 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 SH2D6Q7Z4S9 175 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 POM121L12Q8N7R1 296 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 NUP35Q8NFH5 326 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 OR13C6PQ8NH95 151 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 RAB37Q96AX2 223 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 URB1-AS1Q96HZ7 61 aa4.49□□□□□ -1.69
CBWD3-210ENST00000614398 A0A1B0GUT8 65 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 HIGD1CA8MV81 97 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 IGLL5B9A064 214 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 GNRH2O43555 120 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 ARMS2P0C7Q2 107 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 GAGE2BQ13066 116 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 RIGQ13278 110 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 GAGE2EQ4V326 116 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 RASL10AQ92737 203 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 EDA2RQ9HAV5 297 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 GAGE2DQ9UEU5 116 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 DNHD1Q96M86 4753 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 DEFB135Q30KP9 77 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 TTC32Q5I0X7 151 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 LYZL1Q6UWQ5 148 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 SBSPONQ8IVN8 264 aa4.48□□□□□ -1.69
CBWD3-210ENST00000614398 NAA38Q9BRA0 125 aaKnown RBP4.48□□□□□ -1.69
CBWD3-210ENST00000614398 A0A1B0GWB2 263 aa4.47□□□□□ -1.69
CBWD3-210ENST00000614398 H3BVH4 76 aa4.47□□□□□ -1.69
CBWD3-210ENST00000614398 S100A4P26447 101 aaKnown RBP4.47□□□□□ -1.69
CBWD3-210ENST00000614398 LGALS9CQ6DKI2 356 aa4.47□□□□□ -1.69
CBWD3-210ENST00000614398 IGHV4-28A0A0C4DH34 117 aa4.47□□□□□ -1.69
CBWD3-210ENST00000614398 J3KT08 172 aa4.47□□□□□ -1.69
CBWD3-210ENST00000614398 RS1O15537 224 aa4.47□□□□□ -1.69
CBWD3-210ENST00000614398 HBBP68871 147 aa4.47□□□□□ -1.69
CBWD3-210ENST00000614398 MRPL23Q16540 153 aaKnown RBP4.47□□□□□ -1.69
CBWD3-210ENST00000614398 MEIG1Q5JSS6 88 aa4.47□□□□□ -1.69
CBWD3-210ENST00000614398 CFAP126Q5VTH2 177 aa4.47□□□□□ -1.69
CBWD3-210ENST00000614398 ZFP2Q6ZN57 461 aa4.47□□□□□ -1.69
CBWD3-210ENST00000614398 TIMM8BQ9Y5J9 83 aaPredicted RBP4.47□□□□□ -1.69
CBWD3-210ENST00000614398 TMSB15BA0A087X1C1 80 aa4.46□□□□□ -1.7
CBWD3-210ENST00000614398 A8MWV9 139 aa4.46□□□□□ -1.7
CBWD3-210ENST00000614398 ZNRF2Q8NHG8 242 aa4.46□□□□□ -1.7
CBWD3-210ENST00000614398 PGLYRP4Q96LB8 373 aa4.46□□□□□ -1.7
CBWD3-210ENST00000614398 PHLDA3Q9Y5J5 127 aa4.46□□□□□ -1.7
CBWD3-210ENST00000614398 KIF25-AS1Q9Y6Z4 181 aa4.46□□□□□ -1.7
CBWD3-210ENST00000614398 TRAV4A0A0B4J268 109 aa4.46□□□□□ -1.7
CBWD3-210ENST00000614398 GCSHP23434 173 aa4.46□□□□□ -1.7
CBWD3-210ENST00000614398 ZMAT4Q9H898 229 aa4.46□□□□□ -1.7
CBWD3-210ENST00000614398 DKK2Q9UBU2 259 aa4.46□□□□□ -1.7
CBWD3-210ENST00000614398 NOTCH3Q9UM47 2321 aa4.45□□□□□ -1.7
CBWD3-210ENST00000614398 PRB2P02812 416 aaPredicted RBP4.45□□□□□ -1.7
CBWD3-210ENST00000614398 LINC00173Q6ZV60 143 aa4.45□□□□□ -1.7
CBWD3-210ENST00000614398 TEN1Q86WV5 123 aa4.45□□□□□ -1.7
CBWD3-210ENST00000614398 NBEAL1Q6ZS30 2694 aa4.45□□□□□ -1.7
CBWD3-210ENST00000614398 MUC4Q99102 2169 aa4.45□□□□□ -1.7
CBWD3-210ENST00000614398 IGHV3OR16-12A0A075B7B8 117 aa4.45□□□□□ -1.7
CBWD3-210ENST00000614398 SPART-AS1P0CW21 52 aa4.45□□□□□ -1.7
CBWD3-210ENST00000614398 DEFB121Q5J5C9 76 aa4.45□□□□□ -1.7
CBWD3-210ENST00000614398 SPANXN1Q5VSR9 72 aa4.45□□□□□ -1.7
CBWD3-210ENST00000614398 MGAM2Q2M2H8 2515 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 F5H768 121 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 M0R381 172 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 SNCGO76070 127 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 LINC00315P59091 139 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 ZNF876PQ49A33 203 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 CEND1Q8N111 149 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 DPH3P1Q9H4G8 78 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 U3KQK5 164 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 CRYGDP07320 174 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 FXYD2P54710 66 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 LYRM7Q5U5X0 104 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 FAM104BQ5XKR9 115 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 NFE4Q86UQ8 179 aa4.44□□□□□ -1.7
CBWD3-210ENST00000614398 RETNQ9HD89 108 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms