RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 ATP6V0E2Q8NHE4 81 aa10.55□□□□□ -0.72
SNRNP48-203ENST00000634363 GTSF1Q8WW33 167 aa10.55□□□□□ -0.72
SNRNP48-203ENST00000634363 BORCS7Q96B45 105 aa10.55□□□□□ -0.72
SNRNP48-203ENST00000634363 TRAV9-2A0A087WT02 112 aa10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 SMR3BP02814 79 aaPredicted RBP10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 MGPP08493 103 aa10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 NTF3P20783 257 aa10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 TIRAPP58753 221 aa10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 KRTAP10-1P60331 282 aa10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 TWIST1Q15672 202 aa10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 CDPF1Q6NVV7 123 aa10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 NFE4Q86UQ8 179 aa10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 CNFNQ9BYD5 112 aa10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 MSRB1Q9NZV6 116 aa10.54□□□□□ -0.72
SNRNP48-203ENST00000634363 A0A087WTM6 91 aa10.53□□□□□ -0.72
SNRNP48-203ENST00000634363 RPL36AP83881 106 aaKnown RBP10.53□□□□□ -0.72
SNRNP48-203ENST00000634363 OR10G8Q8NGN5 311 aa10.53□□□□□ -0.72
SNRNP48-203ENST00000634363 TSKUQ8WUA8 353 aa10.53□□□□□ -0.72
SNRNP48-203ENST00000634363 RPL36ALQ969Q0 106 aaKnown RBP10.53□□□□□ -0.72
SNRNP48-203ENST00000634363 PGLYRP4Q96LB8 373 aa10.53□□□□□ -0.72
SNRNP48-203ENST00000634363 GFRA4Q9GZZ7 299 aa10.53□□□□□ -0.72
SNRNP48-203ENST00000634363 GTSF1LQ9H1H1 148 aa10.53□□□□□ -0.72
SNRNP48-203ENST00000634363 LINC00694P0DN24 101 aa10.52□□□□□ -0.73
SNRNP48-203ENST00000634363 EVI2AP22794 236 aa10.52□□□□□ -0.73
SNRNP48-203ENST00000634363 SMIM15Q7Z3B0 74 aa10.52□□□□□ -0.73
SNRNP48-203ENST00000634363 DPH3P1Q9H4G8 78 aa10.52□□□□□ -0.73
SNRNP48-203ENST00000634363 KIF25-AS1Q9Y6Z4 181 aa10.52□□□□□ -0.73
SNRNP48-203ENST00000634363 TRAV8-6A0A0B4J262 113 aa10.51□□□□□ -0.73
SNRNP48-203ENST00000634363 FAM231BA6NCW3 169 aa10.51□□□□□ -0.73
SNRNP48-203ENST00000634363 HIGD1CA8MV81 97 aa10.51□□□□□ -0.73
SNRNP48-203ENST00000634363 H7C1H1 209 aa10.51□□□□□ -0.73
SNRNP48-203ENST00000634363 OR10J3Q5JRS4 329 aa10.51□□□□□ -0.73
SNRNP48-203ENST00000634363 WFDC10BQ8IUB3 73 aa10.51□□□□□ -0.73
SNRNP48-203ENST00000634363 Q9UF83 564 aa10.51□□□□□ -0.73
SNRNP48-203ENST00000634363 V9GYV3 84 aa10.51□□□□□ -0.73
SNRNP48-203ENST00000634363 TRBV7-3A0A075B6L6 115 aa10.5□□□□□ -0.73
SNRNP48-203ENST00000634363 FOXA3P55318 350 aaPredicted RBP10.5□□□□□ -0.73
SNRNP48-203ENST00000634363 LELP1Q5T871 98 aa10.5□□□□□ -0.73
SNRNP48-203ENST00000634363 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.5□□□□□ -0.73
SNRNP48-203ENST00000634363 APOBP04114 4563 aaKnown RBP10.5□□□□□ -0.73
SNRNP48-203ENST00000634363 A0A087WWC5 75 aa10.49□□□□□ -0.73
SNRNP48-203ENST00000634363 GCSHP23434 173 aa10.49□□□□□ -0.73
SNRNP48-203ENST00000634363 HAMPP81172 84 aa10.49□□□□□ -0.73
SNRNP48-203ENST00000634363 UQCC3Q6UW78 93 aa10.49□□□□□ -0.73
SNRNP48-203ENST00000634363 NEXN-AS1Q8NBZ9 246 aa10.49□□□□□ -0.73
SNRNP48-203ENST00000634363 A0A1B0GUT8 65 aa10.48□□□□□ -0.73
SNRNP48-203ENST00000634363 UBE2D3P61077 147 aa10.48□□□□□ -0.73
SNRNP48-203ENST00000634363 UBE2D2P62837 147 aa10.48□□□□□ -0.73
SNRNP48-203ENST00000634363 PNRC1Q12796 327 aaPredicted RBP10.48□□□□□ -0.73
SNRNP48-203ENST00000634363 SUMO4Q6EEV6 95 aa10.48□□□□□ -0.73
SNRNP48-203ENST00000634363 NAT8BQ9UHF3 227 aa10.48□□□□□ -0.73
SNRNP48-203ENST00000634363 IGHV3-38A0A0C4DH36 116 aa10.47□□□□□ -0.73
SNRNP48-203ENST00000634363 FAM229AH3BQW9 127 aa10.46□□□□□ -0.73
SNRNP48-203ENST00000634363 K7EP13 123 aa10.46□□□□□ -0.73
SNRNP48-203ENST00000634363 M0QY20 66 aa10.46□□□□□ -0.73
SNRNP48-203ENST00000634363 RIGQ13278 110 aa10.46□□□□□ -0.73
SNRNP48-203ENST00000634363 COMMD7Q86VX2 200 aa10.46□□□□□ -0.73
SNRNP48-203ENST00000634363 NUP35Q8NFH5 326 aa10.46□□□□□ -0.73
SNRNP48-203ENST00000634363 DNAJC30Q96LL9 226 aa10.46□□□□□ -0.73
SNRNP48-203ENST00000634363 DNAH5Q8TE73 4624 aa10.45□□□□□ -0.74
SNRNP48-203ENST00000634363 PPP1R2P9O14990 202 aa10.45□□□□□ -0.74
SNRNP48-203ENST00000634363 PSCAO43653 123 aa10.45□□□□□ -0.74
SNRNP48-203ENST00000634363 RASL11AQ6T310 242 aa10.45□□□□□ -0.74
SNRNP48-203ENST00000634363 C10orf126Q8N4M7 172 aa10.45□□□□□ -0.74
SNRNP48-203ENST00000634363 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
SNRNP48-203ENST00000634363 SMIM27A0A1W2PRY6 76 aa10.44□□□□□ -0.74
SNRNP48-203ENST00000634363 LINC01556Q5JQF7 62 aa10.44□□□□□ -0.74
SNRNP48-203ENST00000634363 DAZ4Q86SG3 579 aaKnown RBP10.44□□□□□ -0.74
SNRNP48-203ENST00000634363 DAZ3Q9NR90 486 aaKnown RBP10.44□□□□□ -0.74
SNRNP48-203ENST00000634363 IGLV5-52A0A0A0MRZ9 124 aa10.43□□□□□ -0.74
SNRNP48-203ENST00000634363 F8W036 122 aa10.43□□□□□ -0.74
SNRNP48-203ENST00000634363 TMEM97Q5BJF2 176 aa10.43□□□□□ -0.74
SNRNP48-203ENST00000634363 NIT2Q9NQR4 276 aa10.43□□□□□ -0.74
SNRNP48-203ENST00000634363 URGCP-MRPS24S4R325 110 aa10.43□□□□□ -0.74
SNRNP48-203ENST00000634363 TRAV26-2A0A0B4J265 109 aa10.42□□□□□ -0.74
SNRNP48-203ENST00000634363 TMEM218A2RU14 115 aa10.42□□□□□ -0.74
SNRNP48-203ENST00000634363 IGHV3-30P01768 117 aa10.42□□□□□ -0.74
SNRNP48-203ENST00000634363 IGHV3-33P01772 117 aa10.42□□□□□ -0.74
SNRNP48-203ENST00000634363 MT-ND4LP03901 98 aa10.42□□□□□ -0.74
SNRNP48-203ENST00000634363 IGHV3-30-3P0DP02 117 aa10.42□□□□□ -0.74
SNRNP48-203ENST00000634363 IGHV3-30-5P0DP03 117 aa10.42□□□□□ -0.74
SNRNP48-203ENST00000634363 TMEM191AQ9H0A3 160 aa10.42□□□□□ -0.74
SNRNP48-203ENST00000634363 TRBV6-8A0A0A6YYG3 113 aa10.41□□□□□ -0.74
SNRNP48-203ENST00000634363 LINC00862A6NCI5 91 aa10.41□□□□□ -0.74
SNRNP48-203ENST00000634363 KCNIP4Q6PIL6 250 aa10.41□□□□□ -0.74
SNRNP48-203ENST00000634363 GATD1Q8NB37 220 aa10.41□□□□□ -0.74
SNRNP48-203ENST00000634363 ANAPC16Q96DE5 110 aa10.41□□□□□ -0.74
SNRNP48-203ENST00000634363 FLG2Q5D862 2391 aaPredicted RBP10.4□□□□□ -0.74
SNRNP48-203ENST00000634363 A0A1B0GW15 77 aa10.4□□□□□ -0.74
SNRNP48-203ENST00000634363 J3QL48 77 aa10.4□□□□□ -0.74
SNRNP48-203ENST00000634363 ADCYAP1P18509 176 aa10.4□□□□□ -0.74
SNRNP48-203ENST00000634363 A0A087WX48 190 aa10.39□□□□□ -0.75
SNRNP48-203ENST00000634363 S100A8P05109 93 aa10.39□□□□□ -0.75
SNRNP48-203ENST00000634363 CAMPP49913 170 aa10.39□□□□□ -0.75
SNRNP48-203ENST00000634363 AMN1Q8IY45 258 aa10.39□□□□□ -0.75
SNRNP48-203ENST00000634363 SEC11CQ9BY50 192 aa10.39□□□□□ -0.75
SNRNP48-203ENST00000634363 Q9HAA7 133 aa10.39□□□□□ -0.75
SNRNP48-203ENST00000634363 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
SNRNP48-203ENST00000634363 LRCOL1A6NCL2 159 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms