RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 OPRPNQ99935 248 aaPredicted RBP5.47□□□□□ -1.53
SYNE1-213ENST00000448038 DEFB131BA0A096LNP1 70 aa5.47□□□□□ -1.53
SYNE1-213ENST00000448038 IGLV1-51P01701 117 aa5.47□□□□□ -1.53
SYNE1-213ENST00000448038 PRM2P04554 102 aa5.47□□□□□ -1.53
SYNE1-213ENST00000448038 CEMP1Q6PRD7 247 aaPredicted RBP5.47□□□□□ -1.53
SYNE1-213ENST00000448038 EDA2RQ9HAV5 297 aa5.47□□□□□ -1.53
SYNE1-213ENST00000448038 CDPF1Q6NVV7 123 aa5.47□□□□□ -1.53
SYNE1-213ENST00000448038 LURAP1LQ8IV03 231 aa5.47□□□□□ -1.53
SYNE1-213ENST00000448038 KIR2DL5BA0A0G2JN68 375 aa5.46□□□□□ -1.53
SYNE1-213ENST00000448038 KIR2DL5BA0A0G2JPC4 375 aa5.46□□□□□ -1.53
SYNE1-213ENST00000448038 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.53
SYNE1-213ENST00000448038 KIR2DL5AQ8N109 375 aa5.46□□□□□ -1.53
SYNE1-213ENST00000448038 KIR2DL5BQ8NHK3 375 aa5.46□□□□□ -1.53
SYNE1-213ENST00000448038 CAMK2N2Q96S95 79 aa5.46□□□□□ -1.53
SYNE1-213ENST00000448038 UNC80Q8N2C7 3258 aa5.46□□□□□ -1.53
SYNE1-213ENST00000448038 TRAV8-3A0A0A6YYJ7 113 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 IGHV4-28A0A0C4DH34 117 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 HERV-K104P63124 156 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 CEND1Q8N111 149 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 IL17DQ8TAD2 202 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 DSCAML1Q8TD84 2053 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 A0A1B0GV72 72 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 SIVA1O15304 175 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 TAL2Q16559 108 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 NEXN-AS1Q8NBZ9 246 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 OVOL2Q9BRP0 275 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 LAMTOR3Q9UHA4 124 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 TET2Q6N021 2002 aaPredicted RBP5.46□□□□□ -1.54
SYNE1-213ENST00000448038 PROK1P58294 105 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 M0QY20 66 aa5.46□□□□□ -1.54
SYNE1-213ENST00000448038 PRB2P02812 416 aaPredicted RBP5.46□□□□□ -1.54
SYNE1-213ENST00000448038 RS1O15537 224 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 Q6ZUT4 128 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 SNHG12Q9BXW3 62 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 FLNBO75369 2602 aaKnown RBP5.45□□□□□ -1.54
SYNE1-213ENST00000448038 C11orf86A6NJI1 115 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 IGHV4-30-4P0DP06 118 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 TDRG1Q3Y452 100 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 BVES-AS1Q5T3Y7 98 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 C2orf82Q6UX34 121 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 TSPAN13O95857 204 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 ODF1Q14990 250 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 COX7B2Q8TF08 81 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 RNF185Q96GF1 192 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 CCL25O15444 150 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 BOD1L2Q8IYS8 172 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 GTSF1LQ9H1H1 148 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 PRO1854Q9UHT4 67 aa5.45□□□□□ -1.54
SYNE1-213ENST00000448038 PRSS47A8MTI9 375 aa5.44□□□□□ -1.54
SYNE1-213ENST00000448038 TRBV6-4A0A1B0GX49 114 aa5.44□□□□□ -1.54
SYNE1-213ENST00000448038 TRAV13-2A0A0B4J235 113 aa5.44□□□□□ -1.54
SYNE1-213ENST00000448038 Q8N2B8 174 aa5.44□□□□□ -1.54
SYNE1-213ENST00000448038 CDH23Q9H251 3354 aa5.44□□□□□ -1.54
SYNE1-213ENST00000448038 BPTFQ12830 3046 aa5.44□□□□□ -1.54
SYNE1-213ENST00000448038 COL27A1Q8IZC6 1860 aaPredicted RBP5.44□□□□□ -1.54
SYNE1-213ENST00000448038 C9orf85Q96MD7 179 aa5.44□□□□□ -1.54
SYNE1-213ENST00000448038 LINC00467Q9BRT7 94 aa5.44□□□□□ -1.54
SYNE1-213ENST00000448038 COX11Q9Y6N1 276 aa5.44□□□□□ -1.54
SYNE1-213ENST00000448038 C9JAW5 83 aa5.44□□□□□ -1.54
SYNE1-213ENST00000448038 TM2D2Q9BX73 214 aa5.44□□□□□ -1.54
SYNE1-213ENST00000448038 RPL18AQ02543 176 aaKnown RBP5.43□□□□□ -1.54
SYNE1-213ENST00000448038 SCRT2Q9NQ03 307 aa5.43□□□□□ -1.54
SYNE1-213ENST00000448038 F8WEM9 126 aa5.43□□□□□ -1.54
SYNE1-213ENST00000448038 TTTY13Q9BZ97 58 aa5.43□□□□□ -1.54
SYNE1-213ENST00000448038 YPEL4Q96NS1 127 aa5.43□□□□□ -1.54
SYNE1-213ENST00000448038 E9PLD3 99 aa5.43□□□□□ -1.54
SYNE1-213ENST00000448038 K7ERJ3 54 aa5.43□□□□□ -1.54
SYNE1-213ENST00000448038 GAGE2EQ4V326 116 aa5.43□□□□□ -1.54
SYNE1-213ENST00000448038 LINC00269Q8N2A0 174 aa5.43□□□□□ -1.54
SYNE1-213ENST00000448038 GAGE2DQ9UEU5 116 aa5.43□□□□□ -1.54
SYNE1-213ENST00000448038 ZNF292O60281 2723 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 SOCS3O14543 225 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 SPAG11BQ08648 103 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 TTC32Q5I0X7 151 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 U3KQK5 164 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 HECTD1Q9ULT8 2610 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 NDUFA1O15239 70 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 DLEU1O43261 78 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 CRYGDP07320 174 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 F8P00451 2351 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 TRBV6-8A0A0A6YYG3 113 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 TRAV8-4A0A0B4J246 113 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 REG3AQ06141 175 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 UBE2V1Q13404 147 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 C12orf74Q32Q52 190 aa5.42□□□□□ -1.54
SYNE1-213ENST00000448038 TRBV20-1A0A075B6N2 111 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 IGHV4-4A0A075B6R2 117 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 GAGE12HA6NDE8 117 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 UBE2BP63146 152 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 TRAV10A0A0B4J240 114 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 IGHV1-58A0A0C4DH39 117 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 TRBV6-5A0A0K0K1A5 114 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 IFITM1P13164 125 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 TRBV27A0A0K0K1C4 114 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 SPATA12Q7Z6I5 190 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 NRACQ8N912 160 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 TRIOO75962 3097 aa5.41□□□□□ -1.54
SYNE1-213ENST00000448038 H7C423 109 aa5.4□□□□□ -1.54
SYNE1-213ENST00000448038 CXCL5P42830 114 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms