RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 Q6ZSV7 163 aa10.43□□□□□ -0.74
LIG1-203ENST00000536218 LINC00526Q96FQ7 95 aa10.43□□□□□ -0.74
LIG1-203ENST00000536218 hADV29S1A0JD25 119 aa10.42□□□□□ -0.74
LIG1-203ENST00000536218 IGHG2P01859 326 aa10.42□□□□□ -0.74
LIG1-203ENST00000536218 LINC01356Q8N9X3 169 aa10.42□□□□□ -0.74
LIG1-203ENST00000536218 NOTCH2Q04721 2471 aa10.42□□□□□ -0.74
LIG1-203ENST00000536218 PRRC2AP48634 2157 aaKnown RBP10.42□□□□□ -0.74
LIG1-203ENST00000536218 TEX15Q9BXT5 2789 aa10.42□□□□□ -0.74
LIG1-203ENST00000536218 UBR5O95071 2799 aaPredicted RBP10.42□□□□□ -0.74
LIG1-203ENST00000536218 AMELXQ99217 191 aa10.42□□□□□ -0.74
LIG1-203ENST00000536218 ICOSQ9Y6W8 199 aa10.42□□□□□ -0.74
LIG1-203ENST00000536218 TRAV12-3A0A0B4J271 114 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 TRBV30A0A0K0K1B3 111 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 FAM223BA6NKX1 122 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 DSCR9P59020 149 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 C10orf99Q6UWK7 81 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 FAM223AQ8IWN6 122 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 FAM240AA0A1B0GVK7 77 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 H3BT86 120 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 DEFB1P60022 68 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 C19orf54Q5BKX5 351 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 C16orf92Q96LL3 132 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 DUX5Q96PT3 197 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 PHLDA3Q9Y5J5 127 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 MYO9AB2RTY4 2548 aa10.41□□□□□ -0.74
LIG1-203ENST00000536218 F5H768 121 aa10.4□□□□□ -0.74
LIG1-203ENST00000536218 IGF1P05019 195 aa10.4□□□□□ -0.74
LIG1-203ENST00000536218 OPRPNQ99935 248 aaPredicted RBP10.4□□□□□ -0.74
LIG1-203ENST00000536218 KIR2DL5BQ8NHK3 375 aa10.4□□□□□ -0.75
LIG1-203ENST00000536218 DPH3P1Q9H4G8 78 aa10.4□□□□□ -0.75
LIG1-203ENST00000536218 A0A1B0GX51 115 aa10.39□□□□□ -0.75
LIG1-203ENST00000536218 RS1O15537 224 aa10.39□□□□□ -0.75
LIG1-203ENST00000536218 ZNF580Q9UK33 172 aa10.39□□□□□ -0.75
LIG1-203ENST00000536218 MXRA5Q9NR99 2828 aa10.39□□□□□ -0.75
LIG1-203ENST00000536218 C4orf26Q17RF5 130 aa10.39□□□□□ -0.75
LIG1-203ENST00000536218 KLK9Q2XQG4 91 aa10.39□□□□□ -0.75
LIG1-203ENST00000536218 HRCT1Q6UXD1 115 aa10.39□□□□□ -0.75
LIG1-203ENST00000536218 KLK9Q9UKQ9 250 aa10.39□□□□□ -0.75
LIG1-203ENST00000536218 TMEM223A0PJW6 202 aa10.38□□□□□ -0.75
LIG1-203ENST00000536218 WIPF1O43516 503 aa10.38□□□□□ -0.75
LIG1-203ENST00000536218 HIST2H2BCQ6DN03 193 aa10.38□□□□□ -0.75
LIG1-203ENST00000536218 SMCR5Q8TEV8 140 aa10.38□□□□□ -0.75
LIG1-203ENST00000536218 CHD6Q8TD26 2715 aa10.38□□□□□ -0.75
LIG1-203ENST00000536218 SORL1Q92673 2214 aa10.38□□□□□ -0.75
LIG1-203ENST00000536218 COX7CP15954 63 aa10.38□□□□□ -0.75
LIG1-203ENST00000536218 EDN2P20800 178 aa10.37□□□□□ -0.75
LIG1-203ENST00000536218 IMUPQ9GZP8 106 aa10.37□□□□□ -0.75
LIG1-203ENST00000536218 IGIPA6NJ69 53 aa10.37□□□□□ -0.75
LIG1-203ENST00000536218 F5H697 171 aa10.36□□□□□ -0.75
LIG1-203ENST00000536218 NSUN5P1Q3KNT7 163 aa10.36□□□□□ -0.75
LIG1-203ENST00000536218 DSCR8Q96T75 97 aa10.36□□□□□ -0.75
LIG1-203ENST00000536218 A0A096LNT2 108 aa10.36□□□□□ -0.75
LIG1-203ENST00000536218 TRACP01848 142 aa10.36□□□□□ -0.75
LIG1-203ENST00000536218 USMG5Q96IX5 58 aa10.36□□□□□ -0.75
LIG1-203ENST00000536218 U3KQE9 123 aa10.36□□□□□ -0.75
LIG1-203ENST00000536218 RHOHQ15669 191 aa10.36□□□□□ -0.75
LIG1-203ENST00000536218 C20orf173Q96LM9 149 aa10.36□□□□□ -0.75
LIG1-203ENST00000536218 CYSTM1Q9H1C7 97 aa10.36□□□□□ -0.75
LIG1-203ENST00000536218 APCP25054 2843 aa10.35□□□□□ -0.75
LIG1-203ENST00000536218 IGHV4-4A0A075B6R2 117 aa10.35□□□□□ -0.75
LIG1-203ENST00000536218 LEPROTO15243 131 aa10.35□□□□□ -0.75
LIG1-203ENST00000536218 PRR9Q5T870 116 aa10.35□□□□□ -0.75
LIG1-203ENST00000536218 LINC00643Q86TS7 51 aa10.35□□□□□ -0.75
LIG1-203ENST00000536218 NOTCH3Q9UM47 2321 aa10.35□□□□□ -0.75
LIG1-203ENST00000536218 NDUFA4O00483 81 aa10.35□□□□□ -0.75
LIG1-203ENST00000536218 NBPF19A0A087WUL8 3843 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 A0A0J9YXY3 114 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 F6UB75 175 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 I3L3M4 83 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 Q96MF0 132 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 LST1O00453 97 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 RHPN1-AS1Q9BWJ2 59 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 ACANP16112 2415 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 OVOL1O14753 267 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 IGHV4-31P0DP07 118 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 DEFB113Q30KQ7 82 aa10.34□□□□□ -0.75
LIG1-203ENST00000536218 TRAV13-1A0A0B4J241 112 aa10.33□□□□□ -0.76
LIG1-203ENST00000536218 IGLV1-40P01703 118 aa10.33□□□□□ -0.76
LIG1-203ENST00000536218 TMEM141Q96I45 108 aa10.33□□□□□ -0.76
LIG1-203ENST00000536218 LINC01600Q96MT4 127 aa10.33□□□□□ -0.76
LIG1-203ENST00000536218 GPHB5Q86YW7 130 aa10.33□□□□□ -0.76
LIG1-203ENST00000536218 A0A0J9YXV3 536 aa10.32□□□□□ -0.76
LIG1-203ENST00000536218 RNF152Q8N8N0 203 aa10.32□□□□□ -0.76
LIG1-203ENST00000536218 ACYP1P07311 99 aa10.32□□□□□ -0.76
LIG1-203ENST00000536218 RPS28P62857 69 aaKnown RBP10.32□□□□□ -0.76
LIG1-203ENST00000536218 DEFB121Q5J5C9 76 aa10.32□□□□□ -0.76
LIG1-203ENST00000536218 A0A087WWL8 130 aa10.32□□□□□ -0.76
LIG1-203ENST00000536218 GNRH2O43555 120 aa10.32□□□□□ -0.76
LIG1-203ENST00000536218 H3BUA1 57 aa10.31□□□□□ -0.76
LIG1-203ENST00000536218 ADAMTSL4-AS1Q5T5F5 129 aa10.31□□□□□ -0.76
LIG1-203ENST00000536218 DPH3Q96FX2 82 aa10.31□□□□□ -0.76
LIG1-203ENST00000536218 JPT2Q9H910 190 aa10.31□□□□□ -0.76
LIG1-203ENST00000536218 ZNF469Q96JG9 3925 aaPredicted RBP10.31□□□□□ -0.76
LIG1-203ENST00000536218 CRYGAP11844 174 aa10.31□□□□□ -0.76
LIG1-203ENST00000536218 HIST2H2BDQ6DRA6 164 aa10.31□□□□□ -0.76
LIG1-203ENST00000536218 SDHAF1A6NFY7 115 aa10.3□□□□□ -0.76
LIG1-203ENST00000536218 J3QLI3 93 aa10.3□□□□□ -0.76
LIG1-203ENST00000536218 PPP1R17O96001 155 aa10.3□□□□□ -0.76
LIG1-203ENST00000536218 C9orf139Q6ZV77 190 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms