RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 PRR26Q8N8Z3 221 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 NBASA2RRP1 2371 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 OOSP1A8MZH6 123 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 IGKV1-17P01599 117 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 UBE2D3P61077 147 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 UBE2D2P62837 147 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 RNF185Q96GF1 192 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 PSMG3-AS1Q96PY0 264 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 TIMM21Q9BVV7 248 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 SPTAN1Q13813 2472 aaKnown RBP4.36□□□□□ -1.71
RFC1-202ENST00000381897 ZNF73O43830 326 aaPredicted RBP4.36□□□□□ -1.71
RFC1-202ENST00000381897 WT1P19544 449 aaPredicted RBP4.36□□□□□ -1.71
RFC1-202ENST00000381897 NEXN-AS1Q8NBZ9 246 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 CNFNQ9BYD5 112 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 PRO0461Q9UI25 63 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 S4R3C0 116 aa4.36□□□□□ -1.71
RFC1-202ENST00000381897 MED14OSP0DP75 135 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 ATMQ13315 3056 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 CCDC179H3BU77 68 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 IGHV3-23P01764 117 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 IGHG2P01859 326 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 C1orf229Q6ZS94 237 aaPredicted RBP4.35□□□□□ -1.71
RFC1-202ENST00000381897 LINC00336Q6ZUF6 198 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 RNASE4P34096 147 aaKnown RBP4.35□□□□□ -1.71
RFC1-202ENST00000381897 CRIP1P50238 77 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 UBE2D1P51668 147 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 DUSP14O95147 198 aaKnown RBP4.35□□□□□ -1.71
RFC1-202ENST00000381897 FSTL3O95633 263 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 PLA2G1BP04054 148 aaKnown RBP4.35□□□□□ -1.71
RFC1-202ENST00000381897 RHOHQ15669 191 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 ESRGQ1W209 222 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 ZFP2Q6ZN57 461 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 MGAQ8IWI9 3026 aa4.35□□□□□ -1.71
RFC1-202ENST00000381897 USF3Q68DE3 2245 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 IGHV1-58A0A0C4DH39 117 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 E7EUB6 86 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 K7EIM0 57 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 CD7P09564 240 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 C3orf22Q8N5N4 141 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 BDP1A6H8Y1 2624 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 TRAV13-2A0A0B4J235 113 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 SMG1Q96Q15 3661 aaKnown RBP4.34□□□□□ -1.71
RFC1-202ENST00000381897 TRBV7-1A0A0A6YYK4 115 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 A0A1B0GX51 115 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 LINC00643Q86TS7 51 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 DYNAPQ8N1N2 210 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 KAAG1Q9UBP8 84 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 FAM208BQ5VWN6 2430 aa4.34□□□□□ -1.71
RFC1-202ENST00000381897 TRBV27A0A0K0K1C4 114 aa4.34□□□□□ -1.72
RFC1-202ENST00000381897 PRAC2D3DTV9 90 aa4.34□□□□□ -1.72
RFC1-202ENST00000381897 FOXE3Q13461 319 aa4.34□□□□□ -1.72
RFC1-202ENST00000381897 NFE4Q86UQ8 179 aa4.34□□□□□ -1.72
RFC1-202ENST00000381897 UPK3BQ9BT76 320 aa4.34□□□□□ -1.72
RFC1-202ENST00000381897 A0A0J9YY99 117 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 LOXP28300 417 aaPredicted RBP4.33□□□□□ -1.72
RFC1-202ENST00000381897 PCNX1Q96RV3 2341 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 PTPRQQ9UMZ3 2332 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 MED13Q9UHV7 2174 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 IGHV3-74A0A0B4J1X5 117 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 TRBV30A0A0K0K1B3 111 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 SPINT4Q6UDR6 99 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 C1orf158Q8N1D5 194 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 RBM12B-AS1Q9P1G2 102 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 KIAA1549Q9HCM3 1950 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 TRAV4A0A0B4J268 109 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 IGHV3-66A0A0C4DH42 116 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 TRGV3P03979 118 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 IGHV4-38-2P0DP08 117 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 RPL36AP83881 106 aaKnown RBP4.33□□□□□ -1.72
RFC1-202ENST00000381897 IGFL4Q6B9Z1 124 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 IGHV3-30P01768 117 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 IGHV3-30-5P0DP03 117 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 CSNK1G2-AS1Q8NCQ2 148 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 SERP1Q9Y6X1 66 aa4.33□□□□□ -1.72
RFC1-202ENST00000381897 IGLV4-3A0A075B6K6 122 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 M0R1W7 72 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 C15orf32Q32M92 178 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 MINOS1Q5TGZ0 78 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 C22orf34Q6ZV56 151 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 KLHL30-AS1Q8NEE0 82 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 MINOS1-NBL1R4GNA1 71 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 HCFC1P51610 2035 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 CADP27708 2225 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 IGHV3-64A0A075B6Q5 118 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 B4DSR2 109 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 LINC01554Q52M75 96 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 AGPAT4-IT1Q9H0P7 198 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 IGHV3-35A0A0C4DH35 117 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 IGHV3-33P01772 117 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 C9orf47Q6ZRZ4 202 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 SBSPONQ8IVN8 264 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 DMXL1Q9Y485 3027 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 IGLV11-55A0A075B6I3 123 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 TRAV12-3A0A0B4J271 114 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 I3L3M4 83 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 PRB1P04280 392 aa4.32□□□□□ -1.72
RFC1-202ENST00000381897 LYPD2Q6UXB3 125 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms