RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SLC25A16P16260 332 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 NPPCP23582 126 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 IFI27P40305 119 aaPredicted RBP2.2□□□□□ -2.06
SKP1-208ENST00000521216 KLKP1Q107X0 134 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 Q1T7F1 81 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 ARL17AQ8IVW1 177 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 CLECL1Q8IZS7 167 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 DAND5Q8N907 189 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 SPTSSAQ969W0 71 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 SLC50A1Q9BRV3 221 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 TP73-AS1Q9UF72 201 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 LINC00588Q9Y4M8 146 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 THSD7AQ9UPZ6 1657 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 MED12LQ86YW9 2145 aa2.2□□□□□ -2.06
SKP1-208ENST00000521216 PTPRBP23467 1997 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 PLXNB2O15031 1838 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 COL18A1P39060 1754 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.19□□□□□ -2.06
SKP1-208ENST00000521216 A0A1W2PQD3 144 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 A8MUN3 132 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 H7BZZ5 65 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 TMEM256-PLSCR3K7ERE1 68 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 M0R381 172 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 MP68P56378 58 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 ATP5EP2Q5VTU8 51 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 Q6JHZ5 121 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 DYNLRB2Q8TF09 96 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 ZNF714Q96N38 554 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 MRPL35Q9NZE8 188 aaKnown RBP2.19□□□□□ -2.06
SKP1-208ENST00000521216 GREB1Q4ZG55 1949 aa2.19□□□□□ -2.06
SKP1-208ENST00000521216 UBR3Q6ZT12 1888 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 TRBV30A0A0K0K1B3 111 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 TRBV10-3A0A0K0K1G6 114 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 LINC01549A6NIU2 74 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 A8MWP4 228 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 COX7A2LO14548 114 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 PSCAO43653 123 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 CTSGP08311 255 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 S100A4P26447 101 aaKnown RBP2.18□□□□□ -2.06
SKP1-208ENST00000521216 PLNP26678 52 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 ZNF80P51504 273 aaPredicted RBP2.18□□□□□ -2.06
SKP1-208ENST00000521216 ASB16-AS1Q495Z4 193 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 ATP11AUNQ6ZP68 121 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 C7orf65Q6ZTY9 151 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 LYPD6Q86Y78 171 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 RNASE6Q93091 150 aaKnown RBP2.18□□□□□ -2.06
SKP1-208ENST00000521216 DIRC1Q969H9 104 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 HIGD2AQ9BW72 106 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 PRO1854Q9UHT4 67 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 PLXNB3Q9ULL4 1909 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 MYO16Q9Y6X6 1858 aa2.18□□□□□ -2.06
SKP1-208ENST00000521216 ANAPC1Q9H1A4 1944 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 TRAV7A0A075B6U4 112 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 TRBV7-1A0A0A6YYK4 115 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 IGHV3-43A0A0B4J1X8 118 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 A0A1B0GW54 56 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 LINC01546A6NGU7 62 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 TMEM14DPA8MWL7 114 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 C19orf84I3L1E1 186 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 ERC2-IT1O76042 136 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 HMGN2P05204 90 aaKnown RBP2.17□□□□□ -2.06
SKP1-208ENST00000521216 COX6CP09669 75 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 CCL4P13236 92 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 XCL1P47992 114 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 RBM3P98179 157 aaKnown RBP2.17□□□□□ -2.06
SKP1-208ENST00000521216 SS18Q15532 418 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 RHOHQ15669 191 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 ESRGQ1W209 222 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 MRPL51Q4U2R6 128 aaKnown RBP2.17□□□□□ -2.06
SKP1-208ENST00000521216 S100A7L2Q5SY68 101 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.17□□□□□ -2.06
SKP1-208ENST00000521216 C2orf82Q6UX34 121 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 LYZL2Q7Z4W2 148 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 TIMM21Q9BVV7 248 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 CYSTM1Q9H1C7 97 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 MGAMO43451 1857 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 NUP98P52948 1817 aa2.17□□□□□ -2.06
SKP1-208ENST00000521216 SSC5DA1L4H1 1573 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 TMSB15BA0A087X1C1 80 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 TEX49A0A1B0GTD5 131 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 A6NED7 52 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 IQCF6A8MYZ5 107 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 LTAP01374 205 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 IGLV3-27P01718 113 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 PIRTP0C851 137 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 CIRBPQ14011 172 aaKnown RBP2.16□□□□□ -2.06
SKP1-208ENST00000521216 PLGLAQ15195 96 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 KISS1Q15726 138 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 ZNF826PQ6ZT77 177 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 FAM19A3Q7Z5A8 133 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 VMO1Q7Z5L0 202 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 TMEM167BQ9NRX6 74 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 KIAA1549Q9HCM3 1950 aa2.16□□□□□ -2.06
SKP1-208ENST00000521216 PTPRSQ13332 1948 aa2.15□□□□□ -2.06
SKP1-208ENST00000521216 KIAA1549LQ6ZVL6 1849 aa2.15□□□□□ -2.06
SKP1-208ENST00000521216 TNS1Q9HBL0 1735 aaKnown RBP2.15□□□□□ -2.07
SKP1-208ENST00000521216 IGLV3-32A0A0A0MS00 114 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 IGKV1D-43A0A0B4J1Z2 117 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 LOC730098B7Z3J9 87 aa2.15□□□□□ -2.07
SKP1-208ENST00000521216 SH2D1AO60880 128 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms