RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 NTF3P20783 257 aa9.82□□□□□ -0.84
LITAF-208ENST00000571627 SRSF3P84103 164 aaKnown RBP9.82□□□□□ -0.84
LITAF-208ENST00000571627 LINC01556Q5JQF7 62 aa9.82□□□□□ -0.84
LITAF-208ENST00000571627 Q8N3U1 123 aa9.82□□□□□ -0.84
LITAF-208ENST00000571627 C10orf126Q8N4M7 172 aa9.82□□□□□ -0.84
LITAF-208ENST00000571627 C15orf54Q8N8G6 183 aa9.82□□□□□ -0.84
LITAF-208ENST00000571627 OR10G8Q8NGN5 311 aa9.82□□□□□ -0.84
LITAF-208ENST00000571627 NAT8Q9UHE5 227 aa9.82□□□□□ -0.84
LITAF-208ENST00000571627 DNAH5Q8TE73 4624 aa9.81□□□□□ -0.84
LITAF-208ENST00000571627 FUSP35637 526 aaKnown RBP eCLIP9.81□□□□□ -0.84
LITAF-208ENST00000571627 FOXA3P55318 350 aaPredicted RBP9.81□□□□□ -0.84
LITAF-208ENST00000571627 TWIST1Q15672 202 aa9.81□□□□□ -0.84
LITAF-208ENST00000571627 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
LITAF-208ENST00000571627 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.81□□□□□ -0.84
LITAF-208ENST00000571627 GTSF1Q8WW33 167 aa9.81□□□□□ -0.84
LITAF-208ENST00000571627 FAM231BA6NCW3 169 aa9.8□□□□□ -0.84
LITAF-208ENST00000571627 H7C1H1 209 aa9.8□□□□□ -0.84
LITAF-208ENST00000571627 MGPP08493 103 aa9.8□□□□□ -0.84
LITAF-208ENST00000571627 UBE2D3P61077 147 aa9.8□□□□□ -0.84
LITAF-208ENST00000571627 RPL23P62829 140 aaKnown RBP9.8□□□□□ -0.84
LITAF-208ENST00000571627 UBE2D2P62837 147 aa9.8□□□□□ -0.84
LITAF-208ENST00000571627 SMIM15Q7Z3B0 74 aa9.8□□□□□ -0.84
LITAF-208ENST00000571627 NEXN-AS1Q8NBZ9 246 aa9.8□□□□□ -0.84
LITAF-208ENST00000571627 TSKUQ8WUA8 353 aa9.8□□□□□ -0.84
LITAF-208ENST00000571627 GFRA4Q9GZZ7 299 aa9.8□□□□□ -0.84
LITAF-208ENST00000571627 DPH3P1Q9H4G8 78 aa9.8□□□□□ -0.84
LITAF-208ENST00000571627 HSPG2P98160 4391 aa9.79□□□□□ -0.84
LITAF-208ENST00000571627 PCLOQ9Y6V0 5065 aa9.79□□□□□ -0.84
LITAF-208ENST00000571627 ADIRFQ15847 76 aa9.79□□□□□ -0.84
LITAF-208ENST00000571627 CLLU1Q5K131 121 aa9.79□□□□□ -0.84
LITAF-208ENST00000571627 ISOC2Q96AB3 205 aa9.79□□□□□ -0.84
LITAF-208ENST00000571627 BORCS7Q96B45 105 aa9.79□□□□□ -0.84
LITAF-208ENST00000571627 Q9HAA7 133 aa9.79□□□□□ -0.84
LITAF-208ENST00000571627 PGLYRP4Q96LB8 373 aa9.78□□□□□ -0.84
LITAF-208ENST00000571627 DNAJC30Q96LL9 226 aa9.78□□□□□ -0.84
LITAF-208ENST00000571627 APOBP04114 4563 aaKnown RBP9.77□□□□□ -0.85
LITAF-208ENST00000571627 A0A087WTM6 91 aa9.77□□□□□ -0.85
LITAF-208ENST00000571627 IBA57-AS1B1ANH7 110 aa9.77□□□□□ -0.85
LITAF-208ENST00000571627 M0QY20 66 aa9.77□□□□□ -0.85
LITAF-208ENST00000571627 SUMO4Q6EEV6 95 aa9.77□□□□□ -0.85
LITAF-208ENST00000571627 DAZ4Q86SG3 579 aaKnown RBP9.77□□□□□ -0.85
LITAF-208ENST00000571627 DAZ3Q9NR90 486 aaKnown RBP9.77□□□□□ -0.85
LITAF-208ENST00000571627 V9GYV3 84 aa9.77□□□□□ -0.85
LITAF-208ENST00000571627 HIGD1CA8MV81 97 aa9.76□□□□□ -0.85
LITAF-208ENST00000571627 EREGO14944 169 aa9.76□□□□□ -0.85
LITAF-208ENST00000571627 TMEM97Q5BJF2 176 aa9.76□□□□□ -0.85
LITAF-208ENST00000571627 RASL11AQ6T310 242 aa9.76□□□□□ -0.85
LITAF-208ENST00000571627 A0A1B0GUT8 65 aa9.75□□□□□ -0.85
LITAF-208ENST00000571627 TRBV6-8A0A0A6YYG3 113 aa9.74□□□□□ -0.85
LITAF-208ENST00000571627 PSCAO43653 123 aa9.74□□□□□ -0.85
LITAF-208ENST00000571627 IFITM2Q01629 132 aa9.74□□□□□ -0.85
LITAF-208ENST00000571627 KCNIP4Q6PIL6 250 aa9.74□□□□□ -0.85
LITAF-208ENST00000571627 FRZBQ92765 325 aa9.74□□□□□ -0.85
LITAF-208ENST00000571627 NIT2Q9NQR4 276 aa9.74□□□□□ -0.85
LITAF-208ENST00000571627 NAT8BQ9UHF3 227 aa9.74□□□□□ -0.85
LITAF-208ENST00000571627 URGCP-MRPS24S4R325 110 aa9.74□□□□□ -0.85
LITAF-208ENST00000571627 CDK2AP2O75956 126 aa9.73□□□□□ -0.85
LITAF-208ENST00000571627 LAGE3Q14657 143 aa9.73□□□□□ -0.85
LITAF-208ENST00000571627 CHCHD7Q9BUK0 85 aa9.73□□□□□ -0.85
LITAF-208ENST00000571627 KRTAP17-1Q9BYP8 105 aa9.73□□□□□ -0.85
LITAF-208ENST00000571627 PKIAP61925 76 aa9.72□□□□□ -0.85
LITAF-208ENST00000571627 RIGQ13278 110 aa9.72□□□□□ -0.85
LITAF-208ENST00000571627 NIT1Q86X76 327 aa9.72□□□□□ -0.85
LITAF-208ENST00000571627 NUP35Q8NFH5 326 aa9.72□□□□□ -0.85
LITAF-208ENST00000571627 A0A087WX48 190 aa9.71□□□□□ -0.86
LITAF-208ENST00000571627 SMIM27A0A1W2PRY6 76 aa9.71□□□□□ -0.86
LITAF-208ENST00000571627 PNRC1Q12796 327 aaPredicted RBP9.71□□□□□ -0.86
LITAF-208ENST00000571627 ELOBQ15370 118 aa9.71□□□□□ -0.86
LITAF-208ENST00000571627 UQCC3Q6UW78 93 aa9.71□□□□□ -0.86
LITAF-208ENST00000571627 GATD1Q8NB37 220 aa9.71□□□□□ -0.86
LITAF-208ENST00000571627 TMEM191AQ9H0A3 160 aa9.71□□□□□ -0.86
LITAF-208ENST00000571627 PGPEP1Q9NXJ5 209 aa9.71□□□□□ -0.86
LITAF-208ENST00000571627 ABCA13Q86UQ4 5058 aa9.71□□□□□ -0.86
LITAF-208ENST00000571627 LRCOL1A6NCL2 159 aa9.7□□□□□ -0.86
LITAF-208ENST00000571627 PPP1R2P9O14990 202 aa9.7□□□□□ -0.86
LITAF-208ENST00000571627 TRBV25-1A0A075B6N4 114 aa9.69□□□□□ -0.86
LITAF-208ENST00000571627 TRAV8-3A0A0A6YYJ7 113 aa9.69□□□□□ -0.86
LITAF-208ENST00000571627 A0A1B0GW15 77 aa9.69□□□□□ -0.86
LITAF-208ENST00000571627 TMEM262E9PQX1 116 aa9.69□□□□□ -0.86
LITAF-208ENST00000571627 CDPF1Q6NVV7 123 aa9.69□□□□□ -0.86
LITAF-208ENST00000571627 CHCHD5Q9BSY4 110 aa9.69□□□□□ -0.86
LITAF-208ENST00000571627 KRTAP4-5Q9BYR2 181 aa9.69□□□□□ -0.86
LITAF-208ENST00000571627 KLK12Q9UKR0 248 aa9.69□□□□□ -0.86
LITAF-208ENST00000571627 TRAV26-2A0A0B4J265 109 aa9.68□□□□□ -0.86
LITAF-208ENST00000571627 IGHV1-24A0A0C4DH33 117 aa9.68□□□□□ -0.86
LITAF-208ENST00000571627 IQCJQ1A5X6 159 aa9.68□□□□□ -0.86
LITAF-208ENST00000571627 NTM-AS1Q6ZSK4 140 aa9.68□□□□□ -0.86
LITAF-208ENST00000571627 MAPKAPK5-AS1Q8N8E1 139 aa9.68□□□□□ -0.86
LITAF-208ENST00000571627 TM2D2Q9BX73 214 aa9.68□□□□□ -0.86
LITAF-208ENST00000571627 KRTAP10-1P60331 282 aa9.67□□□□□ -0.86
LITAF-208ENST00000571627 COTL1Q14019 142 aa9.67□□□□□ -0.86
LITAF-208ENST00000571627 WFDC2Q14508 124 aa9.67□□□□□ -0.86
LITAF-208ENST00000571627 MRAP2Q96G30 205 aa9.67□□□□□ -0.86
LITAF-208ENST00000571627 LECT2O14960 151 aa9.66□□□□□ -0.86
LITAF-208ENST00000571627 MT-ND4LP03901 98 aa9.66□□□□□ -0.86
LITAF-208ENST00000571627 S100A8P05109 93 aa9.66□□□□□ -0.86
LITAF-208ENST00000571627 RAB4AP20338 218 aa9.66□□□□□ -0.86
LITAF-208ENST00000571627 MPV17L2Q567V2 206 aa9.66□□□□□ -0.86
LITAF-208ENST00000571627 Q8N814 137 aa9.66□□□□□ -0.86
LITAF-208ENST00000571627 ANAPC16Q96DE5 110 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms