RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 CFAP46Q8IYW2 2715 aa1.19□□□□□ -2.22
SGCB-203ENST00000514133 ABCA1O95477 2261 aa1.19□□□□□ -2.22
SGCB-203ENST00000514133 FBN2P35556 2912 aa1.19□□□□□ -2.22
SGCB-203ENST00000514133 NWD1Q149M9 1564 aa1.18□□□□□ -2.22
SGCB-203ENST00000514133 RBAKDNA6NC62 111 aa1.18□□□□□ -2.22
SGCB-203ENST00000514133 GNG4P50150 75 aa1.18□□□□□ -2.22
SGCB-203ENST00000514133 UBE2D1P51668 147 aa1.18□□□□□ -2.22
SGCB-203ENST00000514133 ELOF1P60002 83 aaKnown RBP1.18□□□□□ -2.22
SGCB-203ENST00000514133 SSBP1Q04837 148 aaKnown RBP1.18□□□□□ -2.22
SGCB-203ENST00000514133 FAM74A4Q5TZK3 123 aa1.18□□□□□ -2.22
SGCB-203ENST00000514133 C4orf33Q8N1A6 199 aa1.18□□□□□ -2.22
SGCB-203ENST00000514133 Q8N8P6 123 aa1.18□□□□□ -2.22
SGCB-203ENST00000514133 COX7B2Q8TF08 81 aa1.18□□□□□ -2.22
SGCB-203ENST00000514133 DSCR8Q96T75 97 aa1.18□□□□□ -2.22
SGCB-203ENST00000514133 ROBO1Q9Y6N7 1651 aa1.18□□□□□ -2.22
SGCB-203ENST00000514133 SPTBN5Q9NRC6 3674 aaKnown RBP1.18□□□□□ -2.22
SGCB-203ENST00000514133 IFT140Q96RY7 1462 aa1.18□□□□□ -2.22
SGCB-203ENST00000514133 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
SGCB-203ENST00000514133 DNAH12Q6ZR08 3092 aa1.17□□□□□ -2.22
SGCB-203ENST00000514133 RYR3Q15413 4870 aa1.17□□□□□ -2.22
SGCB-203ENST00000514133 PPP3R1P63098 170 aa1.17□□□□□ -2.22
SGCB-203ENST00000514133 C9orf153Q5TBE3 101 aa1.17□□□□□ -2.22
SGCB-203ENST00000514133 PPP3R2Q96LZ3 170 aa1.17□□□□□ -2.22
SGCB-203ENST00000514133 CRCT1Q9UGL9 99 aa1.17□□□□□ -2.22
SGCB-203ENST00000514133 SCRIBQ14160 1630 aa1.17□□□□□ -2.22
SGCB-203ENST00000514133 CHD1O14646 1710 aa1.17□□□□□ -2.22
SGCB-203ENST00000514133 KIAA0556O60303 1618 aa1.16□□□□□ -2.22
SGCB-203ENST00000514133 TNS1Q9HBL0 1735 aaKnown RBP1.16□□□□□ -2.22
SGCB-203ENST00000514133 K7EIL1 84 aa1.16□□□□□ -2.22
SGCB-203ENST00000514133 TNFP01375 233 aa1.16□□□□□ -2.22
SGCB-203ENST00000514133 S100PP25815 95 aa1.16□□□□□ -2.22
SGCB-203ENST00000514133 SPINK13Q1W4C9 94 aa1.16□□□□□ -2.22
SGCB-203ENST00000514133 KNTC1P50748 2209 aa1.16□□□□□ -2.22
SGCB-203ENST00000514133 SIPA1L3O60292 1781 aaPredicted RBP1.16□□□□□ -2.22
SGCB-203ENST00000514133 CASKIN1Q8WXD9 1431 aa1.15□□□□□ -2.22
SGCB-203ENST00000514133 MAP1BP46821 2468 aaKnown RBP1.15□□□□□ -2.22
SGCB-203ENST00000514133 BIVM-ERCC5R4GMW8 1640 aa1.15□□□□□ -2.22
SGCB-203ENST00000514133 TRBV7-1A0A0A6YYK4 115 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 TRAV13-2A0A0B4J235 113 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 OOSP1A8MZH6 123 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 HCG22E2RYF7 251 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 FXYD6P3P58550 94 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 CCL8P80075 99 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 ZNF818PQ6ZRF7 136 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 V9GYV3 84 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 PREX1Q8TCU6 1659 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 TANC1Q9C0D5 1861 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 NAV3Q8IVL0 2385 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 POLQO75417 2590 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 UTRNP46939 3433 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 ATRQ13535 2644 aa1.15□□□□□ -2.23
SGCB-203ENST00000514133 MKI67P46013 3256 aaKnown RBP1.14□□□□□ -2.23
SGCB-203ENST00000514133 NBEAL2Q6ZNJ1 2754 aa1.14□□□□□ -2.23
SGCB-203ENST00000514133 BPTFQ12830 3046 aa1.14□□□□□ -2.23
SGCB-203ENST00000514133 NRKQ7Z2Y5 1582 aa1.14□□□□□ -2.23
SGCB-203ENST00000514133 LAMC3Q9Y6N6 1575 aa1.14□□□□□ -2.23
SGCB-203ENST00000514133 SHANK2Q9UPX8 1470 aa1.14□□□□□ -2.23
SGCB-203ENST00000514133 C20orf202A1L168 122 aa1.14□□□□□ -2.23
SGCB-203ENST00000514133 C8orf59Q8N0T1 100 aaPredicted RBP1.14□□□□□ -2.23
SGCB-203ENST00000514133 AQP10Q96PS8 301 aa1.14□□□□□ -2.23
SGCB-203ENST00000514133 LINC00312Q9Y6C7 94 aa1.14□□□□□ -2.23
SGCB-203ENST00000514133 PRDM2Q13029 1718 aa1.14□□□□□ -2.23
SGCB-203ENST00000514133 PDZD2O15018 2839 aa1.14□□□□□ -2.23
SGCB-203ENST00000514133 PZPP20742 1482 aa1.13□□□□□ -2.23
SGCB-203ENST00000514133 MRC2Q9UBG0 1479 aa1.13□□□□□ -2.23
SGCB-203ENST00000514133 PSME4Q14997 1843 aa1.13□□□□□ -2.23
SGCB-203ENST00000514133 A0A087WTM6 91 aa1.13□□□□□ -2.23
SGCB-203ENST00000514133 EDDM3BP56851 147 aa1.13□□□□□ -2.23
SGCB-203ENST00000514133 SVBPQ8N300 66 aa1.13□□□□□ -2.23
SGCB-203ENST00000514133 MAPKBP1O60336 1514 aa1.13□□□□□ -2.23
SGCB-203ENST00000514133 FLNCQ14315 2725 aa1.13□□□□□ -2.23
SGCB-203ENST00000514133 CPSF1Q10570 1443 aaKnown RBP1.13□□□□□ -2.23
SGCB-203ENST00000514133 BIRC6Q9NR09 4857 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 LRRC37A3O60309 1634 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 CUX1P39880 1505 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 URB2Q14146 1524 aaKnown RBP1.12□□□□□ -2.23
SGCB-203ENST00000514133 EHBP1L1Q8N3D4 1523 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 CLPSL1A2RUU4 121 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 SIX6O95475 246 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 ZNF137PP52743 207 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 RPL37P61927 97 aaKnown RBP1.12□□□□□ -2.23
SGCB-203ENST00000514133 C6orf52Q5T4I8 152 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 GTF2H5Q6ZYL4 71 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 C12orf57Q99622 126 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 TCEAL7Q9BRU2 100 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 IER3IP1Q9Y5U9 82 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 TENM1Q9UKZ4 2725 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
SGCB-203ENST00000514133 F5P12259 2224 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 RELNP78509 3460 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 GAPVD1Q14C86 1478 aa1.12□□□□□ -2.23
SGCB-203ENST00000514133 KIF21BO75037 1637 aa1.11□□□□□ -2.23
SGCB-203ENST00000514133 TEX15Q9BXT5 2789 aa1.11□□□□□ -2.23
SGCB-203ENST00000514133 DNHD1Q96M86 4753 aa1.11□□□□□ -2.23
SGCB-203ENST00000514133 F2Z2F3 143 aa1.11□□□□□ -2.23
SGCB-203ENST00000514133 ATP6V1G2-DDX39BF2Z307 99 aa1.11□□□□□ -2.23
SGCB-203ENST00000514133 SPINK9Q5DT21 86 aa1.11□□□□□ -2.23
SGCB-203ENST00000514133 C10orf128Q5T292 105 aa1.11□□□□□ -2.23
SGCB-203ENST00000514133 SPANXDQ9BXN6 97 aa1.11□□□□□ -2.23
SGCB-203ENST00000514133 DIP2BQ9P265 1576 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms