RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Nup62Q63850 526 aa12.36□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Glrx5Q80Y14 152 aa12.36□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Pgam5Q8BX10 288 aa12.36□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Fam24aQ8CF27 98 aa12.36□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Olfr958Q8VEY3 312 aa12.36□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Dok5Q91ZM9 306 aa12.36□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Rnd2Q9QYM5 227 aa12.36□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Pf4Q9Z126 105 aa12.36□□□□□ -0.43
Ubp1-206ENSMUST00000216558 OtogO55225 2910 aa12.35□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Trav4-4-dv10A0A075B651 110 aa12.35□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Gm37388A0A0A6YY46 143 aa12.35□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Fut9O88819 359 aa12.35□□□□□ -0.43
Ubp1-206ENSMUST00000216558 NdpP48744 131 aa12.35□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Smim6Q3U0I6 56 aa12.35□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Olfr43Q7TRX1 313 aa12.35□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Ido2Q8R0V5 405 aa12.35□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Pard6aQ9Z101 346 aa12.35□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Prpf8Q99PV0 2335 aaKnown RBP12.35□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Nkx6-2D3Z4R4 277 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Gm21775J3KMK6 180 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Cldn1O88551 211 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Reg1P43137 165 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 F7P70375 446 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 5730522E02RikQ5SP45 163 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Rsl1Q7M6Y1 485 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Olfr1535Q7TQU0 326 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Fam78bQ8BQN5 261 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Vmn1r230Q8R2A2 316 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Ms4a6dQ99N07 247 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Fbxo24Q9D417 589 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Bola1Q9D8S9 137 aaKnown RBP12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Sult1b1Q9QWG7 299 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Mast4Q811L6 2618 aa12.34□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Ighv6-4A0A0A6YX19 119 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Trav23A0A0G2JG17 115 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Gm45800A0A1B0GT24 152 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Gm5108J3QP01 101 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Pde6dO55057 150 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Cela2aP05208 271 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 FusP56959 518 aaKnown RBP12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Prok1Q14A28 105 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Rhox4fQ2MDF8 205 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Nbl1Q61477 178 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Smim19Q80ZU4 107 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Tspan9Q8BJU2 239 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Olfr654Q8VF27 341 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Rnf2Q9CQJ4 336 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Gpa33Q9JKA5 319 aa12.33□□□□□ -0.43
Ubp1-206ENSMUST00000216558 Thap8E9Q695 213 aa12.33□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Gm15130F6PYN5 206 aa12.33□□□□□ -0.44
Ubp1-206ENSMUST00000216558 SeleQ00690 612 aa12.33□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Phox2aQ62066 280 aa12.33□□□□□ -0.44
Ubp1-206ENSMUST00000216558 B430305J03RikQ8BQQ8 176 aa12.33□□□□□ -0.44
Ubp1-206ENSMUST00000216558 RpeQ8VEE0 228 aa12.33□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Rpp25lQ99JH1 163 aa12.33□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Olfr972Q9EQA2 314 aa12.33□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Usp9xP70398 2559 aaKnown RBP12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Col7a1Q63870 2944 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Gm28845A0A087WR76 214 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Vmn1r194J3JS27 296 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Fut1O09160 376 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 AdtrpQ8C138 230 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 AmtQ8CFA2 403 aaKnown RBP12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Olfr1475Q8VEV6 314 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Q9CX25 107 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Gng10Q9CXP8 68 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 TecrQ9CY27 308 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 PigpQ9JHG1 132 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Crybb3Q9JJU9 211 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Pfdn5Q9WU28 154 aa12.32□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Trbv31A0A075B5J5 111 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Ighv1-39A0A075B5V5 117 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Trav13n-4A0A0G2JG01 110 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Gm15557A6PWY0 234 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Q497N7 227 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Gm9913Q8BQQ2 135 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Cldn16Q925N4 235 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Atp6v0e1Q9CQD8 81 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Mrpl18Q9CQL5 180 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Q9CX63 252 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Necap2Q9D1J1 266 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Rhox4bQ9JI43 205 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Med13lQ6JPI3 2207 aa12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Prrc2cQ3TLH4 2846 aaKnown RBP12.31□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Ighv1-58A0A075B5W9 117 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Nkx2-8O70584 235 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 GzmfP08883 248 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Lynx1P0DP60 116 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Csn2P10598 231 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Rab19P35294 217 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 SrstQ06666 185 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Bst1Q64277 311 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Cd52Q64389 74 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 HaaoQ78JT3 286 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 RhebQ921J2 184 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Fam210bQ9D8B6 190 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 EppinQ9DA01 134 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 1700008P02RikQ9DAJ8 175 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 Rnase4Q9JJH1 148 aa12.3□□□□□ -0.44
Ubp1-206ENSMUST00000216558 ArtnQ9Z0L2 224 aa12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 60.2 ms