RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 MGPP08493 103 aa5.72□□□□□ -1.49
PSEN1-223ENST00000557511 SRP19P09132 144 aaKnown RBP5.72□□□□□ -1.49
PSEN1-223ENST00000557511 GZMBP10144 247 aa5.72□□□□□ -1.49
PSEN1-223ENST00000557511 TWIST1Q15672 202 aa5.72□□□□□ -1.49
PSEN1-223ENST00000557511 TMEM241Q24JQ0 296 aa5.72□□□□□ -1.49
PSEN1-223ENST00000557511 LELP1Q5T871 98 aa5.72□□□□□ -1.49
PSEN1-223ENST00000557511 FAM231DQ6ZW35 169 aa5.72□□□□□ -1.49
PSEN1-223ENST00000557511 NFE4Q86UQ8 179 aa5.72□□□□□ -1.49
PSEN1-223ENST00000557511 URGCP-MRPS24S4R325 110 aa5.72□□□□□ -1.49
PSEN1-223ENST00000557511 VPS13DQ5THJ4 4388 aa5.71□□□□□ -1.5
PSEN1-223ENST00000557511 IGLC6P0CF74 106 aa5.71□□□□□ -1.5
PSEN1-223ENST00000557511 UFSP1Q6NVU6 142 aa5.71□□□□□ -1.5
PSEN1-223ENST00000557511 WDR73Q6P4I2 378 aa5.71□□□□□ -1.5
PSEN1-223ENST00000557511 LYZL1Q6UWQ5 148 aa5.71□□□□□ -1.5
PSEN1-223ENST00000557511 TNFRSF18Q9Y5U5 241 aa5.71□□□□□ -1.5
PSEN1-223ENST00000557511 TRBV7-3A0A075B6L6 115 aa5.7□□□□□ -1.5
PSEN1-223ENST00000557511 K7EN84 100 aa5.7□□□□□ -1.5
PSEN1-223ENST00000557511 NTF3P20783 257 aa5.7□□□□□ -1.5
PSEN1-223ENST00000557511 ADIRFQ15847 76 aa5.7□□□□□ -1.5
PSEN1-223ENST00000557511 TMEM97Q5BJF2 176 aa5.7□□□□□ -1.5
PSEN1-223ENST00000557511 CT83Q5H943 113 aa5.7□□□□□ -1.5
PSEN1-223ENST00000557511 Q6ZSN1 163 aa5.7□□□□□ -1.5
PSEN1-223ENST00000557511 LINC01551Q86U37 167 aa5.7□□□□□ -1.5
PSEN1-223ENST00000557511 WFDC10BQ8IUB3 73 aa5.7□□□□□ -1.5
PSEN1-223ENST00000557511 DPH3P1Q9H4G8 78 aa5.7□□□□□ -1.5
PSEN1-223ENST00000557511 NAT8Q9UHE5 227 aa5.7□□□□□ -1.5
PSEN1-223ENST00000557511 RTL8CO15255 209 aa5.69□□□□□ -1.5
PSEN1-223ENST00000557511 DNAH10OSP0CZ25 163 aa5.69□□□□□ -1.5
PSEN1-223ENST00000557511 PKIAP61925 76 aa5.69□□□□□ -1.5
PSEN1-223ENST00000557511 ZNF575Q86XF7 245 aa5.69□□□□□ -1.5
PSEN1-223ENST00000557511 DNAJC30Q96LL9 226 aa5.69□□□□□ -1.5
PSEN1-223ENST00000557511 OSTCQ9NRP0 149 aa5.69□□□□□ -1.5
PSEN1-223ENST00000557511 MSRB1Q9NZV6 116 aa5.69□□□□□ -1.5
PSEN1-223ENST00000557511 A0A087WX48 190 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 FAM231BA6NCW3 169 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 TMEM262E9PQX1 116 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 PSCAO43653 123 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 IGHV3-30P01768 117 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 IGHV3-33P01772 117 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 IGHV3-30-3P0DP02 117 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 IGHV3-30-5P0DP03 117 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 CTRLP40313 264 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 LINC00315P59091 139 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 ELOBQ15370 118 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 LINC01556Q5JQF7 62 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 DAZ4Q86SG3 579 aaKnown RBP5.68□□□□□ -1.5
PSEN1-223ENST00000557511 OR10G8Q8NGN5 311 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 TSKUQ8WUA8 353 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 PGLYRP4Q96LB8 373 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 GFRA4Q9GZZ7 299 aa5.68□□□□□ -1.5
PSEN1-223ENST00000557511 DAZ3Q9NR90 486 aaKnown RBP5.68□□□□□ -1.5
PSEN1-223ENST00000557511 EPPK1P58107 5090 aaKnown RBP5.67□□□□□ -1.5
PSEN1-223ENST00000557511 NACAE9PAV3 2078 aa5.67□□□□□ -1.5
PSEN1-223ENST00000557511 A0A1B0GUT8 65 aa5.67□□□□□ -1.5
PSEN1-223ENST00000557511 UBE2D3P61077 147 aa5.67□□□□□ -1.5
PSEN1-223ENST00000557511 RPL23P62829 140 aaKnown RBP5.67□□□□□ -1.5
PSEN1-223ENST00000557511 UBE2D2P62837 147 aa5.67□□□□□ -1.5
PSEN1-223ENST00000557511 RIGQ13278 110 aa5.67□□□□□ -1.5
PSEN1-223ENST00000557511 SUMO4Q6EEV6 95 aa5.67□□□□□ -1.5
PSEN1-223ENST00000557511 RASL11AQ6T310 242 aa5.67□□□□□ -1.5
PSEN1-223ENST00000557511 NEXN-AS1Q8NBZ9 246 aa5.67□□□□□ -1.5
PSEN1-223ENST00000557511 ISOC2Q96AB3 205 aa5.67□□□□□ -1.5
PSEN1-223ENST00000557511 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
PSEN1-223ENST00000557511 BIRC6Q9NR09 4857 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 HIGD1CA8MV81 97 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 PPP1R2P9O14990 202 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 LINC00694P0DN24 101 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 FOXA3P55318 350 aaPredicted RBP5.66□□□□□ -1.5
PSEN1-223ENST00000557511 FRZBQ92765 325 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 RMI2Q96E14 147 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 CHCHD5Q9BSY4 110 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 CHCHD7Q9BUK0 85 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 TM2D2Q9BX73 214 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 CNFNQ9BYD5 112 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 NIT2Q9NQR4 276 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 NAT8BQ9UHF3 227 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 KIF25-AS1Q9Y6Z4 181 aa5.66□□□□□ -1.5
PSEN1-223ENST00000557511 KMT2AQ03164 3969 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 TRBV25-1A0A075B6N4 114 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 TRBV6-8A0A0A6YYG3 113 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 TRAV8-3A0A0A6YYJ7 113 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 IBA57-AS1B1ANH7 110 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 M0QY20 66 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 S100A8P05109 93 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 PNRC1Q12796 327 aaPredicted RBP5.65□□□□□ -1.5
PSEN1-223ENST00000557511 LAGE3Q14657 143 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 CLLU1Q5K131 121 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 GTSF1Q8WW33 167 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 KRTAP1-5Q9BYS1 174 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 Q9HAA7 133 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 COX11Q9Y6N1 276 aa5.65□□□□□ -1.5
PSEN1-223ENST00000557511 DNAH6Q9C0G6 4158 aa5.64□□□□□ -1.51
PSEN1-223ENST00000557511 IGHV1-24A0A0C4DH33 117 aa5.64□□□□□ -1.51
PSEN1-223ENST00000557511 A0A1B0GW15 77 aa5.64□□□□□ -1.51
PSEN1-223ENST00000557511 C9JQL5 133 aa5.64□□□□□ -1.51
PSEN1-223ENST00000557511 UBE2L6O14933 153 aa5.64□□□□□ -1.51
PSEN1-223ENST00000557511 CRPP02741 224 aa5.64□□□□□ -1.51
PSEN1-223ENST00000557511 COTL1Q14019 142 aa5.64□□□□□ -1.51
PSEN1-223ENST00000557511 NIT1Q86X76 327 aa5.64□□□□□ -1.51
PSEN1-223ENST00000557511 Q9UF83 564 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms