RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 AEBP2Q6ZN18 517 aaPredicted RBP31.51■■■□□ 2.63
PMS1-219ENST00000483293 CHIC1Q5VXU3 224 aa29.29■■■□□ 2.28
PMS1-219ENST00000483293 SENP3Q9H4L4 574 aaPredicted RBP26.9■■□□□ 1.9
PMS1-219ENST00000483293 PHF23Q9BUL5 403 aaPredicted RBP26.47■■□□□ 1.83
PMS1-219ENST00000483293 FOXD1Q16676 465 aa25.26■■□□□ 1.63
PMS1-219ENST00000483293 POTEDQ86YR6 584 aa24.96■■□□□ 1.59
PMS1-219ENST00000483293 MSH5O43196 834 aa23.9■■□□□ 1.42
PMS1-219ENST00000483293 PIAS4Q8N2W9 510 aaPredicted RBP23.32■■□□□ 1.32
PMS1-219ENST00000483293 PPP6R1Q9UPN7 881 aa22.96■■□□□ 1.27
PMS1-219ENST00000483293 ADRA2BP18089 450 aa22.8■■□□□ 1.24
PMS1-219ENST00000483293 PLPPR3Q6T4P5 718 aa22.68■■□□□ 1.22
PMS1-219ENST00000483293 MAPK8IP2Q13387 824 aaPredicted RBP21.24■□□□□ 0.99
PMS1-219ENST00000483293 DMRT2Q9Y5R5 561 aa21.23■□□□□ 0.99
PMS1-219ENST00000483293 CACNB1Q02641 598 aaPredicted RBP21.08■□□□□ 0.97
PMS1-219ENST00000483293 SCAF1Q9H7N4 1312 aaKnown RBP20.73■□□□□ 0.91
PMS1-219ENST00000483293 RNF39Q9H2S5 420 aa20.37■□□□□ 0.85
PMS1-219ENST00000483293 DCAF8L1A6NGE4 600 aa20.34■□□□□ 0.85
PMS1-219ENST00000483293 HOXD11P31277 338 aaPredicted RBP20.09■□□□□ 0.81
PMS1-219ENST00000483293 C1QBPQ07021 282 aaKnown RBP19.97■□□□□ 0.79
PMS1-219ENST00000483293 PPP4R3CPQ6ZMV5 832 aa19.95■□□□□ 0.78
PMS1-219ENST00000483293 KCNA4P22459 653 aa19.83■□□□□ 0.77
PMS1-219ENST00000483293 RNF216Q9NWF9 866 aaPredicted RBP19.67■□□□□ 0.74
PMS1-219ENST00000483293 CNKSR2Q8WXI2 1034 aa19.61■□□□□ 0.73
PMS1-219ENST00000483293 DNAJC5BQ9UF47 199 aa19.55■□□□□ 0.72
PMS1-219ENST00000483293 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
PMS1-219ENST00000483293 POTEHQ6S545 545 aa19.35■□□□□ 0.69
PMS1-219ENST00000483293 NPM3O75607 178 aaKnown RBP19.2■□□□□ 0.66
PMS1-219ENST00000483293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.653e-10■■□□□ 12.8
PMS1-219ENST00000483293 SLC4A1APQ9BWU0 796 aaKnown RBP18.92■□□□□ 0.62
PMS1-219ENST00000483293 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
PMS1-219ENST00000483293 DSG3P32926 999 aa18.78■□□□□ 0.6
PMS1-219ENST00000483293 SPINK5Q9NQ38 1064 aaPredicted RBP18.67■□□□□ 0.58
PMS1-219ENST00000483293 U3KPZ7 1027 aaPredicted RBP18.65■□□□□ 0.58
PMS1-219ENST00000483293 CAPN15O75808 1086 aa18.61■□□□□ 0.57
PMS1-219ENST00000483293 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
PMS1-219ENST00000483293 ZBTB22O15209 634 aa18.24■□□□□ 0.51
PMS1-219ENST00000483293 ABCB7O75027 752 aa18.14■□□□□ 0.49
PMS1-219ENST00000483293 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
PMS1-219ENST00000483293 FOXD4L1Q9NU39 408 aa18.09■□□□□ 0.49
PMS1-219ENST00000483293 SLC4A2P04920 1241 aa18.07■□□□□ 0.48
PMS1-219ENST00000483293 ZNF219Q9P2Y4 722 aaPredicted RBP18■□□□□ 0.47
PMS1-219ENST00000483293 APLP2Q06481 763 aa17.88■□□□□ 0.45
PMS1-219ENST00000483293 CHRDL2Q6WN34 429 aa17.87■□□□□ 0.45
PMS1-219ENST00000483293 RBM42Q9BTD8 480 aaKnown RBP17.84■□□□□ 0.45
PMS1-219ENST00000483293 SP7Q8TDD2 431 aaPredicted RBP17.7■□□□□ 0.42
PMS1-219ENST00000483293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
PMS1-219ENST00000483293 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
PMS1-219ENST00000483293 HNRNPUL2Q1KMD3 747 aaKnown RBP17.68■□□□□ 0.42
PMS1-219ENST00000483293 SAMD1Q6SPF0 538 aaPredicted RBP17.58■□□□□ 0.4
PMS1-219ENST00000483293 POLA2Q14181 598 aa17.41■□□□□ 0.38
PMS1-219ENST00000483293 ATXN8OSP0DMR3 200 aa17.33■□□□□ 0.36
PMS1-219ENST00000483293 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
PMS1-219ENST00000483293 PIP4P2Q8N4L2 257 aa17.28■□□□□ 0.36
PMS1-219ENST00000483293 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
PMS1-219ENST00000483293 HAX1O00165 279 aa17.16■□□□□ 0.34
PMS1-219ENST00000483293 REM2Q8IYK8 340 aaPredicted RBP17.15■□□□□ 0.34
PMS1-219ENST00000483293 FXR2P51116 673 aaKnown RBP eCLIP17.03■□□□□ 0.32
PMS1-219ENST00000483293 PITPNM1O00562 1244 aa16.99■□□□□ 0.31
PMS1-219ENST00000483293 EVX2Q03828 476 aa16.99■□□□□ 0.31
PMS1-219ENST00000483293 OSCARQ8IYS5 282 aa16.93■□□□□ 0.3
PMS1-219ENST00000483293 ZBTB12Q9Y330 459 aaPredicted RBP16.92■□□□□ 0.3
PMS1-219ENST00000483293 FKBP8Q14318 412 aa16.62■□□□□ 0.25
PMS1-219ENST00000483293 LHX8Q68G74 356 aa16.59■□□□□ 0.25
PMS1-219ENST00000483293 MKRN4PQ13434 485 aaPredicted RBP16.53■□□□□ 0.24
PMS1-219ENST00000483293 C19orf67A6NJJ6 358 aa16.52■□□□□ 0.24
PMS1-219ENST00000483293 PRKAR2AP13861 404 aaKnown RBP16.51■□□□□ 0.23
PMS1-219ENST00000483293 GABBR2O75899 941 aa16.5■□□□□ 0.23
PMS1-219ENST00000483293 FBLN2P98095 1184 aa16.49■□□□□ 0.23
PMS1-219ENST00000483293 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
PMS1-219ENST00000483293 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
PMS1-219ENST00000483293 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
PMS1-219ENST00000483293 CLEC11AQ9Y240 323 aa16.32■□□□□ 0.2
PMS1-219ENST00000483293 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
PMS1-219ENST00000483293 SPDYE1Q8NFV5 336 aaPredicted RBP16.29■□□□□ 0.2
PMS1-219ENST00000483293 PLSCR2Q9NRY7 297 aa16.26■□□□□ 0.19
PMS1-219ENST00000483293 POTEIP0CG38 1075 aa16.2■□□□□ 0.18
PMS1-219ENST00000483293 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
PMS1-219ENST00000483293 SSUH2Q9Y2M2 353 aa16.1■□□□□ 0.17
PMS1-219ENST00000483293 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
PMS1-219ENST00000483293 CD44P16070 742 aaKnown RBP15.93■□□□□ 0.14
PMS1-219ENST00000483293 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
PMS1-219ENST00000483293 PROM2Q8N271 834 aa15.91■□□□□ 0.14
PMS1-219ENST00000483293 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
PMS1-219ENST00000483293 CLCN6P51797 869 aa15.82■□□□□ 0.12
PMS1-219ENST00000483293 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
PMS1-219ENST00000483293 FARP1Q9Y4F1 1045 aaPredicted RBP15.81■□□□□ 0.12
PMS1-219ENST00000483293 DCBLD2Q96PD2 775 aa15.79■□□□□ 0.12
PMS1-219ENST00000483293 OTUD5Q96G74 571 aa15.75■□□□□ 0.11
PMS1-219ENST00000483293 POTEMA6NI47 508 aa15.67■□□□□ 0.1
PMS1-219ENST00000483293 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
PMS1-219ENST00000483293 VASPP50552 380 aaPredicted RBP15.66■□□□□ 0.1
PMS1-219ENST00000483293 POTEB2H3BUK9 544 aa15.65■□□□□ 0.1
PMS1-219ENST00000483293 POTEGQ6S5H5 508 aa15.6■□□□□ 0.09
PMS1-219ENST00000483293 RTN4Q9NQC3 1192 aaKnown RBP15.6■□□□□ 0.09
PMS1-219ENST00000483293 GALR2O43603 387 aaPredicted RBP15.56■□□□□ 0.08
PMS1-219ENST00000483293 ZRANB1Q9UGI0 708 aa15.56■□□□□ 0.08
PMS1-219ENST00000483293 STAG3Q9UJ98 1225 aa15.53■□□□□ 0.08
PMS1-219ENST00000483293 AMER1Q5JTC6 1135 aaPredicted RBP15.52■□□□□ 0.08
PMS1-219ENST00000483293 IFNLR1Q8IU57 520 aaPredicted RBP15.5■□□□□ 0.07
PMS1-219ENST00000483293 MIER1Q8N108 512 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms