RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Slc25a35Q5SWT3 300 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Cisd1Q91WS0 108 aaKnown RBP7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Ceacam11Q9D0Z8 303 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Clec5aQ9R007 190 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Mixl1Q9WUI0 231 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Arhgap21Q6DFV3 1944 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Trav18A0A075B656 109 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Igkv4-68A0A0B4J1I7 117 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 CortP56469 109 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Lhx2Q9Z0S2 406 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Trav17A0A075B655 113 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Vmn1r232A2RTT5 351 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Cd209gD3Z5D4 194 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Irf2bp2E9Q1P8 570 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Tex54G3UW99 86 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Plscr4P58196 326 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Col9a1Q05722 921 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Fam168aQ8BGZ2 244 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Chac2Q9CQG1 178 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Ly96Q9JHF9 160 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 2210407C18RikQ6YI28 220 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Q80X32 188 aaKnown RBP7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Loxl4Q924C6 757 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Tnfrsf23Q9ER63 176 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Tcf23Q9JLR5 209 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 P01801 115 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Cd8bP10300 213 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Bdp1Q571C7 2467 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Leap2Q91V13 76 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Q9CQM1 111 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm45871A0A1B0GRI9 540 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm14124A2AU83 715 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Fam240bJ3QMB3 78 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Atp6v0cP63082 155 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Srsf2Q62093 221 aaKnown RBP7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Rhno1Q8K3A4 235 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Atp23Q9CWQ3 201 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Tmem160Q9D938 188 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Trem3Q9JKE1 183 aa7.79□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Vmn1r158G3UY92 307 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm21719J3KMI9 230 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Scgb2a2J3KMP9 96 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Shisal2bQ9D1Y9 158 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Fxyd7P59648 80 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm12888Q3UW77 119 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Olfr1012Q8VFJ7 311 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Fgf16Q9ESL8 207 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm7257D3YX25 99 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Nhlrc3Q8CCH2 347 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Zfp951A0A087WRH0 451 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Ighv9-3A0A0B4J1J5 117 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 MpzP27573 248 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Pax9P47242 342 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Olfr139Q60891 315 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Vgll4Q80V24 287 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Vmn1r197Q8R265 298 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Pnrc2Q9CR73 140 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Cbln1Q9R171 193 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Ms4a12A0A087WSB9 263 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm5741B2RVA4 72 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Zfp36l2P23949 484 aaKnown RBP7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Rpl32P62911 135 aaKnown RBP7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Supt4h1aP63271 117 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 C1qtnf4Q8R066 326 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Klk7Q91VE3 249 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Dock10Q8BZN6 2150 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Rpl35aO55142 110 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Snrpd3P62320 126 aaKnown RBP7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Gm5615Q3UW02 101 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Psg27Q497W2 474 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Spink6Q8BT20 105 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Slc37a1Q8R070 531 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Mcrip2Q9CQB2 160 aaKnown RBP7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Fam162bQ9CX19 157 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 IcosQ9WVS0 200 aa7.78□□□□□ -1.16
Scn8a-213ENSMUST00000201549 Bak1O08734 209 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 SellP18337 372 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Nkain3Q3URJ8 181 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Pxt1Q8K459 51 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Tmem183Q9JJB9 375 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Vmn1r149E9PWL6 307 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Vmn1r101E9Q365 307 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 NgfP01139 241 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Cxcl10P17515 98 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Rpl31P62900 125 aaKnown RBP7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Olfr498Q8VEW2 330 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 DnlzQ9D113 177 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Rai1Q61818 1889 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Zfp977L7N2E7 438 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Rpl27aP14115 148 aaKnown RBP7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Gstp2P46425 210 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Nr2c2apQ3TV70 140 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Olfr355Q8VFP6 310 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Map1lc3aQ91VR7 121 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Cela3bQ9CQ52 269 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Prr12E9PYL2 2035 aaKnown RBP7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Klf7Q99JB0 301 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Ssbp3Q9D032 388 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Wbp2nlQ9D529 359 aa7.77□□□□□ -1.17
Scn8a-213ENSMUST00000201549 Prss8Q9ESD1 342 aa7.77□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 160 ms