RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Mbnl2Q8C181 373 aaKnown RBP13.84□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Plxna1P70206 1894 aa13.83□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Gm17334Q8C6U3 126 aa13.83□□□□□ -0.19
Ubfd1-201ENSMUST00000033158 Colca2F8VPY8 239 aa13.83□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Hoxa5P09021 270 aa13.83□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 TbpP29037 316 aa13.83□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 MNCb-2875Q9DCB3 74 aa13.83□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Tmem92B7ZWI3 162 aa13.83□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Gm43517E9PYS1 339 aa13.83□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Plp1P60202 277 aa13.83□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Pate4Q09098 99 aa13.83□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Hs3st6Q5GFD5 342 aa13.83□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Wdr83osQ6ZWX0 106 aa13.83□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Slc35d2Q762D5 326 aa13.83□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 LctF8VPT3 1931 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Nkx2-8O70584 235 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Klf11Q8K1S5 502 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Gpr132Q9Z282 382 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Jmjd1cQ69ZK6 2350 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Ighv1-37A0A0A6YW32 117 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Scgb1b24B1B0N6 92 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Olfr177E9Q7W1 309 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Zfp36P22893 319 aaKnown RBP13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Supt4h1aP63271 117 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Pilrb2Q2YFS1 225 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Gm5148Q8BGG2 154 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Vmn1r54Q9EPB8 315 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Ly6g6dQ9Z1Q3 135 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Ahctf1Q8CJF7 2243 aaKnown RBP13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Gm21983D6RFS9 131 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Tnfsf11O35235 316 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Tnfrsf9P20334 256 aa13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Srsf6Q3TWW8 339 aaKnown RBP13.82□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Ighv5-9A0A075B5Q2 117 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Ighv7-2A0A0A6YX91 119 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Wdr86D3Z757 380 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 PpyP10601 100 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Gm21394Q497R7 227 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Srsf7Q8BL97 267 aaKnown RBP13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 SprnQ8BWU1 147 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Gm16442D3YZG3 307 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Wipf3P0C7L0 485 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Olfr148Q60887 310 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Zfp677Q6PEP4 634 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 4931428L18RikQ9D4S9 127 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Mcm3apQ9WUU9 1971 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Fam168aQ8BGZ2 244 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Prss22Q9ER10 306 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Rp1P56716 2095 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Casp8ap2Q9WUF3 1962 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 P04212 136 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Elovl5Q8BHI7 299 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Muc15Q8C6Z1 331 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Tmem101Q91VP7 257 aa13.81□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Ifitm2Q99J93 144 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Mrpl27Q99N92 148 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Tmem170aQ9D342 144 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Trbv1A0A0B4J1G7 116 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 CirbpP60824 172 aaKnown RBP13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Trdv4Q5R1A3 115 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Slc25a47Q6IS41 310 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Olfr761Q7TRJ0 323 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Q8BG31 207 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Ifitm10Q8BR26 201 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Trav7n-5A0A075B604 112 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 P01655 112 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 MymxQ2Q5T5 84 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Siglec12Q91Y57 467 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Mrpl20Q9CQL4 149 aa13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Cnn3Q9DAW9 330 aaKnown RBP13.8□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Olfr1209Q3SXJ3 310 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Khdc1cQ4KL78 166 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Olfr1178Q7TR20 323 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Col4a5Q63ZW6 1691 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Gvin1Q80SU7 2427 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Trav16A0A075B653 116 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Trbv19A0A0B4J1H4 117 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Zfp983E9PUT0 460 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Csn3P06796 181 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Fgf5P15656 264 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Zic3Q62521 466 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 AgaQ64191 346 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Q91WE4 72 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Tmprss12Q3V0Q7 336 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Gm4792Q569Q2 183 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Znf260Q62513 407 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Trav16nA0A075B634 117 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Sbf1Q6ZPE2 1867 aa13.79□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 ElnP54320 860 aa13.78□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 H2-DMb2Q31099 261 aa13.78□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Q8BTC1 67 aa13.78□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Rpl36-ps4A0A140T8U4 117 aa13.78□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Efnb3O35393 340 aa13.78□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Folr2Q05685 251 aa13.78□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Foxc2Q61850 494 aa13.78□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Il2raP01590 268 aa13.78□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Ascl2O35885 263 aa13.78□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Neurog3P70661 214 aa13.78□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Gm5868Q8BJG1 145 aa13.78□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 EsdQ9R0P3 282 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 73.1 ms