RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Hist1h2bcQ6ZWY9 126 aaKnown RBP8.24□□□□□ -1.09
Syne1-201ENSMUST00000041639 Tmem100Q9CQG9 134 aa8.24□□□□□ -1.09
Syne1-201ENSMUST00000041639 3100002H09RikQ9CXW6 140 aa8.24□□□□□ -1.09
Syne1-201ENSMUST00000041639 ChtopQ9CY57 249 aaKnown RBP8.24□□□□□ -1.09
Syne1-201ENSMUST00000041639 Dnase2bQ9QY48 354 aa8.24□□□□□ -1.09
Syne1-201ENSMUST00000041639 Myo7bQ99MZ6 2113 aa8.24□□□□□ -1.09
Syne1-201ENSMUST00000041639 Sox21Q811W0 276 aa8.24□□□□□ -1.09
Syne1-201ENSMUST00000041639 Prelid3aQ8VE85 172 aa8.24□□□□□ -1.09
Syne1-201ENSMUST00000041639 Frem1Q684R7 2191 aa8.24□□□□□ -1.09
Syne1-201ENSMUST00000041639 Zswim8Q3UHH1 1832 aaKnown RBP8.24□□□□□ -1.09
Syne1-201ENSMUST00000041639 Trav6d-5A0A075B6B9 112 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Trbv1A0A0B4J1G7 116 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Igsf23B2RTN2 239 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Dtx1Q61010 627 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 NracQ8BNX7 165 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Ovol2Q8CIV7 274 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 PtprdQ64487 1912 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 TbpP29037 316 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Tcf15Q60756 195 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Olfr1380Q7TQT5 311 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Tmem129Q8K304 362 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Hdgfl3Q9JMG7 202 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Gm45861A0A1B0GRY3 1923 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Siglec15A7E1W8 342 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Olfr235E9Q9Z6 312 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Nkain3Q3URJ8 181 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Oosp2Q4FZG8 168 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Smad7O35253 426 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Ca2P00920 260 aaKnown RBP8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 ElnP54320 860 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Zic3Q62521 466 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Znf474Q6V5K9 347 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Tmem101Q91VP7 257 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Jmjd1cQ69ZK6 2350 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Prpf8Q99PV0 2335 aaKnown RBP8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Ank3G5E8K5 1961 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Zcchc24B2RVL6 241 aaKnown RBP8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 eef1akmt3D3YWP0 232 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Iglc3P01845 104 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 LgalslbQ7TPX9 165 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Tex36Q9D5N9 219 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Pappa2E9PZ87 1789 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Pate4Q09098 99 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Pilrb2Q2YFS1 225 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 Stac2Q8R1B0 408 aa8.23□□□□□ -1.09
Syne1-201ENSMUST00000041639 ThadaA8C756 1938 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 LtaP09225 202 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Sh3bgrl3Q91VW3 93 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Tmem219Q9D123 240 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Trdv2-1A0A0G2JGB9 116 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 MpzP27573 248 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Vmn1r70Q8R254 298 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Trav16nA0A075B634 117 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Ighv7-2A0A0A6YX91 119 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Cox6cQ9CPQ1 76 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Gm36368A0A1D5RLK8 91 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 CfdP03953 259 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 C1ql4Q4ZJM9 238 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Q8VE95 218 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 DdtO35215 118 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Igh-3P01867 404 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Rnf115Q9D0C1 305 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Spcs1Q9D958 161 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Cnn3Q9DAW9 330 aaKnown RBP8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Fgf16Q9ESL8 207 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Arpc1aQ9R0Q6 370 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 Lhx2Q9Z0S2 406 aa8.22□□□□□ -1.09
Syne1-201ENSMUST00000041639 YrdcQ3U5F4 280 aa8.21□□□□□ -1.09
Syne1-201ENSMUST00000041639 AgaQ64191 346 aa8.21□□□□□ -1.09
Syne1-201ENSMUST00000041639 Muc15Q8C6Z1 331 aa8.21□□□□□ -1.09
Syne1-201ENSMUST00000041639 Carhsp1Q9CR86 148 aa8.21□□□□□ -1.09
Syne1-201ENSMUST00000041639 Brca1P48754 1812 aa8.21□□□□□ -1.09
Syne1-201ENSMUST00000041639 Cops9Q3U898 57 aa8.21□□□□□ -1.09
Syne1-201ENSMUST00000041639 Rpl36-ps4A0A140T8U4 117 aa8.21□□□□□ -1.09
Syne1-201ENSMUST00000041639 Gm21616B6ZB74 166 aa8.21□□□□□ -1.09
Syne1-201ENSMUST00000041639 F11rO88792 300 aa8.21□□□□□ -1.09
Syne1-201ENSMUST00000041639 Loxl2P58022 776 aa8.21□□□□□ -1.09
Syne1-201ENSMUST00000041639 Sec16aA2AIX1 2377 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Iqcf6G3UWF2 157 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Tnfsf11O35235 316 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 H2-DMb2Q31099 261 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 PcolceQ61398 468 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Spred3Q6P6N5 408 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Olfr523Q8VFE7 317 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Pnrc2Q9CR73 140 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 4931428L18RikQ9D4S9 127 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Trav6n-5A0A075B621 112 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Trav6-5A0A075B6B5 112 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Zfp977L7N2E7 438 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Ca11O70354 328 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Ripply2Q2WG76 128 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 AdipoqQ60994 247 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Klhdc1Q80YG3 406 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Mrpl27Q99N92 148 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Mrpl16Q99N93 251 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Q9D727 114 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Dkk2Q9QYZ8 259 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Rp1P56716 2095 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 Rnf212F6TQD1 307 aa8.21□□□□□ -1.1
Syne1-201ENSMUST00000041639 ApohQ01339 345 aa8.21□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 77 ms