RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 RS1O15537 224 aa7.03□□□□□ -1.28
CAPN3-201ENST00000318023 P0DMU3 169 aa7.03□□□□□ -1.28
CAPN3-201ENST00000318023 FAM231AP0DMU4 169 aa7.03□□□□□ -1.28
CAPN3-201ENST00000318023 FAM231CP0DMU5 169 aa7.03□□□□□ -1.28
CAPN3-201ENST00000318023 ERCC8Q13216 396 aa7.03□□□□□ -1.28
CAPN3-201ENST00000318023 C10orf99Q6UWK7 81 aa7.03□□□□□ -1.28
CAPN3-201ENST00000318023 MUSTN1Q8IVN3 82 aa7.03□□□□□ -1.28
CAPN3-201ENST00000318023 H3BRN7 92 aa7.03□□□□□ -1.28
CAPN3-201ENST00000318023 IGLV2-23P01705 113 aa7.03□□□□□ -1.28
CAPN3-201ENST00000318023 RNASE1P07998 156 aaKnown RBP7.03□□□□□ -1.28
CAPN3-201ENST00000318023 CFHR4Q92496 578 aa7.03□□□□□ -1.28
CAPN3-201ENST00000318023 TOMM6Q96B49 74 aa7.03□□□□□ -1.28
CAPN3-201ENST00000318023 COX7CP15954 63 aa7.02□□□□□ -1.29
CAPN3-201ENST00000318023 LINC01006Q8NI28 216 aa7.02□□□□□ -1.29
CAPN3-201ENST00000318023 RPL39LQ96EH5 51 aaKnown RBP7.02□□□□□ -1.29
CAPN3-201ENST00000318023 CNFNQ9BYD5 112 aa7.02□□□□□ -1.29
CAPN3-201ENST00000318023 NACAE9PAV3 2078 aa7.02□□□□□ -1.29
CAPN3-201ENST00000318023 ZNF833PQ6ZTB9 187 aa7.02□□□□□ -1.29
CAPN3-201ENST00000318023 DPH3Q96FX2 82 aa7.02□□□□□ -1.29
CAPN3-201ENST00000318023 IGHV3OR16-8A0A075B7F1 116 aa7.02□□□□□ -1.29
CAPN3-201ENST00000318023 Q5XG85 94 aa7.02□□□□□ -1.29
CAPN3-201ENST00000318023 FAM110DQ8TAY7 271 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-201ENST00000318023 FAM240AA0A1B0GVK7 77 aa7.01□□□□□ -1.29
CAPN3-201ENST00000318023 CRYGDP07320 174 aa7.01□□□□□ -1.29
CAPN3-201ENST00000318023 RPL27AP46776 148 aaKnown RBP7.01□□□□□ -1.29
CAPN3-201ENST00000318023 RPS28P62857 69 aaKnown RBP7.01□□□□□ -1.29
CAPN3-201ENST00000318023 LYPD1Q8N2G4 141 aa7.01□□□□□ -1.29
CAPN3-201ENST00000318023 RNF125Q96EQ8 232 aa7.01□□□□□ -1.29
CAPN3-201ENST00000318023 IGLV4-69A0A075B6H9 119 aa7.01□□□□□ -1.29
CAPN3-201ENST00000318023 TRAV8-3A0A0A6YYJ7 113 aa7.01□□□□□ -1.29
CAPN3-201ENST00000318023 ODF3BA8MYP8 253 aa7.01□□□□□ -1.29
CAPN3-201ENST00000318023 IGLV1-47P01700 117 aa7.01□□□□□ -1.29
CAPN3-201ENST00000318023 MRGPRG-AS1Q2M3A8 158 aa7.01□□□□□ -1.29
CAPN3-201ENST00000318023 SPANXN1Q5VSR9 72 aa7.01□□□□□ -1.29
CAPN3-201ENST00000318023 FBN3Q75N90 2809 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 TRACP01848 142 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 VMA21Q3ZAQ7 101 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 C9orf139Q6ZV77 190 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 C11orf21Q9P2W6 132 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 IGKV3D-20A0A0C4DH25 116 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 J3QQQ9 107 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 LGALS3P17931 250 aaKnown RBP7□□□□□ -1.29
CAPN3-201ENST00000318023 NPC2P61916 151 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 ORMDL2Q53FV1 153 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 ZNF491Q8N8L2 437 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 FAM19A4Q96LR4 140 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 C2orf48Q96LS8 159 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 KRTAP10-3P60369 221 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 AMELXQ99217 191 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 C1orf43Q9BWL3 253 aa7□□□□□ -1.29
CAPN3-201ENST00000318023 A0A0B4J2C4 111 aa6.99□□□□□ -1.29
CAPN3-201ENST00000318023 ADARB2-AS1A8MUL3 147 aa6.99□□□□□ -1.29
CAPN3-201ENST00000318023 CRYGAP11844 174 aa6.99□□□□□ -1.29
CAPN3-201ENST00000318023 SUMO2P61956 95 aaKnown RBP6.99□□□□□ -1.29
CAPN3-201ENST00000318023 ZNRF2Q8NHG8 242 aa6.99□□□□□ -1.29
CAPN3-201ENST00000318023 PKIGQ9Y2B9 76 aa6.99□□□□□ -1.29
CAPN3-201ENST00000318023 IGHV1-3A0A0C4DH29 117 aa6.99□□□□□ -1.29
CAPN3-201ENST00000318023 PRAC2D3DTV9 90 aa6.99□□□□□ -1.29
CAPN3-201ENST00000318023 TGP01266 2768 aa6.99□□□□□ -1.29
CAPN3-201ENST00000318023 TRAV12-3A0A0B4J271 114 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 IMUPQ9GZP8 106 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 JPT2Q9H910 190 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 ICOSQ9Y6W8 199 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 CLPSL1A2RUU4 121 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 H3BT86 120 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 TSHBP01222 138 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 PRSS2P07478 247 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 RHOHQ15669 191 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 ZNF580Q9UK33 172 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 M0R381 172 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 PRB2P02812 416 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-201ENST00000318023 RPL39P62891 51 aaKnown RBP6.98□□□□□ -1.29
CAPN3-201ENST00000318023 RNF182Q8N6D2 247 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 SPATA3Q8NHX4 192 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 MRAPQ8TCY5 172 aa6.98□□□□□ -1.29
CAPN3-201ENST00000318023 TRAV13-1A0A0B4J241 112 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 IGHV3-35A0A0C4DH35 117 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 TRBV30A0A0K0K1B3 111 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 TMEM223A0PJW6 202 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 I3L2K1 104 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 MGPP08493 103 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 CD28P10747 220 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 MINOS1Q5TGZ0 78 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 MINOS1-NBL1R4GNA1 71 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 TMEM89A2RUT3 159 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 A6NDX4 124 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 TP53TG1Q9Y2A0 90 aa6.97□□□□□ -1.29
CAPN3-201ENST00000318023 IGHV7-4-1A0A0J9YVY3 117 aa6.96□□□□□ -1.29
CAPN3-201ENST00000318023 RPL35AP18077 110 aaKnown RBP6.96□□□□□ -1.29
CAPN3-201ENST00000318023 EDN2P20800 178 aa6.96□□□□□ -1.29
CAPN3-201ENST00000318023 PYGO1Q9Y3Y4 419 aa6.96□□□□□ -1.29
CAPN3-201ENST00000318023 IGHV3-23P01764 117 aa6.96□□□□□ -1.3
CAPN3-201ENST00000318023 PDE6HQ13956 83 aa6.96□□□□□ -1.3
CAPN3-201ENST00000318023 LINC00643Q86TS7 51 aa6.96□□□□□ -1.3
CAPN3-201ENST00000318023 TEX22C9J3V5 150 aa6.96□□□□□ -1.3
CAPN3-201ENST00000318023 KRTAP21-3Q3LHN1 58 aa6.96□□□□□ -1.3
CAPN3-201ENST00000318023 COX8CQ7Z4L0 72 aa6.96□□□□□ -1.3
CAPN3-201ENST00000318023 ZNF702PQ9H963 129 aa6.96□□□□□ -1.3
CAPN3-201ENST00000318023 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-201ENST00000318023 G3V318 75 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms