RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 CACNG7P62955 275 aa9.2□□□□□ -0.94
CPSF1-201ENST00000526271 NUP35Q8NFH5 326 aa9.2□□□□□ -0.94
CPSF1-201ENST00000526271 UBE2WQ96B02 151 aa9.2□□□□□ -0.94
CPSF1-201ENST00000526271 TMEM242Q9NWH2 141 aa9.2□□□□□ -0.94
CPSF1-201ENST00000526271 A0A087WWC5 75 aa9.19□□□□□ -0.94
CPSF1-201ENST00000526271 SPANXN1Q5VSR9 72 aa9.19□□□□□ -0.94
CPSF1-201ENST00000526271 KRTAP26-1Q6PEX3 210 aa9.19□□□□□ -0.94
CPSF1-201ENST00000526271 SVBPQ8N300 66 aa9.19□□□□□ -0.94
CPSF1-201ENST00000526271 PGLYRP4Q96LB8 373 aa9.19□□□□□ -0.94
CPSF1-201ENST00000526271 TPPP3Q9BW30 176 aa9.19□□□□□ -0.94
CPSF1-201ENST00000526271 NAT8BQ9UHF3 227 aa9.19□□□□□ -0.94
CPSF1-201ENST00000526271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.19□□□□□ -0.94
CPSF1-201ENST00000526271 RNF213Q63HN8 5207 aa9.19□□□□□ -0.94
CPSF1-201ENST00000526271 MUC21A0A0G2JKD1 596 aa9.18□□□□□ -0.94
CPSF1-201ENST00000526271 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
CPSF1-201ENST00000526271 M0R381 172 aa9.18□□□□□ -0.94
CPSF1-201ENST00000526271 RHODO00212 210 aa9.18□□□□□ -0.94
CPSF1-201ENST00000526271 SNAPINO95295 136 aa9.18□□□□□ -0.94
CPSF1-201ENST00000526271 NTF3P20783 257 aa9.18□□□□□ -0.94
CPSF1-201ENST00000526271 RHEBQ15382 184 aa9.18□□□□□ -0.94
CPSF1-201ENST00000526271 IMMP2LQ96T52 175 aa9.18□□□□□ -0.94
CPSF1-201ENST00000526271 A0A087WWL8 130 aa9.17□□□□□ -0.94
CPSF1-201ENST00000526271 UBE2D3P61077 147 aa9.17□□□□□ -0.94
CPSF1-201ENST00000526271 UBE2D2P62837 147 aa9.17□□□□□ -0.94
CPSF1-201ENST00000526271 COX11Q9Y6N1 276 aa9.17□□□□□ -0.94
CPSF1-201ENST00000526271 A0A1B0GUT8 65 aa9.16□□□□□ -0.94
CPSF1-201ENST00000526271 PRSS1P07477 247 aa9.16□□□□□ -0.94
CPSF1-201ENST00000526271 SSTP61278 116 aa9.16□□□□□ -0.94
CPSF1-201ENST00000526271 RPL37AP61513 92 aaKnown RBP9.16□□□□□ -0.94
CPSF1-201ENST00000526271 RPS10P5Q9NQ39 176 aa9.16□□□□□ -0.94
CPSF1-201ENST00000526271 KIF25-AS1Q9Y6Z4 181 aa9.16□□□□□ -0.94
CPSF1-201ENST00000526271 URGCP-MRPS24S4R325 110 aa9.16□□□□□ -0.94
CPSF1-201ENST00000526271 TWIST1Q15672 202 aa9.15□□□□□ -0.94
CPSF1-201ENST00000526271 MPV17L2Q567V2 206 aa9.15□□□□□ -0.94
CPSF1-201ENST00000526271 FAM74A4Q5TZK3 123 aa9.15□□□□□ -0.94
CPSF1-201ENST00000526271 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
CPSF1-201ENST00000526271 RIGQ13278 110 aa9.14□□□□□ -0.95
CPSF1-201ENST00000526271 KCNIP4Q6PIL6 250 aa9.14□□□□□ -0.95
CPSF1-201ENST00000526271 BORCS7Q96B45 105 aa9.14□□□□□ -0.95
CPSF1-201ENST00000526271 RMI2Q96E14 147 aa9.14□□□□□ -0.95
CPSF1-201ENST00000526271 TRGC1P0CF51 173 aa9.13□□□□□ -0.95
CPSF1-201ENST00000526271 ODF1Q14990 250 aa9.13□□□□□ -0.95
CPSF1-201ENST00000526271 NTM-AS1Q6ZSK4 140 aa9.13□□□□□ -0.95
CPSF1-201ENST00000526271 AP1S3Q96PC3 154 aa9.13□□□□□ -0.95
CPSF1-201ENST00000526271 CHCHD7Q9BUK0 85 aa9.13□□□□□ -0.95
CPSF1-201ENST00000526271 A0A1B0GW15 77 aa9.12□□□□□ -0.95
CPSF1-201ENST00000526271 A0A1B0GXF2 115 aa9.12□□□□□ -0.95
CPSF1-201ENST00000526271 ATP5L2Q7Z4Y8 100 aa9.12□□□□□ -0.95
CPSF1-201ENST00000526271 C9orf163Q8N9P6 203 aa9.12□□□□□ -0.95
CPSF1-201ENST00000526271 NEXN-AS1Q8NBZ9 246 aa9.12□□□□□ -0.95
CPSF1-201ENST00000526271 TMEM191AQ9H0A3 160 aa9.12□□□□□ -0.95
CPSF1-201ENST00000526271 TRAV9-1A0A075B6T8 112 aa9.11□□□□□ -0.95
CPSF1-201ENST00000526271 TRBV6-8A0A0A6YYG3 113 aa9.11□□□□□ -0.95
CPSF1-201ENST00000526271 TRBV10-1A0A0K0K1A3 114 aa9.11□□□□□ -0.95
CPSF1-201ENST00000526271 SMIM17P0DL12 118 aa9.11□□□□□ -0.95
CPSF1-201ENST00000526271 RPL36AP83881 106 aaKnown RBP9.11□□□□□ -0.95
CPSF1-201ENST00000526271 SDIM1Q6ZPB5 146 aa9.11□□□□□ -0.95
CPSF1-201ENST00000526271 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.11□□□□□ -0.95
CPSF1-201ENST00000526271 GATD1Q8NB37 220 aa9.11□□□□□ -0.95
CPSF1-201ENST00000526271 RPL36ALQ969Q0 106 aaKnown RBP9.11□□□□□ -0.95
CPSF1-201ENST00000526271 BTF3L4Q96K17 158 aa9.11□□□□□ -0.95
CPSF1-201ENST00000526271 DPH3P1Q9H4G8 78 aa9.11□□□□□ -0.95
CPSF1-201ENST00000526271 TRBV7-3A0A075B6L6 115 aa9.1□□□□□ -0.95
CPSF1-201ENST00000526271 A0A087WX48 190 aa9.1□□□□□ -0.95
CPSF1-201ENST00000526271 SLPIP03973 132 aa9.1□□□□□ -0.95
CPSF1-201ENST00000526271 RAB4BP61018 213 aa9.1□□□□□ -0.95
CPSF1-201ENST00000526271 ELOBQ15370 118 aa9.1□□□□□ -0.95
CPSF1-201ENST00000526271 SMIM15Q7Z3B0 74 aa9.1□□□□□ -0.95
CPSF1-201ENST00000526271 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
CPSF1-201ENST00000526271 S100PP25815 95 aa9.09□□□□□ -0.95
CPSF1-201ENST00000526271 HBBP68871 147 aa9.09□□□□□ -0.95
CPSF1-201ENST00000526271 Q0VG73 95 aa9.09□□□□□ -0.95
CPSF1-201ENST00000526271 CIRBPQ14011 172 aaKnown RBP9.09□□□□□ -0.95
CPSF1-201ENST00000526271 MRPL54Q6P161 138 aaKnown RBP9.09□□□□□ -0.95
CPSF1-201ENST00000526271 PRR34Q9NV39 138 aa9.09□□□□□ -0.95
CPSF1-201ENST00000526271 HLA-DQA1P01909 254 aa9.08□□□□□ -0.96
CPSF1-201ENST00000526271 S100A8P05109 93 aa9.08□□□□□ -0.96
CPSF1-201ENST00000526271 RAB4AP20338 218 aa9.08□□□□□ -0.96
CPSF1-201ENST00000526271 CAMPP49913 170 aa9.08□□□□□ -0.96
CPSF1-201ENST00000526271 RASL11AQ6T310 242 aa9.08□□□□□ -0.96
CPSF1-201ENST00000526271 CLPSL2Q6UWE3 100 aa9.08□□□□□ -0.96
CPSF1-201ENST00000526271 RNF185Q96GF1 192 aa9.08□□□□□ -0.96
CPSF1-201ENST00000526271 YPEL4Q96NS1 127 aa9.08□□□□□ -0.96
CPSF1-201ENST00000526271 S100A1P23297 94 aa9.07□□□□□ -0.96
CPSF1-201ENST00000526271 FAM104BQ5XKR9 115 aa9.07□□□□□ -0.96
CPSF1-201ENST00000526271 TRBV24-1A0A075B6N3 115 aa9.06□□□□□ -0.96
CPSF1-201ENST00000526271 TMEM262E9PQX1 116 aa9.06□□□□□ -0.96
CPSF1-201ENST00000526271 F5H697 171 aa9.06□□□□□ -0.96
CPSF1-201ENST00000526271 M0QY20 66 aa9.06□□□□□ -0.96
CPSF1-201ENST00000526271 ATP6V1G1O75348 118 aa9.06□□□□□ -0.96
CPSF1-201ENST00000526271 ANGP03950 147 aaKnown RBP9.06□□□□□ -0.96
CPSF1-201ENST00000526271 MGPP08493 103 aa9.06□□□□□ -0.96
CPSF1-201ENST00000526271 ZNF56Q15929 161 aa9.06□□□□□ -0.96
CPSF1-201ENST00000526271 C14orf177Q52M58 125 aa9.06□□□□□ -0.96
CPSF1-201ENST00000526271 SUMO4Q6EEV6 95 aa9.06□□□□□ -0.96
CPSF1-201ENST00000526271 SMCO4Q9NRQ5 59 aa9.06□□□□□ -0.96
CPSF1-201ENST00000526271 CHTF8P0CG12 524 aa9.05□□□□□ -0.96
CPSF1-201ENST00000526271 PKIAP61925 76 aa9.05□□□□□ -0.96
CPSF1-201ENST00000526271 RBX1P62877 108 aa9.05□□□□□ -0.96
CPSF1-201ENST00000526271 DGAT2L7PQ6IED9 249 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms