RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Gm11110Q3U4K9 109 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Shisa6Q3UH99 525 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Morn2Q6UL01 79 aa9.21□□□□□ -0.93
Scn8a-203ENSMUST00000108908 Trav21-dv12A0A075B6C4 109 aa9.21□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm36368A0A1D5RLK8 91 aa9.21□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm12355A2A4X6 163 aa9.21□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm10073E9Q3T0 114 aa9.21□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Srsf3P84104 164 aaKnown RBP9.21□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Rhno1Q8K3A4 235 aa9.21□□□□□ -0.94
Scn8a-203ENSMUST00000108908 ChodlQ9CXM0 273 aa9.21□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Vmn1r54Q9EPB8 315 aa9.21□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Cpsf4lE9Q2N0 280 aa9.21□□□□□ -0.94
Scn8a-203ENSMUST00000108908 RprmlQ3URD2 117 aa9.21□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Oosp2Q4FZG8 168 aa9.21□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Dock10Q8BZN6 2150 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Trav6d-5A0A075B6B9 112 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 6430628N08RikA0A0U1RQ45 177 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Glrx5Q80Y14 152 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 SostQ99P68 211 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Ighv1-7A0A075B5T7 117 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Trav16A0A075B653 116 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Ighv1-20A0A0A6YX66 117 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Atg101Q9D8Z6 218 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Zfpl1Q9DB43 310 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Zdhhc16Q9ESG8 361 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Phlda3Q9WV95 125 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Znf260Q62513 407 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Dynlt3P56387 116 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Neurog3P70661 214 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Folr2Q05685 251 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm21394Q497R7 227 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Tmem100Q9CQG9 134 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Ly6g6fB2RXM6 300 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Fgf5P15656 264 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm10762Q9CZN6 115 aa9.2□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr322Q5NCC8 327 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 SlaQ60898 281 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 MyofQ69ZN7 2048 aaKnown RBP9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Zfp420Q7TMN8 578 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Tm2d3Q8BJ83 261 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm21983D6RFS9 131 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Cdx1P18111 268 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Cdcp2Q8BQH6 427 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Anapc10Q8K2H6 185 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr1258Q8VGN6 311 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Igh-VJ558P01758 117 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Mbnl2Q8C181 373 aaKnown RBP9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr223Q8VF69 319 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Ms4a8Q99N10 290 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr1369-ps1A0A140T8K7 317 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Prss32E9Q409 334 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Foxf2O54743 446 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Nkx2-8O70584 235 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr1195Q8VG21 308 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Chchd1Q9CQA6 118 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Lypd8Q9D7S0 255 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 MNCb-2875Q9DCB3 74 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Wdr31Q9JHB4 367 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Zfhx2Q2MHN3 2562 aa9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Prr12E9PYL2 2035 aaKnown RBP9.19□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm6871L7N248 545 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Efna4O08542 206 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Pax9P47242 342 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Pgpep1lQ9CWB5 130 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 P18526 117 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Klf14Q19A41 325 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr904Q7TRC9 310 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Prelid3aQ8VE85 172 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Timm23Q9WTQ8 209 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Trav7-5A0A0G2JFX6 112 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm16442D3YZG3 307 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm28372A0A087WNV0 220 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Il2raP01590 268 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm4792Q569Q2 183 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr1178Q7TR20 323 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 March11Q8CBH7 400 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 1700084M14RikB1AT01 78 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm7849D3YX03 116 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 SpxD3Z752 116 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 NgfP01139 241 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 CirbpP60824 172 aaKnown RBP9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Foxr2Q3UM89 302 aa9.18□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Smim13E9Q942 88 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Ripply2Q2WG76 128 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 St6galnac6Q9JM95 333 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 A0A1L1SR50 188 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr235E9Q9Z6 312 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Ly6lH3BJG9 140 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Nutf2P61971 127 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Rnf125Q9D9R0 233 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Omt2bD3YX29 119 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Sumo2P61957 95 aaKnown RBP9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr148Q60887 310 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Ss18Q62280 418 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Prima1Q810F0 153 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 D630044L22RikQ8C701 164 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Cox19Q8K0C8 92 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Siglec12Q91Y57 467 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 E430018J23RikE9PZQ8 461 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Irf2bp2E9Q1P8 570 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms