RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Klk1b21Q61759 261 aa10.25□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 OstcQ78XF5 149 aa10.25□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Zfp420Q7TMN8 578 aa10.25□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Rnps1Q99M28 305 aaKnown RBP10.25□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Nit2Q9JHW2 276 aa10.25□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Arfgef3Q3UGY8 2170 aa10.25□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Col12a1Q60847 3120 aa10.25□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Rom1P32958 351 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Tmem167bQ80X45 74 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 9930022D16RikQ8BG27 128 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Prb1Q91X93 504 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 CompQ9R0G6 755 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Olfr1458A0A1L1SSD5 307 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Inafm1E9PV59 130 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Vmn1r1E9PVR6 306 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 C2cd4dP0CG09 341 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Lyplal1Q3UFF7 239 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Tmem204Q7TQI0 226 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Olfr498Q8VEW2 330 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Leprotl1Q9CQ74 131 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Olfr961Q9EQ84 314 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 NgbQ9ER97 151 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Mnx1Q9QZW9 404 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Mpdu1Q9R0Q9 247 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Trav6-1A0A075B5Z8 112 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Gm6594J3QM43 95 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Gm3512L7N206 146 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 SdcbpO08992 299 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 P01796 113 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 P01797 113 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 P01799 113 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Oprk1P33534 380 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Srsf6Q3TWW8 339 aaKnown RBP10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 BtlaQ7TSA3 306 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Hoxc12Q8K5B8 280 aa10.24□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Igkv4-51A0N8I8 119 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Gm27021M0QWE2 156 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 V1rd19Q3KNP5 305 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Prrg4Q8BGN6 226 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Dtx2Q8R3P2 619 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Pxmp4Q9JJW0 212 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Trbv14A0A140T8L9 115 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Olfr178E9Q9T3 319 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Tnfsf12O54907 249 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 ClcP97400 68 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Pate2Q3UW31 111 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Prdm6Q3UZD5 596 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Dazap1Q9JII5 406 aaKnown RBP10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Adam11Q9R1V4 773 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Osr1Q9WVG7 266 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Gm28171A0A087WQ19 227 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Gm21882J3QN86 361 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Foxf2O54743 446 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Tnfrsf1aP25118 454 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Gng3P63216 75 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 MiaQ61865 130 aa10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Cnn3Q9DAW9 330 aaKnown RBP10.23□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Trav17A0A075B655 113 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Ighv5-16A0A0B4J1P4 117 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Ighv8-9A0A0G2JET1 119 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 A0A286YDM5 308 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Bcl2P10417 236 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Dynlrb1P62627 96 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Klf14Q19A41 325 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Gm94Q3V2D2 93 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Defa24Q5G865 93 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Plk3Q60806 631 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Tnfrsf13bQ9ET35 249 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 PkdrejQ9Z0T6 2126 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Trav12d-1A0N8R0 115 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Mfge8P21956 463 aaKnown RBP10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Reg1P43137 165 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Olfr1419Q7TQS2 343 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Atp6v0bQ91V37 205 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Cldn16Q925N4 235 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Tspo2Q9CRZ8 162 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Hrct1Q9D6B9 109 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Hspb8Q9JK92 196 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Igkv14-126A0A075B5K0 117 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Ighv1-18A0A0A6YXN4 117 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Rnase9P60154 184 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Ube2l3P68037 154 aaKnown RBP10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Bsph1Q3UW26 133 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Gm10840Q3V2K9 103 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Vmn1r197Q8R265 298 aa10.22□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Trav13n-4A0A0G2JG01 110 aa10.21□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Ca1P13634 261 aa10.21□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Olfr958Q8VEY3 312 aa10.21□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Cspg4Q8VHY0 2327 aa10.21□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Plxnb1Q8CJH3 2119 aa10.21□□□□□ -0.77
Pcdh1-202ENSMUST00000159405 Ighv5-17A0A075B5R1 117 aa10.21□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Trav7n-4A0A075B620 113 aa10.21□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Siglec15A7E1W8 342 aa10.21□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Plcxd2B2RXA1 340 aa10.21□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Defb20Q30KP3 96 aa10.21□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Ms4a13Q5FWC3 203 aa10.21□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Zic3Q62521 466 aa10.21□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Ccsmst1Q6RUT7 136 aa10.21□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Vgll4Q80V24 287 aa10.21□□□□□ -0.78
Pcdh1-202ENSMUST00000159405 Acp1Q9D358 158 aa10.21□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms