RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 CKS2P33552 79 aa6.93□□□□□ -1.3
USP16-206ENST00000485067 IFI27P40305 119 aaPredicted RBP6.93□□□□□ -1.3
USP16-206ENST00000485067 PSMB2P49721 201 aa6.93□□□□□ -1.3
USP16-206ENST00000485067 ERCC8Q13216 396 aa6.93□□□□□ -1.3
USP16-206ENST00000485067 CEMP1Q6PRD7 247 aaPredicted RBP6.93□□□□□ -1.3
USP16-206ENST00000485067 NBPF19A0A087WUL8 3843 aa6.92□□□□□ -1.3
USP16-206ENST00000485067 PRAC2D3DTV9 90 aa6.92□□□□□ -1.3
USP16-206ENST00000485067 NDUFA4O00483 81 aa6.92□□□□□ -1.3
USP16-206ENST00000485067 IGHG2P01859 326 aa6.92□□□□□ -1.3
USP16-206ENST00000485067 RPL18AQ02543 176 aaKnown RBP6.92□□□□□ -1.3
USP16-206ENST00000485067 ZNF575Q86XF7 245 aa6.92□□□□□ -1.3
USP16-206ENST00000485067 CYSTM1Q9H1C7 97 aa6.92□□□□□ -1.3
USP16-206ENST00000485067 LENEPQ9Y5L5 61 aa6.92□□□□□ -1.3
USP16-206ENST00000485067 FAM229AH3BQW9 127 aa6.92□□□□□ -1.3
USP16-206ENST00000485067 VCYO14598 125 aa6.92□□□□□ -1.3
USP16-206ENST00000485067 IGHV4-38-2P0DP08 117 aa6.92□□□□□ -1.3
USP16-206ENST00000485067 TMEM158Q8WZ71 300 aa6.92□□□□□ -1.3
USP16-206ENST00000485067 IGHV3-66A0A0C4DH42 116 aa6.91□□□□□ -1.3
USP16-206ENST00000485067 A6NDX4 124 aa6.91□□□□□ -1.3
USP16-206ENST00000485067 HBDP02042 147 aa6.91□□□□□ -1.3
USP16-206ENST00000485067 DSCR9P59020 149 aa6.91□□□□□ -1.3
USP16-206ENST00000485067 HERVK_113P61574 105 aa6.91□□□□□ -1.3
USP16-206ENST00000485067 LOC389332A0A1B0GUA5 103 aa6.9□□□□□ -1.3
USP16-206ENST00000485067 LINC01546A6NGU7 62 aa6.9□□□□□ -1.3
USP16-206ENST00000485067 MSMBP08118 114 aa6.9□□□□□ -1.3
USP16-206ENST00000485067 ZNF56Q15929 161 aa6.9□□□□□ -1.3
USP16-206ENST00000485067 MAPK1IP1LQ8NDC0 245 aa6.9□□□□□ -1.3
USP16-206ENST00000485067 COPS9Q8WXC6 57 aa6.9□□□□□ -1.3
USP16-206ENST00000485067 UPK3BQ9BT76 320 aa6.9□□□□□ -1.3
USP16-206ENST00000485067 TRBV7-6A0A0J9YX20 115 aa6.9□□□□□ -1.31
USP16-206ENST00000485067 LGALS9CQ6DKI2 356 aa6.9□□□□□ -1.31
USP16-206ENST00000485067 FP248Q71RG6 208 aaPredicted RBP6.9□□□□□ -1.31
USP16-206ENST00000485067 ZNF580Q9UK33 172 aa6.9□□□□□ -1.31
USP16-206ENST00000485067 IGHV3OR16-13A0A075B7E8 117 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 A0A096LNJ9 63 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 IGHV3-74A0A0B4J1X5 117 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 PLAC8L1A1L4L8 177 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 NPYP01303 97 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 CXCL5P42830 114 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 CACNG7P62955 275 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 BEAN1Q3B7T3 259 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 RNF185Q96GF1 192 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 TIMM8BQ9Y5J9 83 aaPredicted RBP6.89□□□□□ -1.31
USP16-206ENST00000485067 IGHV4-4A0A075B6R2 117 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 IGKV3D-20A0A0C4DH25 116 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 B4DSR2 109 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 SMKR1H3BMG3 65 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 H3BUX3 64 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 LGALS9O00182 355 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 LY6EQ16553 131 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 SPATA3Q8NHX4 192 aa6.89□□□□□ -1.31
USP16-206ENST00000485067 ZNF469Q96JG9 3925 aaPredicted RBP6.88□□□□□ -1.31
USP16-206ENST00000485067 IGHV3-49A0A0A0MS15 119 aa6.88□□□□□ -1.31
USP16-206ENST00000485067 C8orf87E5RJ46 101 aa6.88□□□□□ -1.31
USP16-206ENST00000485067 H3BVH4 76 aa6.88□□□□□ -1.31
USP16-206ENST00000485067 UBE2D3P61077 147 aa6.88□□□□□ -1.31
USP16-206ENST00000485067 UBE2D2P62837 147 aa6.88□□□□□ -1.31
USP16-206ENST00000485067 Q6ZS46 218 aa6.88□□□□□ -1.31
USP16-206ENST00000485067 LINC01600Q96MT4 127 aa6.88□□□□□ -1.31
USP16-206ENST00000485067 IGLV1-40P01703 118 aa6.88□□□□□ -1.31
USP16-206ENST00000485067 KRTAP10-9P60411 292 aa6.88□□□□□ -1.31
USP16-206ENST00000485067 SNRPD3P62318 126 aaKnown RBP6.88□□□□□ -1.31
USP16-206ENST00000485067 OR8A1Q8NGG7 326 aa6.88□□□□□ -1.31
USP16-206ENST00000485067 MSRB1Q9NZV6 116 aa6.88□□□□□ -1.31
USP16-206ENST00000485067 MXRA5Q9NR99 2828 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 NAV2Q8IVL1 2488 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 SLC25A16P16260 332 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 HIST1H4AP62805 103 aaKnown RBP6.87□□□□□ -1.31
USP16-206ENST00000485067 ORMDL2Q53FV1 153 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 IFI27L1Q96BM0 104 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 Q9H8V8 135 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 CHD6Q8TD26 2715 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 DOPEY2Q9Y3R5 2298 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 TLN2Q9Y4G6 2542 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 IGHV7-4-1A0A0J9YVY3 117 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 SOCS3O14543 225 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 SLC25A20O43772 301 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 FCER1GP30273 86 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 UNQ9165/PRO28630Q6UXU0 137 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 ZNF843Q8N446 348 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 SERP2Q8N6R1 65 aa6.87□□□□□ -1.31
USP16-206ENST00000485067 TENM4Q6N022 2769 aa6.86□□□□□ -1.31
USP16-206ENST00000485067 TRAV21A0A0B4J279 112 aa6.86□□□□□ -1.31
USP16-206ENST00000485067 HOXA3O43365 443 aaPredicted RBP6.86□□□□□ -1.31
USP16-206ENST00000485067 Q8N8P6 123 aa6.86□□□□□ -1.31
USP16-206ENST00000485067 TM2D3Q9BRN9 247 aa6.86□□□□□ -1.31
USP16-206ENST00000485067 TEX15Q9BXT5 2789 aa6.86□□□□□ -1.31
USP16-206ENST00000485067 TRBV12-3P01733 135 aa6.85□□□□□ -1.31
USP16-206ENST00000485067 MED14OSP0DP75 135 aa6.85□□□□□ -1.31
USP16-206ENST00000485067 GYPEP15421 78 aa6.85□□□□□ -1.31
USP16-206ENST00000485067 CFHR3Q02985 330 aa6.85□□□□□ -1.31
USP16-206ENST00000485067 SPANXN1Q5VSR9 72 aa6.85□□□□□ -1.31
USP16-206ENST00000485067 GPHB5Q86YW7 130 aa6.85□□□□□ -1.31
USP16-206ENST00000485067 BLCAPP62952 87 aa6.85□□□□□ -1.31
USP16-206ENST00000485067 TMEM170BQ5T4T1 132 aa6.85□□□□□ -1.31
USP16-206ENST00000485067 APCP25054 2843 aa6.85□□□□□ -1.31
USP16-206ENST00000485067 LOC107984156A0A0G2JMH3 177 aa6.84□□□□□ -1.31
USP16-206ENST00000485067 MRPS36P82909 103 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms