RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 RNASE7Q9H1E1 156 aaKnown RBP6.87□□□□□ -1.31
HNRNPC-208ENST00000553753 CEBPGP53567 150 aa6.86□□□□□ -1.31
HNRNPC-208ENST00000553753 LAGE3Q14657 143 aa6.86□□□□□ -1.31
HNRNPC-208ENST00000553753 LYZL1Q6UWQ5 148 aa6.86□□□□□ -1.31
HNRNPC-208ENST00000553753 NEXN-AS1Q8NBZ9 246 aa6.86□□□□□ -1.31
HNRNPC-208ENST00000553753 A0A087WTM6 91 aa6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 PSCAO43653 123 aa6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 SNAPINO95295 136 aa6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 NTF3P20783 257 aa6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 Q8N3U1 123 aa6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 RPP21Q9H633 154 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 Q9HAA7 133 aa6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 PGPEP1Q9NXJ5 209 aa6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 URGCP-MRPS24S4R325 110 aa6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 NDUFS6O75380 124 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 DAZ4Q86SG3 579 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 NIT1Q86X76 327 aa6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 DAZ3Q9NR90 486 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-208ENST00000553753 HSPG2P98160 4391 aa6.84□□□□□ -1.31
HNRNPC-208ENST00000553753 TRBV6-8A0A0A6YYG3 113 aa6.84□□□□□ -1.31
HNRNPC-208ENST00000553753 TRGC1P0CF51 173 aa6.84□□□□□ -1.31
HNRNPC-208ENST00000553753 CTRLP40313 264 aa6.84□□□□□ -1.31
HNRNPC-208ENST00000553753 WDR73Q6P4I2 378 aa6.84□□□□□ -1.31
HNRNPC-208ENST00000553753 RYR1P21817 5038 aa6.84□□□□□ -1.32
HNRNPC-208ENST00000553753 A0A087WX48 190 aa6.83□□□□□ -1.32
HNRNPC-208ENST00000553753 TRAV8-3A0A0A6YYJ7 113 aa6.83□□□□□ -1.32
HNRNPC-208ENST00000553753 H7C1H1 209 aa6.83□□□□□ -1.32
HNRNPC-208ENST00000553753 M0QY20 66 aa6.83□□□□□ -1.32
HNRNPC-208ENST00000553753 MGPP08493 103 aa6.83□□□□□ -1.32
HNRNPC-208ENST00000553753 TEX261Q6UWH6 196 aa6.83□□□□□ -1.32
HNRNPC-208ENST00000553753 SMIM7Q9BQ49 75 aa6.83□□□□□ -1.32
HNRNPC-208ENST00000553753 CNFNQ9BYD5 112 aa6.83□□□□□ -1.32
HNRNPC-208ENST00000553753 ZNF727A8MUV8 499 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 CDK2AP2O75956 126 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 TWIST1Q15672 202 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 CDPF1Q6NVV7 123 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 FAM231DQ6ZW35 169 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 GTSF1Q8WW33 167 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 CHCHD7Q9BUK0 85 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 DPH3P1Q9H4G8 78 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 LRCOL1A6NCL2 159 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 A8MWL6 223 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 TMEM262E9PQX1 116 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 GATCO43716 136 aaKnown RBP6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 SRP19P09132 144 aaKnown RBP6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 FUSP35637 526 aaKnown RBP eCLIP6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 CLLU1Q5K131 121 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 SUMO4Q6EEV6 95 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 KCNIP4Q6PIL6 250 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 LINC01551Q86U37 167 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 DNAJC30Q96LL9 226 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 TM2D2Q9BX73 214 aa6.82□□□□□ -1.32
HNRNPC-208ENST00000553753 APOBP04114 4563 aaKnown RBP6.81□□□□□ -1.32
HNRNPC-208ENST00000553753 TMEM97Q5BJF2 176 aa6.81□□□□□ -1.32
HNRNPC-208ENST00000553753 KLK12Q9UKR0 248 aa6.81□□□□□ -1.32
HNRNPC-208ENST00000553753 PCLOQ9Y6V0 5065 aa6.81□□□□□ -1.32
HNRNPC-208ENST00000553753 FOXA3P55318 350 aaPredicted RBP6.8□□□□□ -1.32
HNRNPC-208ENST00000553753 ELOBQ15370 118 aa6.8□□□□□ -1.32
HNRNPC-208ENST00000553753 CT83Q5H943 113 aa6.8□□□□□ -1.32
HNRNPC-208ENST00000553753 RASL11AQ6T310 242 aa6.8□□□□□ -1.32
HNRNPC-208ENST00000553753 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
HNRNPC-208ENST00000553753 CHCHD5Q9BSY4 110 aa6.8□□□□□ -1.32
HNRNPC-208ENST00000553753 NIT2Q9NQR4 276 aa6.8□□□□□ -1.32
HNRNPC-208ENST00000553753 COX11Q9Y6N1 276 aa6.8□□□□□ -1.32
HNRNPC-208ENST00000553753 TRBV25-1A0A075B6N4 114 aa6.79□□□□□ -1.32
HNRNPC-208ENST00000553753 FAM74A3Q4VXF1 159 aa6.79□□□□□ -1.32
HNRNPC-208ENST00000553753 MPV17L2Q567V2 206 aa6.79□□□□□ -1.32
HNRNPC-208ENST00000553753 SMIM15Q7Z3B0 74 aa6.79□□□□□ -1.32
HNRNPC-208ENST00000553753 Q8N814 137 aa6.79□□□□□ -1.32
HNRNPC-208ENST00000553753 UBE2WQ96B02 151 aa6.79□□□□□ -1.32
HNRNPC-208ENST00000553753 PGLYRP4Q96LB8 373 aa6.79□□□□□ -1.32
HNRNPC-208ENST00000553753 C9JQL5 133 aa6.78□□□□□ -1.32
HNRNPC-208ENST00000553753 PKIAP61925 76 aa6.78□□□□□ -1.32
HNRNPC-208ENST00000553753 PEA15Q15121 130 aa6.78□□□□□ -1.32
HNRNPC-208ENST00000553753 TMEM241Q24JQ0 296 aa6.78□□□□□ -1.32
HNRNPC-208ENST00000553753 TSKUQ8WUA8 353 aa6.78□□□□□ -1.32
HNRNPC-208ENST00000553753 FRZBQ92765 325 aa6.78□□□□□ -1.32
HNRNPC-208ENST00000553753 RMI2Q96E14 147 aa6.78□□□□□ -1.32
HNRNPC-208ENST00000553753 GFRA4Q9GZZ7 299 aa6.78□□□□□ -1.32
HNRNPC-208ENST00000553753 SMDT1Q9H4I9 107 aa6.78□□□□□ -1.32
HNRNPC-208ENST00000553753 OSTCQ9NRP0 149 aa6.78□□□□□ -1.32
HNRNPC-208ENST00000553753 IGKV2D-24A0A075B6R9 120 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 FAM231BA6NCW3 169 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 HIGD1CA8MV81 97 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 F8W036 122 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 ANGP03950 147 aaKnown RBP6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 SRSF3P84103 164 aaKnown RBP6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 Q0VG73 95 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 IQCJQ1A5X6 159 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 MAPKAPK5-AS1Q8N8E1 139 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 C15orf54Q8N8G6 183 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 Q8N976 141 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 GATD1Q8NB37 220 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 NTN5Q8WTR8 489 aaPredicted RBP6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 BORCS7Q96B45 105 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 IGLV5-52A0A0A0MRZ9 124 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 TRAV26-2A0A0B4J265 109 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 IGHV1-24A0A0C4DH33 117 aa6.77□□□□□ -1.33
HNRNPC-208ENST00000553753 GCSHP23434 173 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms