RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ISOC2Q96AB3 205 aa10.29□□□□□ -0.76
SNRPA1-213ENST00000560856 IBA57-AS1B1ANH7 110 aa10.28□□□□□ -0.76
SNRPA1-213ENST00000560856 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
SNRPA1-213ENST00000560856 C10orf126Q8N4M7 172 aa10.28□□□□□ -0.76
SNRPA1-213ENST00000560856 V9GYV3 84 aa10.28□□□□□ -0.76
SNRPA1-213ENST00000560856 IGHV3-30P01768 117 aa10.27□□□□□ -0.77
SNRPA1-213ENST00000560856 IGHV3-33P01772 117 aa10.27□□□□□ -0.77
SNRPA1-213ENST00000560856 MGPP08493 103 aa10.27□□□□□ -0.77
SNRPA1-213ENST00000560856 IGHV3-30-3P0DP02 117 aa10.27□□□□□ -0.77
SNRPA1-213ENST00000560856 IGHV3-30-5P0DP03 117 aa10.27□□□□□ -0.77
SNRPA1-213ENST00000560856 IFITM2Q01629 132 aa10.27□□□□□ -0.77
SNRPA1-213ENST00000560856 TWIST1Q15672 202 aa10.27□□□□□ -0.77
SNRPA1-213ENST00000560856 TSKUQ8WUA8 353 aa10.27□□□□□ -0.77
SNRPA1-213ENST00000560856 PGLYRP4Q96LB8 373 aa10.27□□□□□ -0.77
SNRPA1-213ENST00000560856 DPH3P1Q9H4G8 78 aa10.27□□□□□ -0.77
SNRPA1-213ENST00000560856 NAT8Q9UHE5 227 aa10.27□□□□□ -0.77
SNRPA1-213ENST00000560856 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
SNRPA1-213ENST00000560856 NFE4Q86UQ8 179 aa10.26□□□□□ -0.77
SNRPA1-213ENST00000560856 FAM231BA6NCW3 169 aa10.25□□□□□ -0.77
SNRPA1-213ENST00000560856 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
SNRPA1-213ENST00000560856 NIT1Q86X76 327 aa10.25□□□□□ -0.77
SNRPA1-213ENST00000560856 DNAJC30Q96LL9 226 aa10.25□□□□□ -0.77
SNRPA1-213ENST00000560856 GFRA4Q9GZZ7 299 aa10.25□□□□□ -0.77
SNRPA1-213ENST00000560856 DNAH5Q8TE73 4624 aa10.25□□□□□ -0.77
SNRPA1-213ENST00000560856 KIAA1109Q2LD37 5005 aa10.24□□□□□ -0.77
SNRPA1-213ENST00000560856 TRBV6-8A0A0A6YYG3 113 aa10.24□□□□□ -0.77
SNRPA1-213ENST00000560856 HIGD1CA8MV81 97 aa10.24□□□□□ -0.77
SNRPA1-213ENST00000560856 ADIRFQ15847 76 aa10.24□□□□□ -0.77
SNRPA1-213ENST00000560856 CLLU1Q5K131 121 aa10.24□□□□□ -0.77
SNRPA1-213ENST00000560856 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
SNRPA1-213ENST00000560856 DAZ4Q86SG3 579 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-213ENST00000560856 DAZ3Q9NR90 486 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-213ENST00000560856 H7C1H1 209 aa10.23□□□□□ -0.77
SNRPA1-213ENST00000560856 C15orf54Q8N8G6 183 aa10.23□□□□□ -0.77
SNRPA1-213ENST00000560856 GATD1Q8NB37 220 aa10.23□□□□□ -0.77
SNRPA1-213ENST00000560856 A0A1B0GUT8 65 aa10.22□□□□□ -0.77
SNRPA1-213ENST00000560856 KRTAP10-2P60368 255 aa10.22□□□□□ -0.77
SNRPA1-213ENST00000560856 RAB14P61106 215 aa10.22□□□□□ -0.77
SNRPA1-213ENST00000560856 LAGE3Q14657 143 aa10.22□□□□□ -0.77
SNRPA1-213ENST00000560856 NUP35Q8NFH5 326 aa10.22□□□□□ -0.77
SNRPA1-213ENST00000560856 NIT2Q9NQR4 276 aa10.22□□□□□ -0.77
SNRPA1-213ENST00000560856 HERC2O95714 4834 aa10.22□□□□□ -0.77
SNRPA1-213ENST00000560856 A0A087WTM6 91 aa10.2□□□□□ -0.78
SNRPA1-213ENST00000560856 TRAV26-2A0A0B4J265 109 aa10.2□□□□□ -0.78
SNRPA1-213ENST00000560856 SPATA12Q7Z6I5 190 aa10.2□□□□□ -0.78
SNRPA1-213ENST00000560856 CHCHD7Q9BUK0 85 aa10.2□□□□□ -0.78
SNRPA1-213ENST00000560856 SMIM27A0A1W2PRY6 76 aa10.19□□□□□ -0.78
SNRPA1-213ENST00000560856 IQCJQ1A5X6 159 aa10.19□□□□□ -0.78
SNRPA1-213ENST00000560856 TMEM97Q5BJF2 176 aa10.19□□□□□ -0.78
SNRPA1-213ENST00000560856 SMIM15Q7Z3B0 74 aa10.19□□□□□ -0.78
SNRPA1-213ENST00000560856 FRZBQ92765 325 aa10.19□□□□□ -0.78
SNRPA1-213ENST00000560856 RNF185Q96GF1 192 aa10.19□□□□□ -0.78
SNRPA1-213ENST00000560856 TMEM191AQ9H0A3 160 aa10.19□□□□□ -0.78
SNRPA1-213ENST00000560856 Q9HAA7 133 aa10.19□□□□□ -0.78
SNRPA1-213ENST00000560856 LRCOL1A6NCL2 159 aa10.18□□□□□ -0.78
SNRPA1-213ENST00000560856 GAS8-AS1O95177 125 aa10.18□□□□□ -0.78
SNRPA1-213ENST00000560856 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.18□□□□□ -0.78
SNRPA1-213ENST00000560856 RPL39LQ96EH5 51 aaKnown RBP10.18□□□□□ -0.78
SNRPA1-213ENST00000560856 A0A087WX48 190 aa10.17□□□□□ -0.78
SNRPA1-213ENST00000560856 TRAV8-3A0A0A6YYJ7 113 aa10.17□□□□□ -0.78
SNRPA1-213ENST00000560856 MPV17L2Q567V2 206 aa10.17□□□□□ -0.78
SNRPA1-213ENST00000560856 BORCS7Q96B45 105 aa10.17□□□□□ -0.78
SNRPA1-213ENST00000560856 NAT8BQ9UHF3 227 aa10.17□□□□□ -0.78
SNRPA1-213ENST00000560856 KLK12Q9UKR0 248 aa10.17□□□□□ -0.78
SNRPA1-213ENST00000560856 C16orf90A8MZG2 172 aa10.16□□□□□ -0.78
SNRPA1-213ENST00000560856 RAB4AP20338 218 aa10.16□□□□□ -0.78
SNRPA1-213ENST00000560856 RIGQ13278 110 aa10.16□□□□□ -0.78
SNRPA1-213ENST00000560856 ATRAIDQ6UW56 229 aa10.16□□□□□ -0.78
SNRPA1-213ENST00000560856 MAPKAPK5-AS1Q8N8E1 139 aa10.16□□□□□ -0.78
SNRPA1-213ENST00000560856 CHCHD5Q9BSY4 110 aa10.16□□□□□ -0.78
SNRPA1-213ENST00000560856 URGCP-MRPS24S4R325 110 aa10.16□□□□□ -0.78
SNRPA1-213ENST00000560856 RYR1P21817 5038 aa10.16□□□□□ -0.78
SNRPA1-213ENST00000560856 TRBV25-1A0A075B6N4 114 aa10.15□□□□□ -0.78
SNRPA1-213ENST00000560856 IGHV1-24A0A0C4DH33 117 aa10.15□□□□□ -0.78
SNRPA1-213ENST00000560856 TRBV6-5A0A0K0K1A5 114 aa10.15□□□□□ -0.78
SNRPA1-213ENST00000560856 TMEM262E9PQX1 116 aa10.15□□□□□ -0.78
SNRPA1-213ENST00000560856 AMN1Q8IY45 258 aa10.15□□□□□ -0.78
SNRPA1-213ENST00000560856 DEFB104AQ8WTQ1 72 aa10.15□□□□□ -0.78
SNRPA1-213ENST00000560856 APOBP04114 4563 aaKnown RBP10.15□□□□□ -0.78
SNRPA1-213ENST00000560856 FUSP35637 526 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNRPA1-213ENST00000560856 RBX1P62877 108 aa10.14□□□□□ -0.79
SNRPA1-213ENST00000560856 GAGE6Q13070 117 aa10.14□□□□□ -0.79
SNRPA1-213ENST00000560856 ELOBQ15370 118 aa10.14□□□□□ -0.79
SNRPA1-213ENST00000560856 KCNIP4Q6PIL6 250 aa10.14□□□□□ -0.79
SNRPA1-213ENST00000560856 ENHOQ6UWT2 76 aa10.14□□□□□ -0.79
SNRPA1-213ENST00000560856 Q8N976 141 aa10.14□□□□□ -0.79
SNRPA1-213ENST00000560856 TM2D2Q9BX73 214 aa10.14□□□□□ -0.79
SNRPA1-213ENST00000560856 HSPG2P98160 4391 aa10.14□□□□□ -0.79
SNRPA1-213ENST00000560856 RPS10P46783 165 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-213ENST00000560856 PKIAP61925 76 aa10.13□□□□□ -0.79
SNRPA1-213ENST00000560856 WFDC2Q14508 124 aa10.13□□□□□ -0.79
SNRPA1-213ENST00000560856 UBE2WQ96B02 151 aa10.13□□□□□ -0.79
SNRPA1-213ENST00000560856 PGPEP1Q9NXJ5 209 aa10.13□□□□□ -0.79
SNRPA1-213ENST00000560856 A0A1B0GXF2 115 aa10.12□□□□□ -0.79
SNRPA1-213ENST00000560856 SDHAF1A6NFY7 115 aa10.12□□□□□ -0.79
SNRPA1-213ENST00000560856 EREGO14944 169 aa10.12□□□□□ -0.79
SNRPA1-213ENST00000560856 PSCAO43653 123 aa10.12□□□□□ -0.79
SNRPA1-213ENST00000560856 PNRC1Q12796 327 aaPredicted RBP10.12□□□□□ -0.79
SNRPA1-213ENST00000560856 COTL1Q14019 142 aa10.12□□□□□ -0.79
SNRPA1-213ENST00000560856 MRAP2Q96G30 205 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms