RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 USF3Q68DE3 2245 aa-0.66□□□□□ -2.51
PMS1-219ENST00000483293 NDUFB6O95139 128 aa-0.66□□□□□ -2.52
PMS1-219ENST00000483293 WFDC2Q14508 124 aa-0.66□□□□□ -2.52
PMS1-219ENST00000483293 COPZ2Q9P299 210 aa-0.66□□□□□ -2.52
PMS1-219ENST00000483293 CASKIN1Q8WXD9 1431 aa-0.66□□□□□ -2.52
PMS1-219ENST00000483293 PLXNB2O15031 1838 aa-0.66□□□□□ -2.52
PMS1-219ENST00000483293 CHD6Q8TD26 2715 aa-0.66□□□□□ -2.52
PMS1-219ENST00000483293 LRRC37A3O60309 1634 aa-0.67□□□□□ -2.52
PMS1-219ENST00000483293 PIN1P1O15428 100 aa-0.67□□□□□ -2.52
PMS1-219ENST00000483293 CEP152O94986 1710 aa-0.67□□□□□ -2.52
PMS1-219ENST00000483293 PRDM2Q13029 1718 aa-0.67□□□□□ -2.52
PMS1-219ENST00000483293 KRTAP20-2Q3LI61 65 aa-0.68□□□□□ -2.52
PMS1-219ENST00000483293 SCIMPQ6UWF3 145 aa-0.68□□□□□ -2.52
PMS1-219ENST00000483293 KCNRGQ8N5I3 272 aa-0.68□□□□□ -2.52
PMS1-219ENST00000483293 HERC1Q15751 4861 aa-0.69□□□□□ -2.52
PMS1-219ENST00000483293 ZNF609O15014 1411 aa-0.69□□□□□ -2.52
PMS1-219ENST00000483293 PI4KAP42356 2102 aa-0.69□□□□□ -2.52
PMS1-219ENST00000483293 Q5VV11 94 aa-0.69□□□□□ -2.52
PMS1-219ENST00000483293 LPAP08519 4548 aa-0.69□□□□□ -2.52
PMS1-219ENST00000483293 FLNAP21333 2647 aaKnown RBP-0.69□□□□□ -2.52
PMS1-219ENST00000483293 PCLOQ9Y6V0 5065 aa-0.7□□□□□ -2.52
PMS1-219ENST00000483293 COPZ1P61923 177 aa-0.7□□□□□ -2.52
PMS1-219ENST00000483293 PPRC1Q5VV67 1664 aaKnown RBP-0.7□□□□□ -2.52
PMS1-219ENST00000483293 MAP1BP46821 2468 aaKnown RBP-0.7□□□□□ -2.52
PMS1-219ENST00000483293 RPS25P62851 125 aaKnown RBP-0.71□□□□□ -2.52
PMS1-219ENST00000483293 SMIM21Q3B7S5 101 aa-0.71□□□□□ -2.52
PMS1-219ENST00000483293 ANP32BQ92688 251 aaKnown RBP-0.71□□□□□ -2.52
PMS1-219ENST00000483293 PKD1L1Q8TDX9 2849 aa-0.71□□□□□ -2.52
PMS1-219ENST00000483293 LAMA5O15230 3695 aa-0.71□□□□□ -2.52
PMS1-219ENST00000483293 KDM3BQ7LBC6 1761 aa-0.72□□□□□ -2.52
PMS1-219ENST00000483293 PPP1R17O96001 155 aa-0.72□□□□□ -2.52
PMS1-219ENST00000483293 GUCA1AP43080 201 aaPredicted RBP-0.72□□□□□ -2.52
PMS1-219ENST00000483293 CCL18P55774 89 aa-0.72□□□□□ -2.52
PMS1-219ENST00000483293 CCL8P80075 99 aa-0.72□□□□□ -2.52
PMS1-219ENST00000483293 MAFIPQ8WZ33 124 aa-0.72□□□□□ -2.52
PMS1-219ENST00000483293 NF1P21359 2839 aa-0.73□□□□□ -2.53
PMS1-219ENST00000483293 DCHS2Q6V1P9 2916 aa-0.73□□□□□ -2.53
PMS1-219ENST00000483293 CSPG4Q6UVK1 2322 aa-0.73□□□□□ -2.53
PMS1-219ENST00000483293 HAMPP81172 84 aa-0.74□□□□□ -2.53
PMS1-219ENST00000483293 SPAG11BQ08648 103 aa-0.74□□□□□ -2.53
PMS1-219ENST00000483293 KRTAP19-8Q3LI54 63 aa-0.74□□□□□ -2.53
PMS1-219ENST00000483293 HERC2O95714 4834 aa-0.74□□□□□ -2.53
PMS1-219ENST00000483293 COL6A3P12111 3177 aa-0.74□□□□□ -2.53
PMS1-219ENST00000483293 ZNF236Q9UL36 1845 aa-0.75□□□□□ -2.53
PMS1-219ENST00000483293 DOCK1Q14185 1865 aa-0.75□□□□□ -2.53
PMS1-219ENST00000483293 Q8IZM0 81 aa-0.75□□□□□ -2.53
PMS1-219ENST00000483293 SPCS1Q9Y6A9 102 aa-0.75□□□□□ -2.53
PMS1-219ENST00000483293 GVINP1Q7Z2Y8 2422 aa-0.75□□□□□ -2.53
PMS1-219ENST00000483293 VWFP04275 2813 aa-0.75□□□□□ -2.53
PMS1-219ENST00000483293 BCE1O60756 84 aa-0.76□□□□□ -2.53
PMS1-219ENST00000483293 ZNF518AQ6AHZ1 1483 aa-0.76□□□□□ -2.53
PMS1-219ENST00000483293 LRP1BQ9NZR2 4599 aa-0.76□□□□□ -2.53
PMS1-219ENST00000483293 UNC13AQ9UPW8 1703 aa-0.77□□□□□ -2.53
PMS1-219ENST00000483293 RBM3P98179 157 aaKnown RBP-0.77□□□□□ -2.53
PMS1-219ENST00000483293 SDF2Q99470 211 aa-0.77□□□□□ -2.53
PMS1-219ENST00000483293 FAT1Q14517 4588 aa-0.77□□□□□ -2.53
PMS1-219ENST00000483293 SETXQ7Z333 2677 aaKnown RBP-0.77□□□□□ -2.53
PMS1-219ENST00000483293 CTXND1A0A1B0GTU2 59 aa-0.78□□□□□ -2.53
PMS1-219ENST00000483293 HCG22E2RYF7 251 aa-0.78□□□□□ -2.53
PMS1-219ENST00000483293 MT4P47944 62 aa-0.78□□□□□ -2.53
PMS1-219ENST00000483293 SMCO1Q147U7 214 aa-0.78□□□□□ -2.53
PMS1-219ENST00000483293 Q5VSD8 79 aa-0.78□□□□□ -2.53
PMS1-219ENST00000483293 MYO7BQ6PIF6 2116 aa-0.78□□□□□ -2.53
PMS1-219ENST00000483293 TCEAL4Q96EI5 215 aa-0.78□□□□□ -2.53
PMS1-219ENST00000483293 R4GMQ9 66 aa-0.78□□□□□ -2.53
PMS1-219ENST00000483293 DOCK2Q92608 1830 aa-0.78□□□□□ -2.53
PMS1-219ENST00000483293 LRP6O75581 1613 aa-0.78□□□□□ -2.54
PMS1-219ENST00000483293 USH2AO75445 5202 aa-0.79□□□□□ -2.54
PMS1-219ENST00000483293 MRC1P22897 1456 aa-0.79□□□□□ -2.54
PMS1-219ENST00000483293 IFT140Q96RY7 1462 aa-0.79□□□□□ -2.54
PMS1-219ENST00000483293 HECTD4Q9Y4D8 3996 aa-0.79□□□□□ -2.54
PMS1-219ENST00000483293 PATJQ8NI35 1801 aa-0.79□□□□□ -2.54
PMS1-219ENST00000483293 FXYD6-FXYD2A0A087WZ82 144 aa-0.79□□□□□ -2.54
PMS1-219ENST00000483293 M0R135 149 aa-0.79□□□□□ -2.54
PMS1-219ENST00000483293 HIST1H1DP16402 221 aaKnown RBP-0.79□□□□□ -2.54
PMS1-219ENST00000483293 AGPAT4-IT1Q9H0P7 198 aa-0.79□□□□□ -2.54
PMS1-219ENST00000483293 ARAP2Q8WZ64 1704 aa-0.79□□□□□ -2.54
PMS1-219ENST00000483293 ERCC6L2Q5T890 1561 aa-0.79□□□□□ -2.54
PMS1-219ENST00000483293 NBEAL1Q6ZS30 2694 aa-0.8□□□□□ -2.54
PMS1-219ENST00000483293 MYOM3Q5VTT5 1437 aa-0.8□□□□□ -2.54
PMS1-219ENST00000483293 TRAV13-2A0A0B4J235 113 aa-0.8□□□□□ -2.54
PMS1-219ENST00000483293 SIX6O95475 246 aa-0.8□□□□□ -2.54
PMS1-219ENST00000483293 C10orf128Q5T292 105 aa-0.8□□□□□ -2.54
PMS1-219ENST00000483293 PDCD10Q9BUL8 212 aa-0.8□□□□□ -2.54
PMS1-219ENST00000483293 TMEM191AQ9H0A3 160 aa-0.8□□□□□ -2.54
PMS1-219ENST00000483293 FAT2Q9NYQ8 4349 aa-0.8□□□□□ -2.54
PMS1-219ENST00000483293 ALMS1Q8TCU4 4167 aa-0.8□□□□□ -2.54
PMS1-219ENST00000483293 HIVEP1P15822 2718 aa-0.8□□□□□ -2.54
PMS1-219ENST00000483293 SPRR1AP35321 89 aa-0.81□□□□□ -2.54
PMS1-219ENST00000483293 ALX1Q15699 326 aa-0.81□□□□□ -2.54
PMS1-219ENST00000483293 AQP10Q96PS8 301 aa-0.81□□□□□ -2.54
PMS1-219ENST00000483293 APC2O95996 2303 aa-0.81□□□□□ -2.54
PMS1-219ENST00000483293 TGP01266 2768 aa-0.81□□□□□ -2.54
PMS1-219ENST00000483293 LAMC1P11047 1609 aa-0.82□□□□□ -2.54
PMS1-219ENST00000483293 WNK1Q9H4A3 2382 aa-0.82□□□□□ -2.54
PMS1-219ENST00000483293 PRM1P04553 51 aa-0.82□□□□□ -2.54
PMS1-219ENST00000483293 DPH3Q96FX2 82 aa-0.82□□□□□ -2.54
PMS1-219ENST00000483293 LOC105371267A0A1B0GV96 52 aa-0.83□□□□□ -2.54
PMS1-219ENST00000483293 SPRR2DP22532 72 aa-0.83□□□□□ -2.54
PMS1-219ENST00000483293 PXDNQ92626 1479 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms