RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 PRM2P04554 102 aa11.12□□□□□ -0.63
CDC42BPB-203ENST00000558867 INAFM2P0DMQ5 153 aa11.12□□□□□ -0.63
CDC42BPB-203ENST00000558867 HTN1P15515 57 aa11.12□□□□□ -0.63
CDC42BPB-203ENST00000558867 LINC00310P59036 64 aa11.12□□□□□ -0.63
CDC42BPB-203ENST00000558867 TWIST1Q15672 202 aa11.12□□□□□ -0.63
CDC42BPB-203ENST00000558867 HIST1H2BLQ99880 126 aa11.12□□□□□ -0.63
CDC42BPB-203ENST00000558867 J3KRW8 73 aa11.11□□□□□ -0.63
CDC42BPB-203ENST00000558867 PPBPP02775 128 aa11.11□□□□□ -0.63
CDC42BPB-203ENST00000558867 RNASE3P12724 160 aaKnown RBP11.11□□□□□ -0.63
CDC42BPB-203ENST00000558867 AZU1P20160 251 aa11.11□□□□□ -0.63
CDC42BPB-203ENST00000558867 BAGE3Q86Y29 109 aa11.11□□□□□ -0.63
CDC42BPB-203ENST00000558867 TMEM18Q96B42 140 aa11.11□□□□□ -0.63
CDC42BPB-203ENST00000558867 UPK3BQ9BT76 320 aa11.11□□□□□ -0.63
CDC42BPB-203ENST00000558867 PGPEP1Q9NXJ5 209 aa11.11□□□□□ -0.63
CDC42BPB-203ENST00000558867 TRAV12-2A0A075B6T6 113 aa11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 IGHV1OR15-1A0A075B7D0 117 aa11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 PLAC8L1A1L4L8 177 aa11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 H3BVH4 76 aa11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 SMIM6P0DI80 62 aa11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 S100A4P26447 101 aaKnown RBP11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 AKR1D1P51857 326 aa11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 KRTAP10-2P60368 255 aa11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 OR10AG1Q8NH19 301 aa11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 NAGKQ9UJ70 344 aa11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
CDC42BPB-203ENST00000558867 TRAV26-1A0A087WT03 109 aa11.09□□□□□ -0.63
CDC42BPB-203ENST00000558867 SERF1AO75920 110 aa11.09□□□□□ -0.63
CDC42BPB-203ENST00000558867 SPANXN1Q5VSR9 72 aa11.09□□□□□ -0.63
CDC42BPB-203ENST00000558867 SMIM15Q7Z3B0 74 aa11.09□□□□□ -0.63
CDC42BPB-203ENST00000558867 TMEM263Q8WUH6 116 aaKnown RBP11.09□□□□□ -0.63
CDC42BPB-203ENST00000558867 C9orf85Q96MD7 179 aa11.09□□□□□ -0.63
CDC42BPB-203ENST00000558867 NOP10Q9NPE3 64 aaKnown RBP11.09□□□□□ -0.63
CDC42BPB-203ENST00000558867 TRGV11A0A075B6L2 103 aa11.08□□□□□ -0.64
CDC42BPB-203ENST00000558867 H3BNG1 76 aa11.08□□□□□ -0.64
CDC42BPB-203ENST00000558867 RAB4AP20338 218 aa11.08□□□□□ -0.64
CDC42BPB-203ENST00000558867 MRPL51Q4U2R6 128 aaKnown RBP11.08□□□□□ -0.64
CDC42BPB-203ENST00000558867 MUC21Q5SSG8 566 aa11.08□□□□□ -0.64
CDC42BPB-203ENST00000558867 ORMDL3Q8N138 153 aa11.08□□□□□ -0.64
CDC42BPB-203ENST00000558867 CHCHD1Q96BP2 118 aaKnown RBP11.08□□□□□ -0.64
CDC42BPB-203ENST00000558867 RNF185Q96GF1 192 aa11.08□□□□□ -0.64
CDC42BPB-203ENST00000558867 MSRB1Q9NZV6 116 aa11.08□□□□□ -0.64
CDC42BPB-203ENST00000558867 MRPS16Q9Y3D3 137 aaKnown RBP11.08□□□□□ -0.64
CDC42BPB-203ENST00000558867 IGHV3-16A0A0C4DH30 117 aa11.07□□□□□ -0.64
CDC42BPB-203ENST00000558867 GNRH2O43555 120 aa11.07□□□□□ -0.64
CDC42BPB-203ENST00000558867 FABP4P15090 132 aa11.07□□□□□ -0.64
CDC42BPB-203ENST00000558867 AMN1Q8IY45 258 aa11.07□□□□□ -0.64
CDC42BPB-203ENST00000558867 LINC00518Q8N0U6 118 aa11.07□□□□□ -0.64
CDC42BPB-203ENST00000558867 PHLDA3Q9Y5J5 127 aa11.07□□□□□ -0.64
CDC42BPB-203ENST00000558867 NUPR1O60356 82 aa11.06□□□□□ -0.64
CDC42BPB-203ENST00000558867 PDZD11Q5EBL8 140 aa11.06□□□□□ -0.64
CDC42BPB-203ENST00000558867 PIK3CD-AS1Q5SR53 167 aa11.06□□□□□ -0.64
CDC42BPB-203ENST00000558867 CDPF1Q6NVV7 123 aa11.06□□□□□ -0.64
CDC42BPB-203ENST00000558867 PTH2Q96A98 100 aa11.06□□□□□ -0.64
CDC42BPB-203ENST00000558867 KRTAP1-5Q9BYS1 174 aa11.06□□□□□ -0.64
CDC42BPB-203ENST00000558867 MUC21A0A0G2JKD1 596 aa11.05□□□□□ -0.64
CDC42BPB-203ENST00000558867 A0A0J9YY99 117 aa11.05□□□□□ -0.64
CDC42BPB-203ENST00000558867 MUC21A0A140T8X8 626 aa11.05□□□□□ -0.64
CDC42BPB-203ENST00000558867 PMCHP20382 165 aa11.05□□□□□ -0.64
CDC42BPB-203ENST00000558867 ESRGQ1W209 222 aa11.05□□□□□ -0.64
CDC42BPB-203ENST00000558867 OR10D4PQ8NGN7 298 aa11.05□□□□□ -0.64
CDC42BPB-203ENST00000558867 RNASE8Q8TDE3 154 aaKnown RBP11.05□□□□□ -0.64
CDC42BPB-203ENST00000558867 PRELID3AQ96N28 172 aa11.05□□□□□ -0.64
CDC42BPB-203ENST00000558867 AP1S3Q96PC3 154 aa11.05□□□□□ -0.64
CDC42BPB-203ENST00000558867 GSN-AS1Q9NRJ2 163 aa11.05□□□□□ -0.64
CDC42BPB-203ENST00000558867 PRSS47A8MTI9 375 aa11.04□□□□□ -0.64
CDC42BPB-203ENST00000558867 D6R8Y8 96 aa11.04□□□□□ -0.64
CDC42BPB-203ENST00000558867 IQCJQ1A5X6 159 aa11.04□□□□□ -0.64
CDC42BPB-203ENST00000558867 MRAP2Q96G30 205 aa11.04□□□□□ -0.64
CDC42BPB-203ENST00000558867 DPH3P1Q9H4G8 78 aa11.04□□□□□ -0.64
CDC42BPB-203ENST00000558867 EVI2AP22794 236 aa11.03□□□□□ -0.64
CDC42BPB-203ENST00000558867 CKS2P33552 79 aa11.03□□□□□ -0.64
CDC42BPB-203ENST00000558867 NIT1Q86X76 327 aa11.03□□□□□ -0.64
CDC42BPB-203ENST00000558867 SYT8Q8NBV8 401 aa11.03□□□□□ -0.64
CDC42BPB-203ENST00000558867 URB1-AS1Q96HZ7 61 aa11.03□□□□□ -0.64
CDC42BPB-203ENST00000558867 GAGE12BA1L429 117 aa11.02□□□□□ -0.65
CDC42BPB-203ENST00000558867 LINC01546A6NGU7 62 aa11.02□□□□□ -0.65
CDC42BPB-203ENST00000558867 M0R381 172 aa11.02□□□□□ -0.65
CDC42BPB-203ENST00000558867 GAGE7O76087 117 aa11.02□□□□□ -0.65
CDC42BPB-203ENST00000558867 LINC00614P0C842 121 aa11.02□□□□□ -0.65
CDC42BPB-203ENST00000558867 GAGE12FP0CL80 117 aa11.02□□□□□ -0.65
CDC42BPB-203ENST00000558867 GAGE12GP0CL81 117 aa11.02□□□□□ -0.65
CDC42BPB-203ENST00000558867 GAGE12IP0CL82 117 aa11.02□□□□□ -0.65
CDC42BPB-203ENST00000558867 LINC00315P59091 139 aa11.02□□□□□ -0.65
CDC42BPB-203ENST00000558867 LINC00612Q8N6U2 182 aa11.02□□□□□ -0.65
CDC42BPB-203ENST00000558867 SIVA1O15304 175 aa11.01□□□□□ -0.65
CDC42BPB-203ENST00000558867 HSBP1O75506 76 aa11.01□□□□□ -0.65
CDC42BPB-203ENST00000558867 JOSD1Q15040 202 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPB-203ENST00000558867 Q5VSD8 79 aa11.01□□□□□ -0.65
CDC42BPB-203ENST00000558867 NFE4Q86UQ8 179 aa11.01□□□□□ -0.65
CDC42BPB-203ENST00000558867 SAMD10Q9BYL1 202 aa11.01□□□□□ -0.65
CDC42BPB-203ENST00000558867 KIF25-AS1Q9Y6Z4 181 aa11.01□□□□□ -0.65
CDC42BPB-203ENST00000558867 PPP1R17O96001 155 aa11□□□□□ -0.65
CDC42BPB-203ENST00000558867 SSTP61278 116 aa11□□□□□ -0.65
CDC42BPB-203ENST00000558867 ZNF415Q09FC8 603 aa11□□□□□ -0.65
CDC42BPB-203ENST00000558867 PYY3Q5JQD4 70 aa11□□□□□ -0.65
CDC42BPB-203ENST00000558867 SPXQ9BT56 116 aa11□□□□□ -0.65
CDC42BPB-203ENST00000558867 MDFICQ9P1T7 246 aa11□□□□□ -0.65
CDC42BPB-203ENST00000558867 NPYP01303 97 aa10.99□□□□□ -0.65
CDC42BPB-203ENST00000558867 AMTP48728 403 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms