RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm6034E9Q101 117 aa10.95□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr978E9Q985 311 aa10.95□□□□□ -0.66
Nup88-201ENSMUST00000035283 PtafrQ62035 341 aa10.95□□□□□ -0.66
Nup88-201ENSMUST00000035283 EpopQ7TNS8 369 aa10.95□□□□□ -0.66
Nup88-201ENSMUST00000035283 Ankrd55Q8BLD6 626 aa10.95□□□□□ -0.66
Nup88-201ENSMUST00000035283 Q8C3M9 231 aa10.95□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr492Q8VFD1 314 aa10.95□□□□□ -0.66
Nup88-201ENSMUST00000035283 Necap1Q9CR95 275 aa10.95□□□□□ -0.66
Nup88-201ENSMUST00000035283 Nhp2Q9CRB2 153 aaKnown RBP10.95□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr218E9PWV2 313 aa10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Vmn1r119E9Q4H3 307 aa10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Gm4791J3QQ14 102 aa10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr266Q8VFC3 316 aa10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Prr30Q9D9B7 401 aa10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Frem1Q684R7 2191 aa10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Gm27021M0QWE2 156 aa10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Rnase9P60154 184 aa10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Rpl8P62918 257 aaKnown RBP10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Gcm1P70348 436 aa10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Isg15Q64339 161 aaKnown RBP10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Asxl3Q8C4A5 2259 aa10.94□□□□□ -0.66
Nup88-201ENSMUST00000035283 Pcnx1Q9QYC1 2344 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 P03980 138 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Ube2d2bQ6ZWY6 147 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Vmn1r202Q8R259 302 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr1271Q8VG62 305 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Plpp2Q9DAX2 276 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 V1ra8Q9EQ48 279 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr1331K7N684 317 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Igll1P20764 209 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Wnt5bP22726 359 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Bmp5P49003 452 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Ube2l3P68037 154 aaKnown RBP10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 A930003A15RikQ3U552 87 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Trav15-1-dv6-1Q5R1D2 117 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Slc17a2Q5SZA1 478 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr1333Q7TQV7 317 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 4930583I09RikQ9D2E3 102 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Tmub1Q9JMG3 245 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 CadB2RQC6 2225 aa10.93□□□□□ -0.66
Nup88-201ENSMUST00000035283 Trav7n-4A0A075B620 113 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Trbv19A0A0B4J1H4 117 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Trav3n-3A0A0G2JEM0 114 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Tmem92B7ZWI3 162 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 KhkP97328 298 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr148Q60887 310 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Duxbl2Q7TNE6 350 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr965Q7TRA7 312 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Mbnl2Q8C181 373 aaKnown RBP10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Cacna1aP97445 2368 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Fcrl6A1YIY0 268 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 P04940 107 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 P04941 107 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 C5ar1P30993 351 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Rpl19P84099 196 aaKnown RBP10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 KncnQ307W7 124 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Ms4a13Q5FWC3 203 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Cdpf1Q8R3A2 119 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr982Q8VGB3 321 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 ChodlQ9CXM0 273 aa10.92□□□□□ -0.66
Nup88-201ENSMUST00000035283 DscamQ9ERC8 2013 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Dscaml1Q4VA61 2053 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Gm9920D3YVZ2 140 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 1810011H11RikE9PVZ2 95 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Gm21775J3KMK6 180 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Lyz1P17897 148 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 CtsgP28293 261 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Nkx3-1P97436 237 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 CrygcQ61597 174 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr1465Q7TQR2 307 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 CenpmQ9CQA0 180 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Tmem167aQ9CR64 72 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Psmg3Q9CZH3 122 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Vmn1r50Q9EP51 310 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 PigpQ9JHG1 132 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Ros1Q78DX7 2340 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Col6a6Q8C6K9 2265 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Gm6993A0A1W2P738 69 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr1436A0PK57 315 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Gng5Q80SZ7 68 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 COA4Q8BT51 87 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 RnasekQ8K3C0 98 aa10.91□□□□□ -0.66
Nup88-201ENSMUST00000035283 Ighv5-12-4A0A0A6YWG4 117 aa10.9□□□□□ -0.66
Nup88-201ENSMUST00000035283 F2rl2O08675 369 aa10.9□□□□□ -0.66
Nup88-201ENSMUST00000035283 P01630 113 aa10.9□□□□□ -0.66
Nup88-201ENSMUST00000035283 SlpiP97430 131 aa10.9□□□□□ -0.66
Nup88-201ENSMUST00000035283 G430049J08RikQ3TL09 166 aa10.9□□□□□ -0.66
Nup88-201ENSMUST00000035283 Znf146Q8BQN6 292 aa10.9□□□□□ -0.66
Nup88-201ENSMUST00000035283 Gm9944Q8C559 102 aa10.9□□□□□ -0.66
Nup88-201ENSMUST00000035283 Olfr1262Q8VGN2 304 aa10.9□□□□□ -0.66
Nup88-201ENSMUST00000035283 Ppp1r14aQ91VC7 147 aa10.9□□□□□ -0.66
Nup88-201ENSMUST00000035283 Ssbp1Q9CYR0 152 aaKnown RBP10.9□□□□□ -0.66
Nup88-201ENSMUST00000035283 P01792 123 aa10.9□□□□□ -0.67
Nup88-201ENSMUST00000035283 Gng7Q61016 68 aa10.9□□□□□ -0.67
Nup88-201ENSMUST00000035283 Olfr476Q8VGI4 310 aa10.9□□□□□ -0.67
Nup88-201ENSMUST00000035283 Oxld1Q9CR10 201 aa10.9□□□□□ -0.67
Nup88-201ENSMUST00000035283 4933414I15RikQ9D4D5 133 aa10.9□□□□□ -0.67
Nup88-201ENSMUST00000035283 Q9D7E4 109 aa10.9□□□□□ -0.67
Nup88-201ENSMUST00000035283 Ighv1-39A0A075B5V5 117 aa10.89□□□□□ -0.67
Nup88-201ENSMUST00000035283 Zfp109A0A0U1RPC5 652 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms