RNA–Protein interactions for RNA: ENST00000409540.7

INPP4A-204, Transcript of inositol polyphosphate-4-phosphatase type I A, humanhuman

TSL 1 (best) BASIC

Gene INPP4A, Length 3,231 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INPP4A-204ENST00000409540 LITAFQ99732 161 aa12.8□□□□□ -0.36
INPP4A-204ENST00000409540 TRAV12-3A0A0B4J271 114 aa12.8□□□□□ -0.36
INPP4A-204ENST00000409540 SAA4P35542 130 aa12.8□□□□□ -0.36
INPP4A-204ENST00000409540 SPANXCQ9NY87 97 aa12.8□□□□□ -0.36
INPP4A-204ENST00000409540 FANCD2OSQ96PS1 177 aa12.79□□□□□ -0.36
INPP4A-204ENST00000409540 FBN2P35556 2912 aa12.79□□□□□ -0.36
INPP4A-204ENST00000409540 ATOX1O00244 68 aa12.79□□□□□ -0.36
INPP4A-204ENST00000409540 MAP1AP78559 2803 aaPredicted RBP12.79□□□□□ -0.36
INPP4A-204ENST00000409540 TRAV13-1A0A0B4J241 112 aa12.79□□□□□ -0.36
INPP4A-204ENST00000409540 CXCL5P42830 114 aa12.79□□□□□ -0.36
INPP4A-204ENST00000409540 HIST1H4AP62805 103 aaKnown RBP12.79□□□□□ -0.36
INPP4A-204ENST00000409540 TMEM141Q96I45 108 aa12.79□□□□□ -0.36
INPP4A-204ENST00000409540 JPT2Q9H910 190 aa12.79□□□□□ -0.36
INPP4A-204ENST00000409540 TIMM21Q9BVV7 248 aa12.78□□□□□ -0.36
INPP4A-204ENST00000409540 PYGO1Q9Y3Y4 419 aa12.78□□□□□ -0.36
INPP4A-204ENST00000409540 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.78□□□□□ -0.36
INPP4A-204ENST00000409540 SDIM1Q6ZPB5 146 aa12.77□□□□□ -0.36
INPP4A-204ENST00000409540 TIMM17AQ99595 171 aa12.77□□□□□ -0.36
INPP4A-204ENST00000409540 S100A4P26447 101 aaKnown RBP12.77□□□□□ -0.37
INPP4A-204ENST00000409540 NDPQ00604 133 aa12.77□□□□□ -0.37
INPP4A-204ENST00000409540 PHLDA3Q9Y5J5 127 aa12.77□□□□□ -0.37
INPP4A-204ENST00000409540 PRRC2AP48634 2157 aaKnown RBP12.76□□□□□ -0.37
INPP4A-204ENST00000409540 SDHAF1A6NFY7 115 aa12.76□□□□□ -0.37
INPP4A-204ENST00000409540 IGHV3OR16-10A0A075B7F0 116 aa12.75□□□□□ -0.37
INPP4A-204ENST00000409540 UPK3BQ9BT76 320 aa12.75□□□□□ -0.37
INPP4A-204ENST00000409540 CTSGP08311 255 aa12.75□□□□□ -0.37
INPP4A-204ENST00000409540 PEMTQ9UBM1 199 aa12.75□□□□□ -0.37
INPP4A-204ENST00000409540 IGLV11-55A0A075B6I3 123 aa12.75□□□□□ -0.37
INPP4A-204ENST00000409540 A0A0J9YXV3 536 aa12.75□□□□□ -0.37
INPP4A-204ENST00000409540 DAZ2Q13117 558 aaKnown RBP12.75□□□□□ -0.37
INPP4A-204ENST00000409540 DAZ4Q86SG3 579 aaKnown RBP12.75□□□□□ -0.37
INPP4A-204ENST00000409540 DAZ1Q9NQZ3 744 aaKnown RBP12.75□□□□□ -0.37
INPP4A-204ENST00000409540 DAZ3Q9NR90 486 aaKnown RBP12.75□□□□□ -0.37
INPP4A-204ENST00000409540 IGHV3-49A0A0A0MS15 119 aa12.74□□□□□ -0.37
INPP4A-204ENST00000409540 J3QLI3 93 aa12.74□□□□□ -0.37
INPP4A-204ENST00000409540 Q8N9W7 124 aa12.74□□□□□ -0.37
INPP4A-204ENST00000409540 NACAE9PAV3 2078 aa12.74□□□□□ -0.37
INPP4A-204ENST00000409540 A0A0J9YX75 114 aa12.73□□□□□ -0.37
INPP4A-204ENST00000409540 CENPEQ02224 2701 aa12.73□□□□□ -0.37
INPP4A-204ENST00000409540 POLQO75417 2590 aa12.73□□□□□ -0.37
INPP4A-204ENST00000409540 POLR2KP53803 58 aaKnown RBP12.73□□□□□ -0.37
INPP4A-204ENST00000409540 RPL18AQ02543 176 aaKnown RBP12.73□□□□□ -0.37
INPP4A-204ENST00000409540 TMEM61Q8N0U2 210 aa12.73□□□□□ -0.37
INPP4A-204ENST00000409540 ANKRD17O75179 2603 aaKnown RBP12.72□□□□□ -0.37
INPP4A-204ENST00000409540 IGHV7-81A0A0B4J1V7 117 aa12.72□□□□□ -0.37
INPP4A-204ENST00000409540 IGHV3-30-3P0DP02 117 aa12.72□□□□□ -0.37
INPP4A-204ENST00000409540 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
INPP4A-204ENST00000409540 BRD3OSQ6XYD6 125 aa12.72□□□□□ -0.37
INPP4A-204ENST00000409540 TIRAPP58753 221 aa12.71□□□□□ -0.37
INPP4A-204ENST00000409540 IGHV1-69P01742 117 aa12.71□□□□□ -0.37
INPP4A-204ENST00000409540 PTPN13Q12923 2485 aa12.71□□□□□ -0.37
INPP4A-204ENST00000409540 GNRH2O43555 120 aa12.71□□□□□ -0.38
INPP4A-204ENST00000409540 BUB3O43684 328 aa12.71□□□□□ -0.38
INPP4A-204ENST00000409540 KRTAP10-9P60411 292 aa12.7□□□□□ -0.38
INPP4A-204ENST00000409540 C9orf47Q6ZRZ4 202 aa12.7□□□□□ -0.38
INPP4A-204ENST00000409540 DAND5Q8N907 189 aa12.7□□□□□ -0.38
INPP4A-204ENST00000409540 A0A087WVE0 104 aa12.7□□□□□ -0.38
INPP4A-204ENST00000409540 PPP1R17O96001 155 aa12.7□□□□□ -0.38
INPP4A-204ENST00000409540 MSMBP08118 114 aa12.7□□□□□ -0.38
INPP4A-204ENST00000409540 IGHV4-38-2P0DP08 117 aa12.7□□□□□ -0.38
INPP4A-204ENST00000409540 CLPSL1A2RUU4 121 aa12.69□□□□□ -0.38
INPP4A-204ENST00000409540 A8MZ25 164 aa12.69□□□□□ -0.38
INPP4A-204ENST00000409540 LINC00315P59091 139 aa12.69□□□□□ -0.38
INPP4A-204ENST00000409540 LINC00336Q6ZUF6 198 aa12.69□□□□□ -0.38
INPP4A-204ENST00000409540 SERP2Q8N6R1 65 aa12.69□□□□□ -0.38
INPP4A-204ENST00000409540 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■■■■■ 28.5
INPP4A-204ENST00000409540 USP9YO00507 2555 aaPredicted RBP12.69□□□□□ -0.38
INPP4A-204ENST00000409540 IGKV3D-7A0A0C4DH55 119 aa12.69□□□□□ -0.38
INPP4A-204ENST00000409540 VCYO14598 125 aa12.69□□□□□ -0.38
INPP4A-204ENST00000409540 DSCR9P59020 149 aa12.69□□□□□ -0.38
INPP4A-204ENST00000409540 C1orf43Q9BWL3 253 aa12.69□□□□□ -0.38
INPP4A-204ENST00000409540 MIAQ16674 131 aa12.69□□□□□ -0.38
INPP4A-204ENST00000409540 MUC4Q99102 2169 aa12.69□□□□□ -0.38
INPP4A-204ENST00000409540 SUMO4Q6EEV6 95 aa12.68□□□□□ -0.38
INPP4A-204ENST00000409540 NBPF19A0A087WUL8 3843 aa12.68□□□□□ -0.38
INPP4A-204ENST00000409540 C22orf24Q9Y442 160 aa12.68□□□□□ -0.38
INPP4A-204ENST00000409540 F8WDY8 70 aa12.67□□□□□ -0.38
INPP4A-204ENST00000409540 MALP21145 153 aa12.67□□□□□ -0.38
INPP4A-204ENST00000409540 DEFB1P60022 68 aa12.67□□□□□ -0.38
INPP4A-204ENST00000409540 A0A087WWL8 130 aa12.67□□□□□ -0.38
INPP4A-204ENST00000409540 CHD6Q8TD26 2715 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 A0A096LNT2 108 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 B4DSR2 109 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 F5H697 171 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 AVPP01185 164 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 PRO0628Q9UI54 55 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 PKIGQ9Y2B9 76 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 KIF25-AS1Q9Y6Z4 181 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 NXPH4O95158 308 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 RNASE3P12724 160 aaKnown RBP12.66□□□□□ -0.38
INPP4A-204ENST00000409540 PFN2P35080 140 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 NDUFA12Q9UI09 145 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 ABCA12Q86UK0 2595 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 IGHV4OR15-8A0A075B7B6 117 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 A0A087WW49 117 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 BAALC-AS2P0C853 105 aa12.66□□□□□ -0.38
INPP4A-204ENST00000409540 RPL35AP18077 110 aaKnown RBP12.66□□□□□ -0.38
INPP4A-204ENST00000409540 ATP6V0E1O15342 81 aa12.65□□□□□ -0.38
INPP4A-204ENST00000409540 C5orf56Q8N8D9 126 aa12.65□□□□□ -0.38
INPP4A-204ENST00000409540 FHL2Q14192 279 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms