RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CSN1S1P47710 185 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 KRTDAPP60985 99 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 RPL23P62829 140 aaKnown RBP1.98□□□□□ -2.09
PRPF39-206ENST00000554429 QRFPP83859 136 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 CYCSP99999 105 aaKnown RBP1.98□□□□□ -2.09
PRPF39-206ENST00000554429 PRB3Q04118 309 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-206ENST00000554429 ICAM4Q14773 271 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 NMSQ5H8A3 153 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 FP248Q71RG6 208 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-206ENST00000554429 FAM19A2Q8N3H0 131 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 CMTM2Q8TAZ6 248 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 TSKUQ8WUA8 353 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 SPTSSAQ969W0 71 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 PYGO2Q9BRQ0 406 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 DPH3P1Q9H4G8 78 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 RYR3Q15413 4870 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 TGP01266 2768 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 IGHV3OR16-13A0A075B7E8 117 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 EPM2AB3EWF7 344 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 BUB1B-PAK6H3BSN5 160 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 M0R135 149 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 UPK2O00526 184 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 NDUFB3O43676 98 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF737O75373 536 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 IGKV1D-33P01593 117 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 IGKV1-33P01594 117 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 IGKV1-5P01602 117 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 SRP19P09132 144 aaKnown RBP1.98□□□□□ -2.09
PRPF39-206ENST00000554429 APELAP0DMC3 54 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 CXCL5P42830 114 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 EDDM3BP56851 147 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 FXYD3Q14802 87 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 SPATA12Q7Z6I5 190 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF329Q86UD4 541 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 TMEM252Q8N6L7 170 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 TOMM6Q96B49 74 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 VSIG2Q96IQ7 327 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 SCRT1Q9BWW7 348 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 BIRC6Q9NR09 4857 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 KMT2CQ8NEZ4 4911 aaKnown RBP1.98□□□□□ -2.09
PRPF39-206ENST00000554429 PSPHP1O15172 72 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 PPYP01298 95 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 GYPAP02724 150 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 IL3RAP26951 378 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 ASIPP42127 132 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 PMCHL1Q16048 86 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 C1orf100Q5SVJ3 147 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 GPHB5Q86YW7 130 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 PPDPFLQ8WWR9 84 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 LEAP2Q969E1 77 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF286AQ9HBT8 521 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 CELA1Q9UNI1 258 aa1.98□□□□□ -2.09
PRPF39-206ENST00000554429 RYR2Q92736 4967 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 IGHV3OR16-10A0A075B7F0 116 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 TRBV27A0A0K0K1C4 114 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 CRYM-AS1A6NIL9 109 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 SYS1-DBNDD2H3BUS1 97 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 TIMM17BO60830 172 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 SCGB1C2P0DMR2 95 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 IGHV1-8P0DP01 117 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 KRTAP10-11P60412 298 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 RBM3P98179 157 aaKnown RBP1.97□□□□□ -2.09
PRPF39-206ENST00000554429 KIAA0087Q14695 138 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 TWIST1Q15672 202 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 NKAPP1Q8N9T2 125 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 SPANXDQ9BXN6 97 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 Q9H3A6 140 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 LINC00574Q9H8X3 128 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 ALMS1Q8TCU4 4167 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 IGKV1D-17A0A075B6S4 117 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 TRBV6-7A0A0A0MS04 114 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 H3BUX3 64 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 NXPH4O95158 308 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 IGKCP01834 107 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 MGST1P10620 155 aaKnown RBP1.97□□□□□ -2.09
PRPF39-206ENST00000554429 CD28P10747 220 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF826PQ6ZT77 177 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 NFE4Q86UQ8 179 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 BAGE3Q86Y29 109 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 BAGE2Q86Y30 109 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 LYPD6Q86Y78 171 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 Q8N976 141 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 C15orf53Q8NAA6 179 aa1.97□□□□□ -2.09
PRPF39-206ENST00000554429 FGF23Q9GZV9 251 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-206ENST00000554429 TRBV24-1A0A075B6N3 115 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 TRAV9-2A0A087WT02 112 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 IGKV1-6A0A0C4DH72 117 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 K7EMI3 77 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 IGKV1-16P04430 117 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 FXYD7P58549 80 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 CIRBPQ14011 172 aaKnown RBP1.96□□□□□ -2.1
PRPF39-206ENST00000554429 LINC00242Q5T6M2 205 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 SOSTDC1Q6X4U4 206 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 AMN1Q8IY45 258 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 C18orf32Q8TCD1 76 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 MYOZ3Q8TDC0 251 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 ZNF714Q96N38 554 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 NPCDR1Q9BY65 106 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 CYSTM1Q9H1C7 97 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 SND1-IT1Q9HBX3 110 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms