RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TIRAPP58753 221 aa8.23□□□□□ -1.09
PCAT29-201ENST00000558411 SIRPDQ9H106 197 aa8.23□□□□□ -1.09
PCAT29-201ENST00000558411 TRAV12-3A0A0B4J271 114 aa8.23□□□□□ -1.09
PCAT29-201ENST00000558411 RPL18AQ02543 176 aaKnown RBP8.23□□□□□ -1.09
PCAT29-201ENST00000558411 ZNF415Q09FC8 603 aa8.23□□□□□ -1.09
PCAT29-201ENST00000558411 C5orf56Q8N8D9 126 aa8.23□□□□□ -1.09
PCAT29-201ENST00000558411 LINC00308Q8TCZ7 52 aa8.23□□□□□ -1.09
PCAT29-201ENST00000558411 hADV29S1A0JD25 119 aa8.22□□□□□ -1.09
PCAT29-201ENST00000558411 DPH3Q96FX2 82 aa8.22□□□□□ -1.09
PCAT29-201ENST00000558411 C22orf24Q9Y442 160 aa8.22□□□□□ -1.09
PCAT29-201ENST00000558411 SMG1Q96Q15 3661 aaKnown RBP8.22□□□□□ -1.09
PCAT29-201ENST00000558411 ATMQ13315 3056 aa8.21□□□□□ -1.09
PCAT29-201ENST00000558411 ABCA4P78363 2273 aa8.21□□□□□ -1.1
PCAT29-201ENST00000558411 POLEQ07864 2286 aa8.21□□□□□ -1.1
PCAT29-201ENST00000558411 IGHV3OR16-10A0A075B7F0 116 aa8.21□□□□□ -1.1
PCAT29-201ENST00000558411 IGLV5-45A0A087WSX0 123 aa8.21□□□□□ -1.1
PCAT29-201ENST00000558411 SERP2Q8N6R1 65 aa8.21□□□□□ -1.1
PCAT29-201ENST00000558411 RHPN1-AS1Q9BWJ2 59 aa8.2□□□□□ -1.1
PCAT29-201ENST00000558411 PRORYQ9H606 182 aa8.2□□□□□ -1.1
PCAT29-201ENST00000558411 A8MZ25 164 aa8.2□□□□□ -1.1
PCAT29-201ENST00000558411 Q6JHZ5 121 aa8.2□□□□□ -1.1
PCAT29-201ENST00000558411 USMG5Q96IX5 58 aa8.2□□□□□ -1.1
PCAT29-201ENST00000558411 UBE2D4Q9Y2X8 147 aa8.2□□□□□ -1.1
PCAT29-201ENST00000558411 IGHV1OR15-1A0A075B7D0 117 aa8.19□□□□□ -1.1
PCAT29-201ENST00000558411 H3BUA1 57 aa8.19□□□□□ -1.1
PCAT29-201ENST00000558411 TRBV12-3P01733 135 aa8.19□□□□□ -1.1
PCAT29-201ENST00000558411 UPK3BQ9BT76 320 aa8.19□□□□□ -1.1
PCAT29-201ENST00000558411 LY6HO94772 140 aa8.18□□□□□ -1.1
PCAT29-201ENST00000558411 OVOL2Q9BRP0 275 aa8.18□□□□□ -1.1
PCAT29-201ENST00000558411 MOB4Q9Y3A3 225 aa8.18□□□□□ -1.1
PCAT29-201ENST00000558411 PF4V1P10720 104 aa8.18□□□□□ -1.1
PCAT29-201ENST00000558411 MALP21145 153 aa8.18□□□□□ -1.1
PCAT29-201ENST00000558411 ZFP36P26651 326 aaKnown RBP8.18□□□□□ -1.1
PCAT29-201ENST00000558411 SAA4P35542 130 aa8.18□□□□□ -1.1
PCAT29-201ENST00000558411 IGLV5-39A0A0G2JS06 123 aa8.17□□□□□ -1.1
PCAT29-201ENST00000558411 CHCHD7Q9BUK0 85 aa8.17□□□□□ -1.1
PCAT29-201ENST00000558411 TPRP12270 2363 aaKnown RBP8.17□□□□□ -1.1
PCAT29-201ENST00000558411 IGKV3-7A0A075B6H7 116 aa8.17□□□□□ -1.1
PCAT29-201ENST00000558411 PF4P02776 101 aa8.17□□□□□ -1.1
PCAT29-201ENST00000558411 PRIMA1Q86XR5 153 aa8.17□□□□□ -1.1
PCAT29-201ENST00000558411 Q8N2B8 174 aa8.17□□□□□ -1.1
PCAT29-201ENST00000558411 CDKN2A-AS1Q9UH64 79 aa8.17□□□□□ -1.1
PCAT29-201ENST00000558411 K7EMT4 169 aa8.16□□□□□ -1.1
PCAT29-201ENST00000558411 DNAL4O96015 105 aa8.16□□□□□ -1.1
PCAT29-201ENST00000558411 IGHG2P01859 326 aa8.16□□□□□ -1.1
PCAT29-201ENST00000558411 RNASE13Q5GAN3 156 aaKnown RBP8.16□□□□□ -1.1
PCAT29-201ENST00000558411 RNF152Q8N8N0 203 aa8.16□□□□□ -1.1
PCAT29-201ENST00000558411 LINC01560Q8TB33 94 aa8.16□□□□□ -1.1
PCAT29-201ENST00000558411 CYSTM1Q9H1C7 97 aa8.16□□□□□ -1.1
PCAT29-201ENST00000558411 CHD8Q9HCK8 2581 aa8.16□□□□□ -1.1
PCAT29-201ENST00000558411 NCOR2Q9Y618 2525 aa8.16□□□□□ -1.1
PCAT29-201ENST00000558411 FAM218AQ96MZ4 157 aa8.15□□□□□ -1.1
PCAT29-201ENST00000558411 Q9H8V8 135 aa8.15□□□□□ -1.1
PCAT29-201ENST00000558411 IGF2RP11717 2491 aa8.15□□□□□ -1.1
PCAT29-201ENST00000558411 RPL28P46779 137 aaKnown RBP8.15□□□□□ -1.11
PCAT29-201ENST00000558411 HIST2H2BCQ6DN03 193 aa8.15□□□□□ -1.11
PCAT29-201ENST00000558411 HIST2H2BDQ6DRA6 164 aa8.15□□□□□ -1.11
PCAT29-201ENST00000558411 C11orf71Q6IPW1 123 aa8.15□□□□□ -1.11
PCAT29-201ENST00000558411 SOSTDC1Q6X4U4 206 aa8.15□□□□□ -1.11
PCAT29-201ENST00000558411 KIR2DL5BQ8NHK3 375 aa8.15□□□□□ -1.11
PCAT29-201ENST00000558411 APC2O95996 2303 aa8.15□□□□□ -1.11
PCAT29-201ENST00000558411 TRAV13-1A0A0B4J241 112 aa8.14□□□□□ -1.11
PCAT29-201ENST00000558411 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
PCAT29-201ENST00000558411 KLRB1Q12918 225 aa8.14□□□□□ -1.11
PCAT29-201ENST00000558411 OBSCN-AS1Q96MR7 158 aa8.14□□□□□ -1.11
PCAT29-201ENST00000558411 ANKRD11Q6UB99 2663 aaPredicted RBP8.14□□□□□ -1.11
PCAT29-201ENST00000558411 RP1L1Q8IWN7 2480 aaPredicted RBP8.14□□□□□ -1.11
PCAT29-201ENST00000558411 FBXL19-AS1Q494R0 122 aa8.14□□□□□ -1.11
PCAT29-201ENST00000558411 PIK3CD-AS1Q5SR53 167 aa8.14□□□□□ -1.11
PCAT29-201ENST00000558411 FAM19A3Q7Z5A8 133 aa8.14□□□□□ -1.11
PCAT29-201ENST00000558411 TRAV12-2A0A075B6T6 113 aa8.13□□□□□ -1.11
PCAT29-201ENST00000558411 TRAV13-2A0A0B4J235 113 aa8.13□□□□□ -1.11
PCAT29-201ENST00000558411 MRAPQ8TCY5 172 aa8.13□□□□□ -1.11
PCAT29-201ENST00000558411 OXTP01178 125 aa8.12□□□□□ -1.11
PCAT29-201ENST00000558411 Q5XG85 94 aa8.12□□□□□ -1.11
PCAT29-201ENST00000558411 ACACAQ13085 2346 aa8.12□□□□□ -1.11
PCAT29-201ENST00000558411 BSNQ9UPA5 3926 aa8.12□□□□□ -1.11
PCAT29-201ENST00000558411 USP17L23D6RBM5 183 aa8.12□□□□□ -1.11
PCAT29-201ENST00000558411 ZNF625Q96I27 306 aaPredicted RBP8.12□□□□□ -1.11
PCAT29-201ENST00000558411 LINC00467Q9BRT7 94 aa8.12□□□□□ -1.11
PCAT29-201ENST00000558411 CACNA1AO00555 2505 aa8.11□□□□□ -1.11
PCAT29-201ENST00000558411 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.11□□□□□ -1.11
PCAT29-201ENST00000558411 IGKV2-29A2NJV5 120 aaPredicted RBP8.11□□□□□ -1.11
PCAT29-201ENST00000558411 F5H768 121 aa8.11□□□□□ -1.11
PCAT29-201ENST00000558411 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
PCAT29-201ENST00000558411 SYNJ2BPP57105 145 aa8.11□□□□□ -1.11
PCAT29-201ENST00000558411 SNRPD3P62318 126 aaKnown RBP8.11□□□□□ -1.11
PCAT29-201ENST00000558411 Q8NA96 180 aa8.11□□□□□ -1.11
PCAT29-201ENST00000558411 DSCR8Q96T75 97 aa8.11□□□□□ -1.11
PCAT29-201ENST00000558411 LINC01561Q8N1V8 128 aa8.11□□□□□ -1.11
PCAT29-201ENST00000558411 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.11□□□□□ -1.11
PCAT29-201ENST00000558411 IGKV3D-7A0A0C4DH55 119 aa8.1□□□□□ -1.11
PCAT29-201ENST00000558411 NDUFC2O95298 119 aa8.1□□□□□ -1.11
PCAT29-201ENST00000558411 SPINK13Q1W4C9 94 aa8.1□□□□□ -1.11
PCAT29-201ENST00000558411 Q9HAA7 133 aa8.1□□□□□ -1.11
PCAT29-201ENST00000558411 LINC00846Q9NV44 126 aa8.1□□□□□ -1.11
PCAT29-201ENST00000558411 PCNX1Q96RV3 2341 aa8.09□□□□□ -1.11
PCAT29-201ENST00000558411 SMIM1B2RUZ4 78 aa8.09□□□□□ -1.11
PCAT29-201ENST00000558411 K7ENP7 123 aa8.09□□□□□ -1.11
PCAT29-201ENST00000558411 COX6A2Q02221 97 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms