RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 Q9UF83 564 aa10.84□□□□□ -0.67
VAPA-204ENST00000577901 A0A087WWC5 75 aa10.83□□□□□ -0.68
VAPA-204ENST00000577901 LINC00694P0DN24 101 aa10.83□□□□□ -0.68
VAPA-204ENST00000577901 XGP55808 180 aa10.83□□□□□ -0.68
VAPA-204ENST00000577901 PEA15Q15121 130 aa10.83□□□□□ -0.68
VAPA-204ENST00000577901 WDR73Q6P4I2 378 aa10.83□□□□□ -0.68
VAPA-204ENST00000577901 LYZL1Q6UWQ5 148 aa10.83□□□□□ -0.68
VAPA-204ENST00000577901 FAM231DQ6ZW35 169 aa10.83□□□□□ -0.68
VAPA-204ENST00000577901 C10orf126Q8N4M7 172 aa10.83□□□□□ -0.68
VAPA-204ENST00000577901 TNFRSF18Q9Y5U5 241 aa10.83□□□□□ -0.68
VAPA-204ENST00000577901 MYCBP2O75592 4640 aa10.82□□□□□ -0.68
VAPA-204ENST00000577901 TRBV7-3A0A075B6L6 115 aa10.82□□□□□ -0.68
VAPA-204ENST00000577901 GATCO43716 136 aaKnown RBP10.82□□□□□ -0.68
VAPA-204ENST00000577901 FAM74A3Q4VXF1 159 aa10.82□□□□□ -0.68
VAPA-204ENST00000577901 NFE4Q86UQ8 179 aa10.82□□□□□ -0.68
VAPA-204ENST00000577901 TRGC1P0CF51 173 aa10.81□□□□□ -0.68
VAPA-204ENST00000577901 NTF3P20783 257 aa10.81□□□□□ -0.68
VAPA-204ENST00000577901 LINC01556Q5JQF7 62 aa10.81□□□□□ -0.68
VAPA-204ENST00000577901 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.81□□□□□ -0.68
VAPA-204ENST00000577901 SMDT1Q9H4I9 107 aa10.81□□□□□ -0.68
VAPA-204ENST00000577901 MSRB1Q9NZV6 116 aa10.81□□□□□ -0.68
VAPA-204ENST00000577901 KIF25-AS1Q9Y6Z4 181 aa10.81□□□□□ -0.68
VAPA-204ENST00000577901 A8MWL6 223 aa10.8□□□□□ -0.68
VAPA-204ENST00000577901 CTRLP40313 264 aa10.8□□□□□ -0.68
VAPA-204ENST00000577901 Q5VSD8 79 aa10.8□□□□□ -0.68
VAPA-204ENST00000577901 LINC01551Q86U37 167 aa10.8□□□□□ -0.68
VAPA-204ENST00000577901 OR10G8Q8NGN5 311 aa10.8□□□□□ -0.68
VAPA-204ENST00000577901 A0A087WTM6 91 aa10.79□□□□□ -0.68
VAPA-204ENST00000577901 MGPP08493 103 aa10.79□□□□□ -0.68
VAPA-204ENST00000577901 LORP23490 312 aaPredicted RBP10.79□□□□□ -0.68
VAPA-204ENST00000577901 KRTAP10-1P60331 282 aa10.79□□□□□ -0.68
VAPA-204ENST00000577901 UBE2D3P61077 147 aa10.79□□□□□ -0.68
VAPA-204ENST00000577901 RAB14P61106 215 aa10.79□□□□□ -0.68
VAPA-204ENST00000577901 UBE2D2P62837 147 aa10.79□□□□□ -0.68
VAPA-204ENST00000577901 TWIST1Q15672 202 aa10.79□□□□□ -0.68
VAPA-204ENST00000577901 TMEM241Q24JQ0 296 aa10.79□□□□□ -0.68
VAPA-204ENST00000577901 FRZBQ92765 325 aa10.79□□□□□ -0.68
VAPA-204ENST00000577901 H7C1H1 209 aa10.78□□□□□ -0.68
VAPA-204ENST00000577901 CT83Q5H943 113 aa10.78□□□□□ -0.68
VAPA-204ENST00000577901 NEXN-AS1Q8NBZ9 246 aa10.78□□□□□ -0.68
VAPA-204ENST00000577901 GTSF1Q8WW33 167 aa10.78□□□□□ -0.68
VAPA-204ENST00000577901 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
VAPA-204ENST00000577901 IGHV3-30P01768 117 aa10.77□□□□□ -0.69
VAPA-204ENST00000577901 IGHV3-33P01772 117 aa10.77□□□□□ -0.69
VAPA-204ENST00000577901 IGHV3-30-3P0DP02 117 aa10.77□□□□□ -0.69
VAPA-204ENST00000577901 IGHV3-30-5P0DP03 117 aa10.77□□□□□ -0.69
VAPA-204ENST00000577901 C15orf54Q8N8G6 183 aa10.77□□□□□ -0.69
VAPA-204ENST00000577901 DPH3P1Q9H4G8 78 aa10.77□□□□□ -0.69
VAPA-204ENST00000577901 OSTCQ9NRP0 149 aa10.77□□□□□ -0.69
VAPA-204ENST00000577901 C9JQL5 133 aa10.76□□□□□ -0.69
VAPA-204ENST00000577901 FOXA3P55318 350 aaPredicted RBP10.76□□□□□ -0.69
VAPA-204ENST00000577901 SRSF3P84103 164 aaKnown RBP10.76□□□□□ -0.69
VAPA-204ENST00000577901 SMIM15Q7Z3B0 74 aa10.76□□□□□ -0.69
VAPA-204ENST00000577901 BORCS7Q96B45 105 aa10.76□□□□□ -0.69
VAPA-204ENST00000577901 DNAJC30Q96LL9 226 aa10.76□□□□□ -0.69
VAPA-204ENST00000577901 NAT8Q9UHE5 227 aa10.76□□□□□ -0.69
VAPA-204ENST00000577901 URGCP-MRPS24S4R325 110 aa10.76□□□□□ -0.69
VAPA-204ENST00000577901 DMBT1Q9UGM3 2413 aaPredicted RBP10.76□□□□□ -0.69
VAPA-204ENST00000577901 IBA57-AS1B1ANH7 110 aa10.75□□□□□ -0.69
VAPA-204ENST00000577901 M0QY20 66 aa10.75□□□□□ -0.69
VAPA-204ENST00000577901 SUMO4Q6EEV6 95 aa10.75□□□□□ -0.69
VAPA-204ENST00000577901 DAZ4Q86SG3 579 aaKnown RBP10.75□□□□□ -0.69
VAPA-204ENST00000577901 TSKUQ8WUA8 353 aa10.75□□□□□ -0.69
VAPA-204ENST00000577901 PGLYRP4Q96LB8 373 aa10.75□□□□□ -0.69
VAPA-204ENST00000577901 GFRA4Q9GZZ7 299 aa10.75□□□□□ -0.69
VAPA-204ENST00000577901 DAZ3Q9NR90 486 aaKnown RBP10.75□□□□□ -0.69
VAPA-204ENST00000577901 RPL23P62829 140 aaKnown RBP10.74□□□□□ -0.69
VAPA-204ENST00000577901 TMEM97Q5BJF2 176 aa10.74□□□□□ -0.69
VAPA-204ENST00000577901 KCNIP4Q6PIL6 250 aa10.74□□□□□ -0.69
VAPA-204ENST00000577901 ISOC2Q96AB3 205 aa10.74□□□□□ -0.69
VAPA-204ENST00000577901 SRRM2Q9UQ35 2752 aaKnown RBP10.73□□□□□ -0.69
VAPA-204ENST00000577901 TRBV6-8A0A0A6YYG3 113 aa10.73□□□□□ -0.69
VAPA-204ENST00000577901 FAM231BA6NCW3 169 aa10.73□□□□□ -0.69
VAPA-204ENST00000577901 SMR3BP02814 79 aaPredicted RBP10.73□□□□□ -0.69
VAPA-204ENST00000577901 GCSHP23434 173 aa10.73□□□□□ -0.69
VAPA-204ENST00000577901 ADIRFQ15847 76 aa10.73□□□□□ -0.69
VAPA-204ENST00000577901 RASL11AQ6T310 242 aa10.73□□□□□ -0.69
VAPA-204ENST00000577901 HIGD1CA8MV81 97 aa10.72□□□□□ -0.69
VAPA-204ENST00000577901 J3QL48 77 aa10.72□□□□□ -0.69
VAPA-204ENST00000577901 LAGE3Q14657 143 aa10.72□□□□□ -0.69
VAPA-204ENST00000577901 A0A087WX48 190 aa10.71□□□□□ -0.69
VAPA-204ENST00000577901 TMEM262E9PQX1 116 aa10.71□□□□□ -0.69
VAPA-204ENST00000577901 PSCAO43653 123 aa10.71□□□□□ -0.69
VAPA-204ENST00000577901 NIT1Q86X76 327 aa10.71□□□□□ -0.69
VAPA-204ENST00000577901 CHCHD7Q9BUK0 85 aa10.71□□□□□ -0.69
VAPA-204ENST00000577901 Q9HAA7 133 aa10.71□□□□□ -0.69
VAPA-204ENST00000577901 NIT2Q9NQR4 276 aa10.71□□□□□ -0.69
VAPA-204ENST00000577901 V9GYV3 84 aa10.71□□□□□ -0.69
VAPA-204ENST00000577901 DNAH8Q96JB1 4490 aa10.7□□□□□ -0.7
VAPA-204ENST00000577901 TRAV8-3A0A0A6YYJ7 113 aa10.7□□□□□ -0.7
VAPA-204ENST00000577901 A0A1B0GUT8 65 aa10.7□□□□□ -0.7
VAPA-204ENST00000577901 FAM229AH3BQW9 127 aa10.7□□□□□ -0.7
VAPA-204ENST00000577901 PKIAP61925 76 aa10.7□□□□□ -0.7
VAPA-204ENST00000577901 ELOBQ15370 118 aa10.7□□□□□ -0.7
VAPA-204ENST00000577901 HAMPP81172 84 aa10.69□□□□□ -0.7
VAPA-204ENST00000577901 Q8N3U1 123 aa10.69□□□□□ -0.7
VAPA-204ENST00000577901 TM2D2Q9BX73 214 aa10.69□□□□□ -0.7
VAPA-204ENST00000577901 TRBV25-1A0A075B6N4 114 aa10.68□□□□□ -0.7
VAPA-204ENST00000577901 CLLU1Q5K131 121 aa10.68□□□□□ -0.7
VAPA-204ENST00000577901 CHCHD5Q9BSY4 110 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms