RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 RNF151Q2KHN1 245 aa9.35□□□□□ -0.91
CHRNB4-204ENST00000559849 WDR73Q6P4I2 378 aa9.35□□□□□ -0.91
CHRNB4-204ENST00000559849 TRAV9-1A0A075B6T8 112 aa9.34□□□□□ -0.91
CHRNB4-204ENST00000559849 ZNF56Q15929 161 aa9.34□□□□□ -0.91
CHRNB4-204ENST00000559849 C6orf223Q8N319 242 aa9.34□□□□□ -0.91
CHRNB4-204ENST00000559849 VPS25Q9BRG1 176 aa9.34□□□□□ -0.91
CHRNB4-204ENST00000559849 A8MWL6 223 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 NTF3P20783 257 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 VAMP8Q9BV40 100 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 KRTAP1-5Q9BYS1 174 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 MSRB1Q9NZV6 116 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 KIF25-AS1Q9Y6Z4 181 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 TRAV9-2A0A087WT02 112 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 TRAV8-6A0A0B4J262 113 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 F5H697 171 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 LINC00694P0DN24 101 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 CTRLP40313 264 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
CHRNB4-204ENST00000559849 SMIM27A0A1W2PRY6 76 aa9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 PRSS29PA6NIE9 313 aa9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 RPL36AP83881 106 aaKnown RBP9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 CT83Q5H943 113 aa9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 LELP1Q5T871 98 aa9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 RPL36ALQ969Q0 106 aaKnown RBP9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 TRBV7-3A0A075B6L6 115 aa9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 DNAH10OSP0CZ25 163 aa9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 EVI2AP22794 236 aa9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 LINC00315P59091 139 aa9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 OR10J3Q5JRS4 329 aa9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 GTSF1Q8WW33 167 aa9.32□□□□□ -0.92
CHRNB4-204ENST00000559849 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
CHRNB4-204ENST00000559849 IGHV3-38A0A0C4DH36 116 aa9.31□□□□□ -0.92
CHRNB4-204ENST00000559849 TWIST1Q15672 202 aa9.31□□□□□ -0.92
CHRNB4-204ENST00000559849 COX11Q9Y6N1 276 aa9.31□□□□□ -0.92
CHRNB4-204ENST00000559849 FAT2Q9NYQ8 4349 aa9.31□□□□□ -0.92
CHRNB4-204ENST00000559849 FOXA3P55318 350 aaPredicted RBP9.3□□□□□ -0.92
CHRNB4-204ENST00000559849 TSKUQ8WUA8 353 aa9.3□□□□□ -0.92
CHRNB4-204ENST00000559849 STPG4Q8N801 248 aa9.3□□□□□ -0.92
CHRNB4-204ENST00000559849 PAM16Q9Y3D7 125 aa9.3□□□□□ -0.92
CHRNB4-204ENST00000559849 TRAPPC1Q9Y5R8 145 aa9.3□□□□□ -0.92
CHRNB4-204ENST00000559849 UBE2D3P61077 147 aa9.29□□□□□ -0.92
CHRNB4-204ENST00000559849 UBE2D2P62837 147 aa9.29□□□□□ -0.92
CHRNB4-204ENST00000559849 GFRA4Q9GZZ7 299 aa9.29□□□□□ -0.92
CHRNB4-204ENST00000559849 DPH3P1Q9H4G8 78 aa9.29□□□□□ -0.92
CHRNB4-204ENST00000559849 UQCR10Q9UDW1 63 aa9.29□□□□□ -0.92
CHRNB4-204ENST00000559849 LAMTOR2Q9Y2Q5 125 aa9.29□□□□□ -0.92
CHRNB4-204ENST00000559849 FAM231BA6NCW3 169 aa9.28□□□□□ -0.92
CHRNB4-204ENST00000559849 MGPP08493 103 aa9.28□□□□□ -0.92
CHRNB4-204ENST00000559849 LINC01556Q5JQF7 62 aa9.28□□□□□ -0.92
CHRNB4-204ENST00000559849 NEXN-AS1Q8NBZ9 246 aa9.28□□□□□ -0.92
CHRNB4-204ENST00000559849 NAT8BQ9UHF3 227 aa9.28□□□□□ -0.92
CHRNB4-204ENST00000559849 HECTD4Q9Y4D8 3996 aa9.28□□□□□ -0.92
CHRNB4-204ENST00000559849 HIGD1CA8MV81 97 aa9.28□□□□□ -0.92
CHRNB4-204ENST00000559849 H7C1H1 209 aa9.28□□□□□ -0.92
CHRNB4-204ENST00000559849 C10orf126Q8N4M7 172 aa9.28□□□□□ -0.92
CHRNB4-204ENST00000559849 NUP35Q8NFH5 326 aa9.28□□□□□ -0.92
CHRNB4-204ENST00000559849 PGLYRP4Q96LB8 373 aa9.28□□□□□ -0.92
CHRNB4-204ENST00000559849 M0QY20 66 aa9.27□□□□□ -0.93
CHRNB4-204ENST00000559849 Q0VG73 95 aa9.27□□□□□ -0.93
CHRNB4-204ENST00000559849 OCIAD2Q56VL3 154 aa9.27□□□□□ -0.93
CHRNB4-204ENST00000559849 BORCS7Q96B45 105 aa9.27□□□□□ -0.93
CHRNB4-204ENST00000559849 SUMO4Q6EEV6 95 aa9.26□□□□□ -0.93
CHRNB4-204ENST00000559849 MRPL54Q6P161 138 aaKnown RBP9.26□□□□□ -0.93
CHRNB4-204ENST00000559849 NFE4Q86UQ8 179 aa9.26□□□□□ -0.93
CHRNB4-204ENST00000559849 DNAJC30Q96LL9 226 aa9.26□□□□□ -0.93
CHRNB4-204ENST00000559849 CST9LQ9H4G1 147 aa9.26□□□□□ -0.93
CHRNB4-204ENST00000559849 A0A1B0GVY2 172 aa9.25□□□□□ -0.93
CHRNB4-204ENST00000559849 K7ERU9 68 aa9.25□□□□□ -0.93
CHRNB4-204ENST00000559849 HNRNPA3P51991 378 aaKnown RBP9.25□□□□□ -0.93
CHRNB4-204ENST00000559849 TNP2Q05952 138 aa9.25□□□□□ -0.93
CHRNB4-204ENST00000559849 COX19Q49B96 90 aa9.25□□□□□ -0.93
CHRNB4-204ENST00000559849 TNFRSF18Q9Y5U5 241 aa9.25□□□□□ -0.93
CHRNB4-204ENST00000559849 A0A1B0GUT8 65 aa9.25□□□□□ -0.93
CHRNB4-204ENST00000559849 RASL11AQ6T310 242 aa9.25□□□□□ -0.93
CHRNB4-204ENST00000559849 DAZ4Q86SG3 579 aaKnown RBP9.25□□□□□ -0.93
CHRNB4-204ENST00000559849 DAZ3Q9NR90 486 aaKnown RBP9.25□□□□□ -0.93
CHRNB4-204ENST00000559849 PKD1P98161 4303 aa9.24□□□□□ -0.93
CHRNB4-204ENST00000559849 GNB1LQ9BYB4 327 aa9.24□□□□□ -0.93
CHRNB4-204ENST00000559849 BIRC6Q9NR09 4857 aa9.24□□□□□ -0.93
CHRNB4-204ENST00000559849 TRBV6-8A0A0A6YYG3 113 aa9.24□□□□□ -0.93
CHRNB4-204ENST00000559849 IBA57-AS1B1ANH7 110 aa9.24□□□□□ -0.93
CHRNB4-204ENST00000559849 IGHV3-30P01768 117 aa9.24□□□□□ -0.93
CHRNB4-204ENST00000559849 IGHV3-33P01772 117 aa9.24□□□□□ -0.93
CHRNB4-204ENST00000559849 IGHV3-30-3P0DP02 117 aa9.24□□□□□ -0.93
CHRNB4-204ENST00000559849 IGHV3-30-5P0DP03 117 aa9.24□□□□□ -0.93
CHRNB4-204ENST00000559849 TMEM97Q5BJF2 176 aa9.24□□□□□ -0.93
CHRNB4-204ENST00000559849 Q6ZN92 141 aa9.24□□□□□ -0.93
CHRNB4-204ENST00000559849 NUPR1O60356 82 aa9.23□□□□□ -0.93
CHRNB4-204ENST00000559849 MT-ND6P03923 174 aa9.23□□□□□ -0.93
CHRNB4-204ENST00000559849 IGLC3P0DOY3 106 aa9.23□□□□□ -0.93
CHRNB4-204ENST00000559849 Q6ZRN7 208 aaPredicted RBP9.23□□□□□ -0.93
CHRNB4-204ENST00000559849 TMEM136Q6ZRR5 245 aa9.23□□□□□ -0.93
CHRNB4-204ENST00000559849 ATP5L2Q7Z4Y8 100 aa9.23□□□□□ -0.93
CHRNB4-204ENST00000559849 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
CHRNB4-204ENST00000559849 SPATA45Q537H7 98 aa9.22□□□□□ -0.93
CHRNB4-204ENST00000559849 NIT1Q86X76 327 aa9.22□□□□□ -0.93
CHRNB4-204ENST00000559849 A0A1B0GXF2 115 aa9.21□□□□□ -0.93
CHRNB4-204ENST00000559849 HLA-DQA1P01909 254 aa9.21□□□□□ -0.93
CHRNB4-204ENST00000559849 RIGQ13278 110 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms