RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gm5468Q8C3D3 155 aa14.9□□□□□ -0.02
Trim47-202ENSMUST00000106441 Olfr959Q9EQ86 311 aa14.9□□□□□ -0.02
Trim47-202ENSMUST00000106441 CnmdQ9Z1F6 334 aa14.9□□□□□ -0.02
Trim47-202ENSMUST00000106441 NacaP70670 2187 aaKnown RBP14.89□□□□□ -0.03
Trim47-202ENSMUST00000106441 Trav23A0A0G2JG17 115 aa14.89□□□□□ -0.03
Trim47-202ENSMUST00000106441 Gm17654F7AXR3 209 aa14.89□□□□□ -0.03
Trim47-202ENSMUST00000106441 Olfr1154L7MU57 310 aa14.89□□□□□ -0.03
Trim47-202ENSMUST00000106441 Wt1P22561 449 aa14.89□□□□□ -0.03
Trim47-202ENSMUST00000106441 Fbxl7Q5BJ29 491 aa14.89□□□□□ -0.03
Trim47-202ENSMUST00000106441 Znf146Q8BQN6 292 aa14.89□□□□□ -0.03
Trim47-202ENSMUST00000106441 Vmn1r222Q8R269 308 aa14.89□□□□□ -0.03
Trim47-202ENSMUST00000106441 Stpg1Q9D2F5 341 aa14.89□□□□□ -0.03
Trim47-202ENSMUST00000106441 Q9D8L0 127 aa14.89□□□□□ -0.03
Trim47-202ENSMUST00000106441 ApcsP12246 224 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Il3raP26952 396 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Sumo1P63166 101 aaKnown RBP14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Q6DIA7 600 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Zfp420Q7TMN8 578 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Cox19Q8K0C8 92 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Alkbh6Q8K2U2 238 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 RetnlgQ8K426 117 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Olfr822Q8VFU1 312 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Fam208bQ5DTT3 2382 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Tmem139E9PX92 214 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Tnfsf12O54907 249 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 P01915 264 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Pate4Q09098 99 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Prickle3Q80VL3 624 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Olfr1183Q8VFF8 303 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 TecrQ9CY27 308 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Ceacam11Q9D0Z8 303 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 Tnfrsf13cQ9D8D0 175 aa14.88□□□□□ -0.03
Trim47-202ENSMUST00000106441 9830107B12RikD3Z5D6 160 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Tctn2Q2MV57 700 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Isg15Q64339 161 aaKnown RBP14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Stpg2Q8C8J0 561 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Olfr1453Q8VFX0 307 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Mapk1ip1Q9D7G9 263 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Nubp1Q9R060 320 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Ighv6-3A0A075B5T2 118 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Ighv1-15A0A0A6YXA5 117 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Gm9376G3UW68 176 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Gnb4P29387 340 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Cdkn1bP46414 197 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Folr2Q05685 251 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Tmem52bQ0VBF2 186 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Fam222bQ6P539 562 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Srsf1Q6PDM2 248 aaKnown RBP14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Rph3alQ768S4 302 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Defb3Q9WTL0 63 aa14.87□□□□□ -0.03
Trim47-202ENSMUST00000106441 Vmn1r224E9PWK2 298 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 Ascl2O35885 263 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 Rdh16O54909 317 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 Cxcl13O55038 109 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 P18526 117 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 Spam1P48794 512 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 OstcQ78XF5 149 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 Olfr963Q7TRA9 311 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 Nrn1Q8CFV4 142 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 Mrpl42Q9CPV3 142 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 Tmem167aQ9CR64 72 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 Cxcr6Q9EQ16 351 aa14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 DspE9Q557 2883 aaKnown RBP14.86□□□□□ -0.03
Trim47-202ENSMUST00000106441 Ifna5P07349 189 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Sult1a1P52840 291 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Tas2r114Q7M722 309 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Rpp25lQ99JH1 163 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Fkbp11Q9D1M7 201 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Ly96Q9JHF9 160 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Gm12728V9GX31 77 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Zfyve26Q5DU37 2529 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Ighv5-17A0A075B5R1 117 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Olfr218E9PWV2 313 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Casp6O08738 276 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Ren2P00796 401 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Jpt2Q6PGH2 190 aaKnown RBP14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Nit1Q8VDK1 323 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Olfr1258Q8VGN6 311 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Q9CQ90 155 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 MmdQ9CQY7 238 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Tmem190Q9D2E9 166 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 MNCb-2875Q9DCB3 74 aa14.85□□□□□ -0.03
Trim47-202ENSMUST00000106441 Zfp114B2RRA8 586 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Gm5741B2RVA4 72 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Vmn1r119E9Q4H3 307 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Cldn34c3J3QJW5 233 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Cldn34c2J3QNM1 233 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Cox6a1P43024 111 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 AmelxP63277 210 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Txn2P97493 166 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Loxl1P97873 607 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Ccl12Q62401 104 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Cldn34c1Q8K193 234 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Plppr2Q8VCY8 343 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Actl6bQ99MR0 426 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Prss37Q9DAA4 237 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Ctnnbip1Q9JJN6 81 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Ighv5-12-4A0A0A6YWG4 117 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 Zfp708F8VPP0 541 aa14.84□□□□□ -0.03
Trim47-202ENSMUST00000106441 P01788 123 aa14.84□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms