RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 UBE2DNLQ8IWF7 75 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 ATP6V0E2Q8NHE4 81 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 ERG28Q9UKR5 140 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 HLA-DRB4X5D2U9 266 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 DNHD1Q96M86 4753 aa-0.71□□□□□ -2.52
CDC27-216ENST00000574304 USP9YO00507 2555 aaPredicted RBP-0.71□□□□□ -2.52
CDC27-216ENST00000574304 MYH9P35579 1960 aaKnown RBP-0.72□□□□□ -2.52
CDC27-216ENST00000574304 NIPBLQ6KC79 2804 aaeCLIP-0.72□□□□□ -2.52
CDC27-216ENST00000574304 TRGV1A0A0A0MS02 117 aa-0.72□□□□□ -2.52
CDC27-216ENST00000574304 TMEM14DPA8MWL7 114 aa-0.72□□□□□ -2.52
CDC27-216ENST00000574304 WFDC2Q14508 124 aa-0.72□□□□□ -2.52
CDC27-216ENST00000574304 CYP4F30PQ9H0H9 118 aa-0.72□□□□□ -2.52
CDC27-216ENST00000574304 RIF1Q5UIP0 2472 aaKnown RBP-0.72□□□□□ -2.52
CDC27-216ENST00000574304 PBRM1Q86U86 1689 aa-0.72□□□□□ -2.53
CDC27-216ENST00000574304 DEGS1O15121 323 aa-0.73□□□□□ -2.53
CDC27-216ENST00000574304 SPRR2BP35325 72 aa-0.73□□□□□ -2.53
CDC27-216ENST00000574304 TFAMQ00059 246 aaKnown RBP-0.73□□□□□ -2.53
CDC27-216ENST00000574304 CENPHQ9H3R5 247 aa-0.73□□□□□ -2.53
CDC27-216ENST00000574304 CELSR3Q9NYQ7 3312 aa-0.73□□□□□ -2.53
CDC27-216ENST00000574304 HECTD1Q9ULT8 2610 aa-0.73□□□□□ -2.53
CDC27-216ENST00000574304 PHIPQ8WWQ0 1821 aa-0.73□□□□□ -2.53
CDC27-216ENST00000574304 ITPR3Q14573 2671 aa-0.73□□□□□ -2.53
CDC27-216ENST00000574304 SVEP1Q4LDE5 3571 aa-0.73□□□□□ -2.53
CDC27-216ENST00000574304 PTPRMP28827 1452 aa-0.73□□□□□ -2.53
CDC27-216ENST00000574304 SPTBN1Q01082 2364 aaKnown RBP-0.74□□□□□ -2.53
CDC27-216ENST00000574304 C2CD3Q4AC94 2353 aa-0.74□□□□□ -2.53
CDC27-216ENST00000574304 WDR87Q6ZQQ6 2873 aa-0.74□□□□□ -2.53
CDC27-216ENST00000574304 CHD8Q9HCK8 2581 aa-0.74□□□□□ -2.53
CDC27-216ENST00000574304 TRAV12-3A0A0B4J271 114 aa-0.74□□□□□ -2.53
CDC27-216ENST00000574304 J3QLW9 94 aa-0.74□□□□□ -2.53
CDC27-216ENST00000574304 CMPK1P30085 196 aa-0.74□□□□□ -2.53
CDC27-216ENST00000574304 INSL4Q14641 139 aa-0.74□□□□□ -2.53
CDC27-216ENST00000574304 SPCS2Q15005 226 aa-0.74□□□□□ -2.53
CDC27-216ENST00000574304 CSPG4Q6UVK1 2322 aa-0.74□□□□□ -2.53
CDC27-216ENST00000574304 CNOT1A5YKK6 2376 aaKnown RBP-0.74□□□□□ -2.53
CDC27-216ENST00000574304 FLGP20930 4061 aaPredicted RBP-0.74□□□□□ -2.53
CDC27-216ENST00000574304 MYO18BQ8IUG5 2567 aa-0.74□□□□□ -2.53
CDC27-216ENST00000574304 RPS28P62857 69 aaKnown RBP-0.75□□□□□ -2.53
CDC27-216ENST00000574304 SPAG11BQ08648 103 aa-0.75□□□□□ -2.53
CDC27-216ENST00000574304 ATP11AUNQ6ZP68 121 aa-0.75□□□□□ -2.53
CDC27-216ENST00000574304 SKA2Q8WVK7 121 aaPredicted RBP-0.75□□□□□ -2.53
CDC27-216ENST00000574304 SPTA1P02549 2419 aa-0.75□□□□□ -2.53
CDC27-216ENST00000574304 PKHD1P08F94 4074 aa-0.75□□□□□ -2.53
CDC27-216ENST00000574304 LAMB1P07942 1786 aa-0.75□□□□□ -2.53
CDC27-216ENST00000574304 ATRQ13535 2644 aa-0.76□□□□□ -2.53
CDC27-216ENST00000574304 TRAV36DV7A0A075B6V5 113 aa-0.76□□□□□ -2.53
CDC27-216ENST00000574304 A0A0D9SFI3 127 aa-0.76□□□□□ -2.53
CDC27-216ENST00000574304 TNFSF15O95150 251 aa-0.76□□□□□ -2.53
CDC27-216ENST00000574304 CNFNQ9BYD5 112 aa-0.76□□□□□ -2.53
CDC27-216ENST00000574304 BATF3Q9NR55 127 aa-0.76□□□□□ -2.53
CDC27-216ENST00000574304 SCP2D1Q9UJQ7 156 aa-0.76□□□□□ -2.53
CDC27-216ENST00000574304 LSM2Q9Y333 95 aaKnown RBP-0.76□□□□□ -2.53
CDC27-216ENST00000574304 KIAA0100Q14667 2235 aaKnown RBP-0.76□□□□□ -2.53
CDC27-216ENST00000574304 GVINP1Q7Z2Y8 2422 aa-0.76□□□□□ -2.53
CDC27-216ENST00000574304 MXRA5Q9NR99 2828 aa-0.76□□□□□ -2.53
CDC27-216ENST00000574304 ARFGEF1Q9Y6D6 1849 aa-0.77□□□□□ -2.53
CDC27-216ENST00000574304 PPRC1Q5VV67 1664 aaKnown RBP-0.77□□□□□ -2.53
CDC27-216ENST00000574304 GOLGA3Q08378 1498 aa-0.77□□□□□ -2.53
CDC27-216ENST00000574304 TRAV22A0A0B4J277 110 aa-0.77□□□□□ -2.53
CDC27-216ENST00000574304 CCDC179H3BU77 68 aa-0.77□□□□□ -2.53
CDC27-216ENST00000574304 YPEL1O60688 119 aa-0.77□□□□□ -2.53
CDC27-216ENST00000574304 TCTE3Q8IZS6 198 aa-0.77□□□□□ -2.53
CDC27-216ENST00000574304 PARP14Q460N5 1801 aa-0.78□□□□□ -2.53
CDC27-216ENST00000574304 NRXN2Q9P2S2 1712 aa-0.78□□□□□ -2.53
CDC27-216ENST00000574304 UHRF1BP1LA0JNW5 1464 aa-0.78□□□□□ -2.53
CDC27-216ENST00000574304 TSTD3H0UI37 97 aa-0.78□□□□□ -2.53
CDC27-216ENST00000574304 HIGD1AQ9Y241 93 aa-0.78□□□□□ -2.53
CDC27-216ENST00000574304 SPINK8P0C7L1 97 aa-0.79□□□□□ -2.54
CDC27-216ENST00000574304 Q5VSD8 79 aa-0.79□□□□□ -2.54
CDC27-216ENST00000574304 SMIM15Q7Z3B0 74 aa-0.79□□□□□ -2.54
CDC27-216ENST00000574304 MAGOHBQ96A72 148 aaKnown RBP-0.79□□□□□ -2.54
CDC27-216ENST00000574304 DDA1Q9BW61 102 aa-0.79□□□□□ -2.54
CDC27-216ENST00000574304 ARAP1Q96P48 1450 aa-0.8□□□□□ -2.54
CDC27-216ENST00000574304 M0R2P5 195 aa-0.8□□□□□ -2.54
CDC27-216ENST00000574304 Q8IZM0 81 aa-0.8□□□□□ -2.54
CDC27-216ENST00000574304 NDUFA12Q9UI09 145 aa-0.8□□□□□ -2.54
CDC27-216ENST00000574304 GINS2Q9Y248 185 aa-0.8□□□□□ -2.54
CDC27-216ENST00000574304 MYH13Q9UKX3 1938 aa-0.81□□□□□ -2.54
CDC27-216ENST00000574304 A0A1B0GX51 115 aa-0.81□□□□□ -2.54
CDC27-216ENST00000574304 G3V318 75 aa-0.81□□□□□ -2.54
CDC27-216ENST00000574304 SCTP09683 121 aa-0.81□□□□□ -2.54
CDC27-216ENST00000574304 EDDM3BP56851 147 aa-0.81□□□□□ -2.54
CDC27-216ENST00000574304 LINC01545Q5VT33 79 aa-0.81□□□□□ -2.54
CDC27-216ENST00000574304 HSPB11Q9Y547 144 aa-0.81□□□□□ -2.54
CDC27-216ENST00000574304 ERCC6Q03468 1493 aa-0.81□□□□□ -2.54
CDC27-216ENST00000574304 URB1O60287 2271 aaKnown RBP-0.81□□□□□ -2.54
CDC27-216ENST00000574304 FASNP49327 2511 aaKnown RBP-0.81□□□□□ -2.54
CDC27-216ENST00000574304 TRAV1-2A0A0B4J238 106 aa-0.82□□□□□ -2.54
CDC27-216ENST00000574304 TRBV10-3A0A0K0K1G6 114 aa-0.82□□□□□ -2.54
CDC27-216ENST00000574304 RBM3P98179 157 aaKnown RBP-0.82□□□□□ -2.54
CDC27-216ENST00000574304 NBPF19A0A087WUL8 3843 aa-0.83□□□□□ -2.54
CDC27-216ENST00000574304 MGAM2Q2M2H8 2515 aa-0.83□□□□□ -2.54
CDC27-216ENST00000574304 PRKDCP78527 4128 aaKnown RBP-0.83□□□□□ -2.54
CDC27-216ENST00000574304 SPRR1AP35321 89 aa-0.83□□□□□ -2.54
CDC27-216ENST00000574304 KRTAP6-2Q3LI66 62 aa-0.83□□□□□ -2.54
CDC27-216ENST00000574304 MUC22E2RYF6 1773 aaPredicted RBP-0.83□□□□□ -2.54
CDC27-216ENST00000574304 PLCE1Q9P212 2302 aa-0.83□□□□□ -2.54
CDC27-216ENST00000574304 DNAH6Q9C0G6 4158 aa-0.84□□□□□ -2.54
CDC27-216ENST00000574304 PRRC2CQ9Y520 2896 aaKnown RBP-0.84□□□□□ -2.54
CDC27-216ENST00000574304 SYNJ1O43426 1573 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms