RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TRAV8-3A0A0A6YYJ7 113 aa13.94□□□□□ -0.18
HOXC6-202ENST00000394331 IGF1P05019 195 aa13.94□□□□□ -0.18
HOXC6-202ENST00000394331 TRACP01848 142 aa13.94□□□□□ -0.18
HOXC6-202ENST00000394331 PRSS2P07478 247 aa13.93□□□□□ -0.18
HOXC6-202ENST00000394331 ADAMTSL4-AS1Q5T5F5 129 aa13.93□□□□□ -0.18
HOXC6-202ENST00000394331 NDUFA4O00483 81 aa13.93□□□□□ -0.18
HOXC6-202ENST00000394331 BRD3OSQ6XYD6 125 aa13.93□□□□□ -0.18
HOXC6-202ENST00000394331 IGHV3-64A0A075B6Q5 118 aa13.92□□□□□ -0.18
HOXC6-202ENST00000394331 A0A0J9YXV3 536 aa13.92□□□□□ -0.18
HOXC6-202ENST00000394331 H3BUA1 57 aa13.92□□□□□ -0.18
HOXC6-202ENST00000394331 USMG5Q96IX5 58 aa13.92□□□□□ -0.18
HOXC6-202ENST00000394331 C20orf173Q96LM9 149 aa13.92□□□□□ -0.18
HOXC6-202ENST00000394331 IGHV4-61A0A0C4DH41 118 aa13.91□□□□□ -0.18
HOXC6-202ENST00000394331 C20orf203Q8NBC4 194 aa13.91□□□□□ -0.18
HOXC6-202ENST00000394331 DPH3Q96FX2 82 aa13.91□□□□□ -0.18
HOXC6-202ENST00000394331 IGHV1-58A0A0C4DH39 117 aa13.91□□□□□ -0.18
HOXC6-202ENST00000394331 MRPS36P82909 103 aaKnown RBP13.91□□□□□ -0.18
HOXC6-202ENST00000394331 IGLV4-3A0A075B6K6 122 aa13.91□□□□□ -0.18
HOXC6-202ENST00000394331 GNRH2O43555 120 aa13.91□□□□□ -0.18
HOXC6-202ENST00000394331 CACNA1BQ00975 2339 aa13.9□□□□□ -0.18
HOXC6-202ENST00000394331 FAM222AQ5U5X8 452 aa13.9□□□□□ -0.18
HOXC6-202ENST00000394331 COX7A2LO14548 114 aa13.9□□□□□ -0.18
HOXC6-202ENST00000394331 C10orf105Q8TEF2 133 aa13.9□□□□□ -0.18
HOXC6-202ENST00000394331 NDUFA12Q9UI09 145 aa13.9□□□□□ -0.18
HOXC6-202ENST00000394331 ZNF580Q9UK33 172 aa13.9□□□□□ -0.18
HOXC6-202ENST00000394331 IGHG2P01859 326 aa13.89□□□□□ -0.19
HOXC6-202ENST00000394331 OPRPNQ99935 248 aaPredicted RBP13.89□□□□□ -0.19
HOXC6-202ENST00000394331 UNQ9165/PRO28630Q6UXU0 137 aa13.89□□□□□ -0.19
HOXC6-202ENST00000394331 CCL19Q99731 98 aa13.89□□□□□ -0.19
HOXC6-202ENST00000394331 INAFM2P0DMQ5 153 aa13.88□□□□□ -0.19
HOXC6-202ENST00000394331 PYGO1Q9Y3Y4 419 aa13.88□□□□□ -0.19
HOXC6-202ENST00000394331 hADV29S1A0JD25 119 aa13.87□□□□□ -0.19
HOXC6-202ENST00000394331 MUC4Q99102 2169 aa13.87□□□□□ -0.19
HOXC6-202ENST00000394331 TRBV12-3P01733 135 aa13.87□□□□□ -0.19
HOXC6-202ENST00000394331 LY6EQ16553 131 aa13.87□□□□□ -0.19
HOXC6-202ENST00000394331 Q6ZSV7 163 aa13.87□□□□□ -0.19
HOXC6-202ENST00000394331 MRAPQ8TCY5 172 aa13.87□□□□□ -0.19
HOXC6-202ENST00000394331 A6NDX4 124 aa13.87□□□□□ -0.19
HOXC6-202ENST00000394331 SOCS3O14543 225 aa13.87□□□□□ -0.19
HOXC6-202ENST00000394331 IGHV4-38-2P0DP08 117 aa13.87□□□□□ -0.19
HOXC6-202ENST00000394331 RPL18AQ02543 176 aaKnown RBP13.87□□□□□ -0.19
HOXC6-202ENST00000394331 H3BUX3 64 aa13.86□□□□□ -0.19
HOXC6-202ENST00000394331 BEAN1Q3B7T3 259 aa13.86□□□□□ -0.19
HOXC6-202ENST00000394331 VSIG2Q96IQ7 327 aa13.86□□□□□ -0.19
HOXC6-202ENST00000394331 F5H697 171 aa13.85□□□□□ -0.19
HOXC6-202ENST00000394331 DAZ2Q13117 558 aaKnown RBP13.85□□□□□ -0.19
HOXC6-202ENST00000394331 DAZ4Q86SG3 579 aaKnown RBP13.85□□□□□ -0.19
HOXC6-202ENST00000394331 DUX5Q96PT3 197 aa13.85□□□□□ -0.19
HOXC6-202ENST00000394331 DAZ1Q9NQZ3 744 aaKnown RBP13.85□□□□□ -0.19
HOXC6-202ENST00000394331 DAZ3Q9NR90 486 aaKnown RBP13.85□□□□□ -0.19
HOXC6-202ENST00000394331 AKAP6Q13023 2319 aa13.85□□□□□ -0.19
HOXC6-202ENST00000394331 ADARB2-AS1A8MUL3 147 aa13.85□□□□□ -0.19
HOXC6-202ENST00000394331 M0QY20 66 aa13.85□□□□□ -0.19
HOXC6-202ENST00000394331 UPK3BQ9BT76 320 aa13.85□□□□□ -0.19
HOXC6-202ENST00000394331 SERP2Q8N6R1 65 aa13.84□□□□□ -0.19
HOXC6-202ENST00000394331 IGHV3-11P01762 117 aa13.84□□□□□ -0.19
HOXC6-202ENST00000394331 JPT2Q9H910 190 aa13.83□□□□□ -0.2
HOXC6-202ENST00000394331 F5H768 121 aa13.83□□□□□ -0.2
HOXC6-202ENST00000394331 MSMBP08118 114 aa13.83□□□□□ -0.2
HOXC6-202ENST00000394331 RPL11P62913 178 aaKnown RBP13.83□□□□□ -0.2
HOXC6-202ENST00000394331 CSMD1Q96PZ7 3565 aa13.83□□□□□ -0.2
HOXC6-202ENST00000394331 A0A087WWL8 130 aa13.82□□□□□ -0.2
HOXC6-202ENST00000394331 DEFB104AQ8WTQ1 72 aa13.82□□□□□ -0.2
HOXC6-202ENST00000394331 KLLNB2CW77 178 aa13.82□□□□□ -0.2
HOXC6-202ENST00000394331 TIRAPP58753 221 aa13.82□□□□□ -0.2
HOXC6-202ENST00000394331 TINCRA0A1B0GVN0 87 aa13.81□□□□□ -0.2
HOXC6-202ENST00000394331 IGHV4-30-2A0A087WSY4 118 aa13.81□□□□□ -0.2
HOXC6-202ENST00000394331 BLCAPP62952 87 aa13.81□□□□□ -0.2
HOXC6-202ENST00000394331 Q5XG85 94 aa13.8□□□□□ -0.2
HOXC6-202ENST00000394331 RHPN1-AS1Q9BWJ2 59 aa13.8□□□□□ -0.2
HOXC6-202ENST00000394331 CYSTM1Q9H1C7 97 aa13.8□□□□□ -0.2
HOXC6-202ENST00000394331 C22orf24Q9Y442 160 aa13.8□□□□□ -0.2
HOXC6-202ENST00000394331 SPTBN4Q9H254 2564 aa13.8□□□□□ -0.2
HOXC6-202ENST00000394331 IGLV1-40P01703 118 aa13.8□□□□□ -0.2
HOXC6-202ENST00000394331 KIR2DL5BQ8NHK3 375 aa13.8□□□□□ -0.2
HOXC6-202ENST00000394331 PRRC2AP48634 2157 aaKnown RBP13.8□□□□□ -0.2
HOXC6-202ENST00000394331 COPS9Q8WXC6 57 aa13.8□□□□□ -0.2
HOXC6-202ENST00000394331 ZNF415Q09FC8 603 aa13.79□□□□□ -0.2
HOXC6-202ENST00000394331 FAM104AQ969W3 186 aa13.79□□□□□ -0.2
HOXC6-202ENST00000394331 C9orf85Q96MD7 179 aa13.79□□□□□ -0.2
HOXC6-202ENST00000394331 BAALC-AS2P0C853 105 aa13.79□□□□□ -0.2
HOXC6-202ENST00000394331 OXTP01178 125 aa13.78□□□□□ -0.2
HOXC6-202ENST00000394331 Q6JHZ5 121 aa13.78□□□□□ -0.2
HOXC6-202ENST00000394331 NCOR2Q9Y618 2525 aa13.78□□□□□ -0.2
HOXC6-202ENST00000394331 ABCA2Q9BZC7 2435 aa13.78□□□□□ -0.2
HOXC6-202ENST00000394331 NDUFA1O15239 70 aa13.78□□□□□ -0.2
HOXC6-202ENST00000394331 CD28P10747 220 aa13.77□□□□□ -0.2
HOXC6-202ENST00000394331 B4DSR2 109 aa13.77□□□□□ -0.21
HOXC6-202ENST00000394331 K7EMT4 169 aa13.77□□□□□ -0.21
HOXC6-202ENST00000394331 NPC2P61916 151 aa13.77□□□□□ -0.21
HOXC6-202ENST00000394331 DEFB1P60022 68 aa13.76□□□□□ -0.21
HOXC6-202ENST00000394331 NDUFC2-KCTD14E9PQ53 114 aa13.76□□□□□ -0.21
HOXC6-202ENST00000394331 CFHR3Q02985 330 aa13.76□□□□□ -0.21
HOXC6-202ENST00000394331 CIRBPQ14011 172 aaKnown RBP13.76□□□□□ -0.21
HOXC6-202ENST00000394331 IGKV3-7A0A075B6H7 116 aa13.75□□□□□ -0.21
HOXC6-202ENST00000394331 F6UB75 175 aa13.75□□□□□ -0.21
HOXC6-202ENST00000394331 CHD8Q9HCK8 2581 aa13.75□□□□□ -0.21
HOXC6-202ENST00000394331 LINC00308Q8TCZ7 52 aa13.74□□□□□ -0.21
HOXC6-202ENST00000394331 ASH1LQ9NR48 2969 aaKnown RBP13.74□□□□□ -0.21
HOXC6-202ENST00000394331 C4orf26Q17RF5 130 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms