RNA–Protein interactions for RNA: ENST00000549547.1

PRPF40B-210, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-210ENST00000549547 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 RPL36ALQ969Q0 106 aaKnown RBP8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 ISOC2Q96AB3 205 aa8.88□□□□□ -0.99
PRPF40B-210ENST00000549547 IGHV3-38A0A0C4DH36 116 aa8.87□□□□□ -0.99
PRPF40B-210ENST00000549547 A8MWL6 223 aa8.87□□□□□ -0.99
PRPF40B-210ENST00000549547 F5H697 171 aa8.87□□□□□ -0.99
PRPF40B-210ENST00000549547 ADIRFQ15847 76 aa8.87□□□□□ -0.99
PRPF40B-210ENST00000549547 LYZL1Q6UWQ5 148 aa8.87□□□□□ -0.99
PRPF40B-210ENST00000549547 KRTAP1-5Q9BYS1 174 aa8.87□□□□□ -0.99
PRPF40B-210ENST00000549547 TRBV7-3A0A075B6L6 115 aa8.86□□□□□ -0.99
PRPF40B-210ENST00000549547 C7orf77A4D0Y5 90 aa8.86□□□□□ -0.99
PRPF40B-210ENST00000549547 H7C1H1 209 aa8.86□□□□□ -0.99
PRPF40B-210ENST00000549547 NFE4Q86UQ8 179 aa8.86□□□□□ -0.99
PRPF40B-210ENST00000549547 C15orf54Q8N8G6 183 aa8.86□□□□□ -0.99
PRPF40B-210ENST00000549547 OR10G8Q8NGN5 311 aa8.86□□□□□ -0.99
PRPF40B-210ENST00000549547 CNFNQ9BYD5 112 aa8.86□□□□□ -0.99
PRPF40B-210ENST00000549547 NTF3P20783 257 aa8.85□□□□□ -0.99
PRPF40B-210ENST00000549547 TWIST1Q15672 202 aa8.85□□□□□ -0.99
PRPF40B-210ENST00000549547 LINC01556Q5JQF7 62 aa8.85□□□□□ -0.99
PRPF40B-210ENST00000549547 SMIM15Q7Z3B0 74 aa8.85□□□□□ -0.99
PRPF40B-210ENST00000549547 BORCS7Q96B45 105 aa8.85□□□□□ -0.99
PRPF40B-210ENST00000549547 DPH3P1Q9H4G8 78 aa8.85□□□□□ -0.99
PRPF40B-210ENST00000549547 OSTCQ9NRP0 149 aa8.85□□□□□ -0.99
PRPF40B-210ENST00000549547 KIF25-AS1Q9Y6Z4 181 aa8.85□□□□□ -0.99
PRPF40B-210ENST00000549547 PKD1P98161 4303 aa8.84□□□□□ -0.99
PRPF40B-210ENST00000549547 MGPP08493 103 aa8.84□□□□□ -0.99
PRPF40B-210ENST00000549547 LINC00315P59091 139 aa8.84□□□□□ -0.99
PRPF40B-210ENST00000549547 UBE2D3P61077 147 aa8.84□□□□□ -0.99
PRPF40B-210ENST00000549547 UBE2D2P62837 147 aa8.84□□□□□ -0.99
PRPF40B-210ENST00000549547 RHEBQ15382 184 aa8.84□□□□□ -0.99
PRPF40B-210ENST00000549547 GFRA4Q9GZZ7 299 aa8.84□□□□□ -0.99
PRPF40B-210ENST00000549547 FAM231BA6NCW3 169 aa8.83□□□□□ -1
PRPF40B-210ENST00000549547 PCP4L1A6NKN8 68 aa8.83□□□□□ -1
PRPF40B-210ENST00000549547 SCO1O75880 301 aa8.83□□□□□ -1
PRPF40B-210ENST00000549547 TMEM97Q5BJF2 176 aa8.83□□□□□ -1
PRPF40B-210ENST00000549547 NEXN-AS1Q8NBZ9 246 aa8.83□□□□□ -1
PRPF40B-210ENST00000549547 GTSF1Q8WW33 167 aa8.83□□□□□ -1
PRPF40B-210ENST00000549547 DNAJC30Q96LL9 226 aa8.83□□□□□ -1
PRPF40B-210ENST00000549547 RPS10P5Q9NQ39 176 aa8.83□□□□□ -1
PRPF40B-210ENST00000549547 MSRB1Q9NZV6 116 aa8.83□□□□□ -1
PRPF40B-210ENST00000549547 Q9UF83 564 aa8.83□□□□□ -1
PRPF40B-210ENST00000549547 A0A1B0GVY2 172 aa8.82□□□□□ -1
PRPF40B-210ENST00000549547 S100A8P05109 93 aa8.82□□□□□ -1
PRPF40B-210ENST00000549547 FOXA3P55318 350 aaPredicted RBP8.82□□□□□ -1
PRPF40B-210ENST00000549547 TSKUQ8WUA8 353 aa8.82□□□□□ -1
PRPF40B-210ENST00000549547 V9GYV3 84 aa8.82□□□□□ -1
PRPF40B-210ENST00000549547 MT-ND4LP03901 98 aa8.81□□□□□ -1
PRPF40B-210ENST00000549547 SUMO4Q6EEV6 95 aa8.81□□□□□ -1
PRPF40B-210ENST00000549547 DAZ4Q86SG3 579 aaKnown RBP8.81□□□□□ -1
PRPF40B-210ENST00000549547 ANAPC16Q96DE5 110 aa8.81□□□□□ -1
PRPF40B-210ENST00000549547 PGLYRP4Q96LB8 373 aa8.81□□□□□ -1
PRPF40B-210ENST00000549547 CTDSP1Q9GZU7 261 aa8.81□□□□□ -1
PRPF40B-210ENST00000549547 DAZ3Q9NR90 486 aaKnown RBP8.81□□□□□ -1
PRPF40B-210ENST00000549547 TMEM242Q9NWH2 141 aa8.81□□□□□ -1
PRPF40B-210ENST00000549547 TNFRSF18Q9Y5U5 241 aa8.81□□□□□ -1
PRPF40B-210ENST00000549547 URGCP-MRPS24S4R325 110 aa8.81□□□□□ -1
PRPF40B-210ENST00000549547 PKHD1P08F94 4074 aa8.81□□□□□ -1
PRPF40B-210ENST00000549547 HIGD1CA8MV81 97 aa8.8□□□□□ -1
PRPF40B-210ENST00000549547 M0QY20 66 aa8.8□□□□□ -1
PRPF40B-210ENST00000549547 SMIM6P0DI80 62 aa8.8□□□□□ -1
PRPF40B-210ENST00000549547 PKIAP61925 76 aa8.8□□□□□ -1
PRPF40B-210ENST00000549547 TNP2Q05952 138 aa8.8□□□□□ -1
PRPF40B-210ENST00000549547 LAGE3Q14657 143 aa8.8□□□□□ -1
PRPF40B-210ENST00000549547 KCNIP4Q6PIL6 250 aa8.8□□□□□ -1
PRPF40B-210ENST00000549547 RASL11AQ6T310 242 aa8.8□□□□□ -1
PRPF40B-210ENST00000549547 FRZBQ92765 325 aa8.8□□□□□ -1
PRPF40B-210ENST00000549547 C12orf57Q99622 126 aa8.8□□□□□ -1
PRPF40B-210ENST00000549547 A0A1B0GUT8 65 aa8.79□□□□□ -1
PRPF40B-210ENST00000549547 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
PRPF40B-210ENST00000549547 PPP1R2P9O14990 202 aa8.79□□□□□ -1
PRPF40B-210ENST00000549547 IGHV3-30P01768 117 aa8.79□□□□□ -1
PRPF40B-210ENST00000549547 IGHV3-33P01772 117 aa8.79□□□□□ -1
PRPF40B-210ENST00000549547 IGHV3-30-3P0DP02 117 aa8.79□□□□□ -1
PRPF40B-210ENST00000549547 IGHV3-30-5P0DP03 117 aa8.79□□□□□ -1
PRPF40B-210ENST00000549547 CHCHD7Q9BUK0 85 aa8.79□□□□□ -1
PRPF40B-210ENST00000549547 DNAH11Q96DT5 4516 aa8.79□□□□□ -1
PRPF40B-210ENST00000549547 TRBV6-8A0A0A6YYG3 113 aa8.78□□□□□ -1
PRPF40B-210ENST00000549547 EREGO14944 169 aa8.78□□□□□ -1
PRPF40B-210ENST00000549547 Q6ZRN7 208 aaPredicted RBP8.78□□□□□ -1
PRPF40B-210ENST00000549547 YPEL4Q96NS1 127 aa8.78□□□□□ -1
PRPF40B-210ENST00000549547 NIT2Q9NQR4 276 aa8.78□□□□□ -1
PRPF40B-210ENST00000549547 A0A087WX48 190 aa8.77□□□□□ -1.01
PRPF40B-210ENST00000549547 S100PP25815 95 aa8.77□□□□□ -1.01
PRPF40B-210ENST00000549547 RIGQ13278 110 aa8.77□□□□□ -1.01
PRPF40B-210ENST00000549547 ELOBQ15370 118 aa8.77□□□□□ -1.01
PRPF40B-210ENST00000549547 NIT1Q86X76 327 aa8.77□□□□□ -1.01
PRPF40B-210ENST00000549547 CBLN2Q8IUK8 224 aa8.77□□□□□ -1.01
PRPF40B-210ENST00000549547 NAT8BQ9UHF3 227 aa8.77□□□□□ -1.01
PRPF40B-210ENST00000549547 TRAV8-3A0A0A6YYJ7 113 aa8.76□□□□□ -1.01
PRPF40B-210ENST00000549547 SMIM27A0A1W2PRY6 76 aa8.76□□□□□ -1.01
PRPF40B-210ENST00000549547 PSCAO43653 123 aa8.76□□□□□ -1.01
PRPF40B-210ENST00000549547 IMMP2LQ96T52 175 aa8.76□□□□□ -1.01
PRPF40B-210ENST00000549547 SMCO4Q9NRQ5 59 aa8.76□□□□□ -1.01
PRPF40B-210ENST00000549547 DYNC1H1Q14204 4646 aaKnown RBP8.76□□□□□ -1.01
PRPF40B-210ENST00000549547 TRBV25-1A0A075B6N4 114 aa8.75□□□□□ -1.01
PRPF40B-210ENST00000549547 AKR1D1P51857 326 aa8.75□□□□□ -1.01
PRPF40B-210ENST00000549547 NUP35Q8NFH5 326 aa8.75□□□□□ -1.01
PRPF40B-210ENST00000549547 CHCHD5Q9BSY4 110 aa8.75□□□□□ -1.01
PRPF40B-210ENST00000549547 TM2D2Q9BX73 214 aa8.75□□□□□ -1.01
PRPF40B-210ENST00000549547 TMEM191AQ9H0A3 160 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms