RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
SGCB-203ENST00000514133 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
SGCB-203ENST00000514133 SENP3Q9H4L4 574 aaPredicted RBP15.06■□□□□ 0
SGCB-203ENST00000514133 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
SGCB-203ENST00000514133 FOXD1Q16676 465 aa13.86□□□□□ -0.19
SGCB-203ENST00000514133 PLPPR3Q6T4P5 718 aa13.73□□□□□ -0.21
SGCB-203ENST00000514133 PPP6R1Q9UPN7 881 aa13.08□□□□□ -0.32
SGCB-203ENST00000514133 MSH5O43196 834 aa13.06□□□□□ -0.32
SGCB-203ENST00000514133 ADRA2BP18089 450 aa13.05□□□□□ -0.32
SGCB-203ENST00000514133 PIAS4Q8N2W9 510 aaPredicted RBP13.04□□□□□ -0.32
SGCB-203ENST00000514133 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
SGCB-203ENST00000514133 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
SGCB-203ENST00000514133 PPP4R3CPQ6ZMV5 832 aa11.97□□□□□ -0.49
SGCB-203ENST00000514133 DMRT2Q9Y5R5 561 aa11.94□□□□□ -0.5
SGCB-203ENST00000514133 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
SGCB-203ENST00000514133 CNKSR2Q8WXI2 1034 aa11.78□□□□□ -0.52
SGCB-203ENST00000514133 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
SGCB-203ENST00000514133 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
SGCB-203ENST00000514133 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
SGCB-203ENST00000514133 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.58
SGCB-203ENST00000514133 DNAJC5BQ9UF47 199 aa11.36□□□□□ -0.59
SGCB-203ENST00000514133 KCNA4P22459 653 aa11.34□□□□□ -0.59
SGCB-203ENST00000514133 DCAF8L1A6NGE4 600 aa11.32□□□□□ -0.6
SGCB-203ENST00000514133 RNF39Q9H2S5 420 aa11.08□□□□□ -0.64
SGCB-203ENST00000514133 C1QBPQ07021 282 aaKnown RBP11.03□□□□□ -0.64
SGCB-203ENST00000514133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.03□□□□□ -0.64
SGCB-203ENST00000514133 CACNB1Q02641 598 aaPredicted RBP10.94□□□□□ -0.66
SGCB-203ENST00000514133 SLC4A1APQ9BWU0 796 aaKnown RBP10.83□□□□□ -0.68
SGCB-203ENST00000514133 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
SGCB-203ENST00000514133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.78□□□□□ -0.68
SGCB-203ENST00000514133 HNRNPUL2Q1KMD3 747 aaKnown RBP10.78□□□□□ -0.68
SGCB-203ENST00000514133 EHMT2Q96KQ7 1210 aa10.77□□□□□ -0.69
SGCB-203ENST00000514133 U3KPZ7 1027 aaPredicted RBP10.77□□□□□ -0.69
SGCB-203ENST00000514133 APLP2Q06481 763 aa10.76□□□□□ -0.69
SGCB-203ENST00000514133 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
SGCB-203ENST00000514133 MYCNP04198 464 aaPredicted RBP10.63□□□□□ -0.71
SGCB-203ENST00000514133 FOXD4L1Q9NU39 408 aa10.63□□□□□ -0.71
SGCB-203ENST00000514133 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
SGCB-203ENST00000514133 CAPN15O75808 1086 aa10.52□□□□□ -0.73
SGCB-203ENST00000514133 SPINK5Q9NQ38 1064 aaPredicted RBP10.47□□□□□ -0.73
SGCB-203ENST00000514133 DSG3P32926 999 aa10.43□□□□□ -0.74
SGCB-203ENST00000514133 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.74
SGCB-203ENST00000514133 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
SGCB-203ENST00000514133 ZBTB22O15209 634 aa10.37□□□□□ -0.75
SGCB-203ENST00000514133 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
SGCB-203ENST00000514133 ABCB7O75027 752 aa10.2□□□□□ -0.78
SGCB-203ENST00000514133 ZBTB12Q9Y330 459 aaPredicted RBP10.2□□□□□ -0.78
SGCB-203ENST00000514133 POLA2Q14181 598 aa10.19□□□□□ -0.78
SGCB-203ENST00000514133 ATF5Q9Y2D1 282 aaPredicted RBP10.16□□□□□ -0.78
SGCB-203ENST00000514133 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
SGCB-203ENST00000514133 FBLN2P98095 1184 aa9.98□□□□□ -0.81
SGCB-203ENST00000514133 AKT1S1Q96B36 256 aa9.87□□□□□ -0.83
SGCB-203ENST00000514133 SPDYE2BA6NHP3 402 aa9.84□□□□□ -0.83
SGCB-203ENST00000514133 SPDYE6P0CI01 402 aa9.84□□□□□ -0.83
SGCB-203ENST00000514133 SPDYE2Q495Y8 402 aa9.84□□□□□ -0.83
SGCB-203ENST00000514133 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
SGCB-203ENST00000514133 MKRN4PQ13434 485 aaPredicted RBP9.76□□□□□ -0.85
SGCB-203ENST00000514133 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
SGCB-203ENST00000514133 ZNF692Q9BU19 519 aaPredicted RBP9.68□□□□□ -0.86
SGCB-203ENST00000514133 SSUH2Q9Y2M2 353 aa9.68□□□□□ -0.86
SGCB-203ENST00000514133 CHRDL2Q6WN34 429 aa9.65□□□□□ -0.86
SGCB-203ENST00000514133 POTEHQ6S545 545 aa9.61□□□□□ -0.87
SGCB-203ENST00000514133 SPDYE1Q8NFV5 336 aaPredicted RBP9.6□□□□□ -0.87
SGCB-203ENST00000514133 PITPNM1O00562 1244 aa9.53□□□□□ -0.88
SGCB-203ENST00000514133 SPDYE4A6NLX3 237 aa9.51□□□□□ -0.89
SGCB-203ENST00000514133 PABPN1Q86U42 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
SGCB-203ENST00000514133 STAG3Q9UJ98 1225 aa9.48□□□□□ -0.89
SGCB-203ENST00000514133 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
SGCB-203ENST00000514133 FXR2P51116 673 aaKnown RBP eCLIP9.47□□□□□ -0.89
SGCB-203ENST00000514133 RTN4Q9NQC3 1192 aaKnown RBP9.47□□□□□ -0.89
SGCB-203ENST00000514133 AMER1Q5JTC6 1135 aaPredicted RBP9.45□□□□□ -0.9
SGCB-203ENST00000514133 PIP4P2Q8N4L2 257 aa9.43□□□□□ -0.9
SGCB-203ENST00000514133 CLEC11AQ9Y240 323 aa9.43□□□□□ -0.9
SGCB-203ENST00000514133 PRR29P0C7W0 189 aa9.4□□□□□ -0.9
SGCB-203ENST00000514133 PROM2Q8N271 834 aa9.37□□□□□ -0.91
SGCB-203ENST00000514133 FKBP8Q14318 412 aa9.33□□□□□ -0.92
SGCB-203ENST00000514133 PRKAR2AP13861 404 aaKnown RBP9.31□□□□□ -0.92
SGCB-203ENST00000514133 HAX1O00165 279 aa9.21□□□□□ -0.94
SGCB-203ENST00000514133 FARP1Q9Y4F1 1045 aaPredicted RBP9.18□□□□□ -0.94
SGCB-203ENST00000514133 PLEKHG5O94827 1062 aa9.17□□□□□ -0.94
SGCB-203ENST00000514133 CLCN6P51797 869 aa9.16□□□□□ -0.94
SGCB-203ENST00000514133 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
SGCB-203ENST00000514133 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
SGCB-203ENST00000514133 C19orf67A6NJJ6 358 aa9.15□□□□□ -0.94
SGCB-203ENST00000514133 NPM1P06748 294 aaKnown RBP eCLIP9.15□□□□□ -0.94
SGCB-203ENST00000514133 CHADLQ6NUI6 762 aa9.15□□□□□ -0.94
SGCB-203ENST00000514133 SP7Q8TDD2 431 aaPredicted RBP9.15□□□□□ -0.94
SGCB-203ENST00000514133 ZBTB47Q9UFB7 747 aaPredicted RBP9.1□□□□□ -0.95
SGCB-203ENST00000514133 PAK3O75914 559 aaPredicted RBP9.05□□□□□ -0.96
SGCB-203ENST00000514133 MIER1Q8N108 512 aa9.05□□□□□ -0.96
SGCB-203ENST00000514133 CD44P16070 742 aaKnown RBP9.04□□□□□ -0.96
SGCB-203ENST00000514133 MNX1P50219 401 aaPredicted RBP9.04□□□□□ -0.96
SGCB-203ENST00000514133 PLCD3Q8N3E9 789 aa9.01□□□□□ -0.97
SGCB-203ENST00000514133 EVX2Q03828 476 aa8.98□□□□□ -0.97
SGCB-203ENST00000514133 ZNF579Q8NAF0 562 aaKnown RBP8.97□□□□□ -0.97
SGCB-203ENST00000514133 ZRANB1Q9UGI0 708 aa8.94□□□□□ -0.98
SGCB-203ENST00000514133 GABBR2O75899 941 aa8.92□□□□□ -0.98
SGCB-203ENST00000514133 VASPP50552 380 aaPredicted RBP8.9□□□□□ -0.98
SGCB-203ENST00000514133 NUBP1P53384 320 aa8.83□□□□□ -1
SGCB-203ENST00000514133 FAM212AQ96EL1 285 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms