RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 KIF21AQ7Z4S6 1674 aa3.26□□□□□ -1.89
RC3H1-204ENST00000479099 DIP2CQ9Y2E4 1556 aa3.25□□□□□ -1.89
RC3H1-204ENST00000479099 TRBV6-8A0A0A6YYG3 113 aa3.25□□□□□ -1.89
RC3H1-204ENST00000479099 CHKB-CPT1BH3BT56 60 aa3.25□□□□□ -1.89
RC3H1-204ENST00000479099 IGHV3-30P01768 117 aa3.25□□□□□ -1.89
RC3H1-204ENST00000479099 IGHV3-30-5P0DP03 117 aa3.25□□□□□ -1.89
RC3H1-204ENST00000479099 EDDM3BP56851 147 aa3.25□□□□□ -1.89
RC3H1-204ENST00000479099 CDC42SE2Q9NRR3 84 aa3.25□□□□□ -1.89
RC3H1-204ENST00000479099 KIAA0100Q14667 2235 aaKnown RBP3.25□□□□□ -1.89
RC3H1-204ENST00000479099 SEC16AO15027 2179 aa3.25□□□□□ -1.89
RC3H1-204ENST00000479099 EFCAB5A4FU69 1503 aa3.24□□□□□ -1.89
RC3H1-204ENST00000479099 MED13Q9UHV7 2174 aa3.24□□□□□ -1.89
RC3H1-204ENST00000479099 BTAF1O14981 1849 aa3.24□□□□□ -1.89
RC3H1-204ENST00000479099 TRBV25-1A0A075B6N4 114 aa3.24□□□□□ -1.89
RC3H1-204ENST00000479099 A0A1B0GVY2 172 aa3.24□□□□□ -1.89
RC3H1-204ENST00000479099 A8MU10 97 aa3.24□□□□□ -1.89
RC3H1-204ENST00000479099 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
RC3H1-204ENST00000479099 SPACA4Q8TDM5 124 aa3.24□□□□□ -1.89
RC3H1-204ENST00000479099 ANAPC11Q9NYG5 84 aa3.24□□□□□ -1.89
RC3H1-204ENST00000479099 DLG5Q8TDM6 1919 aa3.24□□□□□ -1.89
RC3H1-204ENST00000479099 TARBP1Q13395 1621 aaKnown RBP3.23□□□□□ -1.89
RC3H1-204ENST00000479099 CEP192Q8TEP8 1941 aa3.23□□□□□ -1.89
RC3H1-204ENST00000479099 CLPSL1A2RUU4 121 aa3.23□□□□□ -1.89
RC3H1-204ENST00000479099 TMEM14DPA8MWL7 114 aa3.23□□□□□ -1.89
RC3H1-204ENST00000479099 ZNF56Q15929 161 aa3.23□□□□□ -1.89
RC3H1-204ENST00000479099 TMEM170BQ5T4T1 132 aa3.23□□□□□ -1.89
RC3H1-204ENST00000479099 TP53TG3Q9ULZ0 132 aa3.23□□□□□ -1.89
RC3H1-204ENST00000479099 PREX2Q70Z35 1606 aa3.22□□□□□ -1.89
RC3H1-204ENST00000479099 SIP14410 1827 aa3.22□□□□□ -1.89
RC3H1-204ENST00000479099 KRTAP1-4P0C5Y4 121 aa3.22□□□□□ -1.89
RC3H1-204ENST00000479099 ELOF1P60002 83 aaKnown RBP3.22□□□□□ -1.89
RC3H1-204ENST00000479099 ARFGEF2Q9Y6D5 1785 aa3.22□□□□□ -1.89
RC3H1-204ENST00000479099 CR1P17927 2039 aa3.22□□□□□ -1.89
RC3H1-204ENST00000479099 NRXN2Q9P2S2 1712 aa3.22□□□□□ -1.89
RC3H1-204ENST00000479099 HMGXB3Q12766 1538 aa3.21□□□□□ -1.9
RC3H1-204ENST00000479099 A0A087WWC5 75 aa3.21□□□□□ -1.9
RC3H1-204ENST00000479099 TRBV6-4A0A1B0GX49 114 aa3.21□□□□□ -1.9
RC3H1-204ENST00000479099 KRTAP10-3P60369 221 aa3.21□□□□□ -1.9
RC3H1-204ENST00000479099 DYNLRB1Q9NP97 96 aa3.21□□□□□ -1.9
RC3H1-204ENST00000479099 NDUFA4L2Q9NRX3 87 aa3.21□□□□□ -1.9
RC3H1-204ENST00000479099 ZFHX2Q9C0A1 2572 aaPredicted RBP3.21□□□□□ -1.9
RC3H1-204ENST00000479099 RGPD1P0DJD0 1748 aa3.21□□□□□ -1.9
RC3H1-204ENST00000479099 MYOM1P52179 1685 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 CTTNBP2Q8WZ74 1663 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 TRBV6-7A0A0A0MS04 114 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 LOC101927531A0A1B0GV80 90 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 C7orf77A4D0Y5 90 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 LRCOL1A6NCL2 159 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 HIGD1CA8MV81 97 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 SMIM13P0DJ93 91 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 PDE6GP18545 87 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 XAF1Q6GPH4 301 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 SFTA2Q6UW10 78 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 LENEPQ9Y5L5 61 aa3.2□□□□□ -1.9
RC3H1-204ENST00000479099 AFDNP55196 1824 aaKnown RBP3.2□□□□□ -1.9
RC3H1-204ENST00000479099 PDCD11Q14690 1871 aaKnown RBP3.2□□□□□ -1.9
RC3H1-204ENST00000479099 NEXMIFQ5QGS0 1516 aa3.19□□□□□ -1.9
RC3H1-204ENST00000479099 LMTK2Q8IWU2 1503 aa3.19□□□□□ -1.9
RC3H1-204ENST00000479099 LRRC37A3O60309 1634 aa3.19□□□□□ -1.9
RC3H1-204ENST00000479099 HMGN4O00479 90 aa3.18□□□□□ -1.9
RC3H1-204ENST00000479099 IGLV3-1P01715 115 aa3.18□□□□□ -1.9
RC3H1-204ENST00000479099 HMGN2P05204 90 aaKnown RBP3.18□□□□□ -1.9
RC3H1-204ENST00000479099 GNGT1P63211 74 aa3.18□□□□□ -1.9
RC3H1-204ENST00000479099 TMEM14BQ9NUH8 114 aa3.18□□□□□ -1.9
RC3H1-204ENST00000479099 COL4A2P08572 1712 aa3.18□□□□□ -1.9
RC3H1-204ENST00000479099 MED12Q93074 2177 aa3.18□□□□□ -1.9
RC3H1-204ENST00000479099 EHBP1L1Q8N3D4 1523 aa3.18□□□□□ -1.9
RC3H1-204ENST00000479099 DLEC1Q9Y238 1755 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 ESPL1Q14674 2120 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 ARHGEF5Q12774 1597 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 LAMA4Q16363 1823 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 ITSN1Q15811 1721 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 LOC285095A0A1B0GVY8 99 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 JMJD7-PLA2G4BH0Y9G9 81 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 PPYP01298 95 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 IGLV6-57P01721 117 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 SSBP1Q04837 148 aaKnown RBP3.17□□□□□ -1.9
RC3H1-204ENST00000479099 KRTAP13-2Q52LG2 175 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 DEFB121Q5J5C9 76 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 Q86TA4 180 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 C20orf197Q8N268 126 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 TVP23CQ96ET8 276 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 V9GYH0 126 aa3.17□□□□□ -1.9
RC3H1-204ENST00000479099 ABCA9Q8IUA7 1624 aa3.16□□□□□ -1.9
RC3H1-204ENST00000479099 IGKV2-28A0A075B6P5 120 aa3.16□□□□□ -1.9
RC3H1-204ENST00000479099 C10orf142B7Z368 130 aa3.16□□□□□ -1.9
RC3H1-204ENST00000479099 UMAD1C9J7I0 102 aa3.16□□□□□ -1.9
RC3H1-204ENST00000479099 IGKV2D-28P01615 120 aa3.16□□□□□ -1.9
RC3H1-204ENST00000479099 RNASE3P12724 160 aaKnown RBP3.16□□□□□ -1.9
RC3H1-204ENST00000479099 C10orf55Q5SWW7 151 aa3.16□□□□□ -1.9
RC3H1-204ENST00000479099 DOCK11Q5JSL3 2073 aa3.16□□□□□ -1.9
RC3H1-204ENST00000479099 TIAM1Q13009 1591 aa3.16□□□□□ -1.9
RC3H1-204ENST00000479099 COL5A3P25940 1745 aaPredicted RBP3.16□□□□□ -1.9
RC3H1-204ENST00000479099 ADAMTS9Q9P2N4 1935 aa3.15□□□□□ -1.9
RC3H1-204ENST00000479099 UNC13CQ8NB66 2214 aa3.15□□□□□ -1.9
RC3H1-204ENST00000479099 ZNF815PA8K554 130 aa3.15□□□□□ -1.91
RC3H1-204ENST00000479099 F8WEM9 126 aa3.15□□□□□ -1.91
RC3H1-204ENST00000479099 CCL3L1P16619 93 aa3.15□□□□□ -1.91
RC3H1-204ENST00000479099 DEFB132Q7Z7B7 95 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms