RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 EPG5Q9HCE0 2579 aa8.03□□□□□ -1.12
RTN3-208ENST00000537981 TRBV30A0A0K0K1B3 111 aa8.02□□□□□ -1.12
RTN3-208ENST00000537981 FAM240AA0A1B0GVK7 77 aa8.02□□□□□ -1.12
RTN3-208ENST00000537981 LGALS3P17931 250 aaKnown RBP8.02□□□□□ -1.12
RTN3-208ENST00000537981 TNFAIP6P98066 277 aaPredicted RBP8.02□□□□□ -1.12
RTN3-208ENST00000537981 RHOHQ15669 191 aa8.02□□□□□ -1.12
RTN3-208ENST00000537981 ADAMTSL4-AS1Q5T5F5 129 aa8.02□□□□□ -1.12
RTN3-208ENST00000537981 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.12
RTN3-208ENST00000537981 PIEZO2Q9H5I5 2752 aa8.02□□□□□ -1.13
RTN3-208ENST00000537981 TRAV12-3A0A0B4J271 114 aa8.02□□□□□ -1.13
RTN3-208ENST00000537981 VCYO14598 125 aa8.02□□□□□ -1.13
RTN3-208ENST00000537981 ANKRD11Q6UB99 2663 aaPredicted RBP8.02□□□□□ -1.13
RTN3-208ENST00000537981 COL12A1Q99715 3063 aa8.02□□□□□ -1.13
RTN3-208ENST00000537981 IGHV3-49A0A0A0MS15 119 aa8.01□□□□□ -1.13
RTN3-208ENST00000537981 IGIPA6NJ69 53 aa8.01□□□□□ -1.13
RTN3-208ENST00000537981 IGLV1-44P01699 117 aa8.01□□□□□ -1.13
RTN3-208ENST00000537981 IGHV1-46P01743 117 aa8.01□□□□□ -1.13
RTN3-208ENST00000537981 DEFB1P60022 68 aa8.01□□□□□ -1.13
RTN3-208ENST00000537981 DEFB121Q5J5C9 76 aa8.01□□□□□ -1.13
RTN3-208ENST00000537981 ZNF256Q9Y2P7 627 aaPredicted RBP8.01□□□□□ -1.13
RTN3-208ENST00000537981 M0R1B8 84 aa8.01□□□□□ -1.13
RTN3-208ENST00000537981 C9orf47Q6ZRZ4 202 aa8.01□□□□□ -1.13
RTN3-208ENST00000537981 I3L3M4 83 aa8□□□□□ -1.13
RTN3-208ENST00000537981 PRSS2P07478 247 aa8□□□□□ -1.13
RTN3-208ENST00000537981 CRYGAP11844 174 aa8□□□□□ -1.13
RTN3-208ENST00000537981 C22orf34Q6ZV56 151 aa8□□□□□ -1.13
RTN3-208ENST00000537981 C9orf106Q8NAJ2 232 aa8□□□□□ -1.13
RTN3-208ENST00000537981 CSMD2Q7Z408 3487 aa8□□□□□ -1.13
RTN3-208ENST00000537981 ZNF415Q09FC8 603 aa8□□□□□ -1.13
RTN3-208ENST00000537981 A0A0A0MQY5 61 aa7.99□□□□□ -1.13
RTN3-208ENST00000537981 TRBV7-1A0A0A6YYK4 115 aa7.99□□□□□ -1.13
RTN3-208ENST00000537981 TRAV13-1A0A0B4J241 112 aa7.99□□□□□ -1.13
RTN3-208ENST00000537981 ATP1A1-AS1Q5TC04 95 aa7.99□□□□□ -1.13
RTN3-208ENST00000537981 GPHB5Q86YW7 130 aa7.99□□□□□ -1.13
RTN3-208ENST00000537981 DAND5Q8N907 189 aa7.99□□□□□ -1.13
RTN3-208ENST00000537981 C10orf105Q8TEF2 133 aa7.99□□□□□ -1.13
RTN3-208ENST00000537981 JPT2Q9H910 190 aa7.99□□□□□ -1.13
RTN3-208ENST00000537981 H3BT86 120 aa7.99□□□□□ -1.13
RTN3-208ENST00000537981 LST1O00453 97 aa7.99□□□□□ -1.13
RTN3-208ENST00000537981 LITAFQ99732 161 aa7.99□□□□□ -1.13
RTN3-208ENST00000537981 A0A087WVE0 104 aa7.98□□□□□ -1.13
RTN3-208ENST00000537981 A0A0J9YXY3 114 aa7.98□□□□□ -1.13
RTN3-208ENST00000537981 RPS28P62857 69 aaKnown RBP7.98□□□□□ -1.13
RTN3-208ENST00000537981 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
RTN3-208ENST00000537981 SLC50A1Q9BRV3 221 aa7.98□□□□□ -1.13
RTN3-208ENST00000537981 DCANP1Q8TF63 244 aa7.97□□□□□ -1.13
RTN3-208ENST00000537981 IGHV1-3A0A0C4DH29 117 aa7.97□□□□□ -1.13
RTN3-208ENST00000537981 A0A1W2PNU3 283 aaPredicted RBP7.97□□□□□ -1.13
RTN3-208ENST00000537981 ZNF876PQ49A33 203 aa7.97□□□□□ -1.13
RTN3-208ENST00000537981 CD164L2Q6UWJ8 174 aa7.97□□□□□ -1.13
RTN3-208ENST00000537981 C5orf38Q86SI9 138 aa7.97□□□□□ -1.13
RTN3-208ENST00000537981 MDS2Q8NDY4 140 aa7.97□□□□□ -1.13
RTN3-208ENST00000537981 IMUPQ9GZP8 106 aa7.97□□□□□ -1.13
RTN3-208ENST00000537981 PRO0628Q9UI54 55 aa7.97□□□□□ -1.13
RTN3-208ENST00000537981 PYGO1Q9Y3Y4 419 aa7.97□□□□□ -1.13
RTN3-208ENST00000537981 CLPSL1A2RUU4 121 aa7.96□□□□□ -1.13
RTN3-208ENST00000537981 TRACP01848 142 aa7.96□□□□□ -1.13
RTN3-208ENST00000537981 LINC00336Q6ZUF6 198 aa7.96□□□□□ -1.14
RTN3-208ENST00000537981 RETNQ9HD89 108 aa7.96□□□□□ -1.14
RTN3-208ENST00000537981 C22orf24Q9Y442 160 aa7.96□□□□□ -1.14
RTN3-208ENST00000537981 SLC25A15Q9Y619 301 aa7.96□□□□□ -1.14
RTN3-208ENST00000537981 SPTBN1Q01082 2364 aaKnown RBP7.96□□□□□ -1.14
RTN3-208ENST00000537981 IGHV4-4A0A075B6R2 117 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 A0A0J9YXV3 536 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 H3BS24 57 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 IGHV1-8P0DP01 117 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 LOXP28300 417 aaPredicted RBP7.95□□□□□ -1.14
RTN3-208ENST00000537981 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 LINC00643Q86TS7 51 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 APRG1Q8IVJ8 170 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 UPK3BQ9BT76 320 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 BSNQ9UPA5 3926 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.95□□□□□ -1.14
RTN3-208ENST00000537981 COX7A1P24310 79 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 PKIGQ9Y2B9 76 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 ZFYVE26Q68DK2 2539 aa7.95□□□□□ -1.14
RTN3-208ENST00000537981 LEPROTO15243 131 aa7.94□□□□□ -1.14
RTN3-208ENST00000537981 GNRH2O43555 120 aa7.94□□□□□ -1.14
RTN3-208ENST00000537981 HIST1H4AP62805 103 aaKnown RBP7.94□□□□□ -1.14
RTN3-208ENST00000537981 NDPQ00604 133 aa7.94□□□□□ -1.14
RTN3-208ENST00000537981 IL17DQ8TAD2 202 aa7.94□□□□□ -1.14
RTN3-208ENST00000537981 TIMM21Q9BVV7 248 aa7.94□□□□□ -1.14
RTN3-208ENST00000537981 COL27A1Q8IZC6 1860 aaPredicted RBP7.94□□□□□ -1.14
RTN3-208ENST00000537981 IGKV3D-7A0A0C4DH55 119 aa7.94□□□□□ -1.14
RTN3-208ENST00000537981 NXPH4O95158 308 aa7.94□□□□□ -1.14
RTN3-208ENST00000537981 CTSGP08311 255 aa7.94□□□□□ -1.14
RTN3-208ENST00000537981 KLRB1Q12918 225 aa7.94□□□□□ -1.14
RTN3-208ENST00000537981 DAZ2Q13117 558 aaKnown RBP7.94□□□□□ -1.14
RTN3-208ENST00000537981 DAZ4Q86SG3 579 aaKnown RBP7.94□□□□□ -1.14
RTN3-208ENST00000537981 LINC00311Q8N616 119 aa7.94□□□□□ -1.14
RTN3-208ENST00000537981 DAZ1Q9NQZ3 744 aaKnown RBP7.94□□□□□ -1.14
RTN3-208ENST00000537981 DAZ3Q9NR90 486 aaKnown RBP7.94□□□□□ -1.14
RTN3-208ENST00000537981 VPS13CQ709C8 3753 aa7.94□□□□□ -1.14
RTN3-208ENST00000537981 USP24Q9UPU5 2620 aa7.93□□□□□ -1.14
RTN3-208ENST00000537981 M0R1W7 72 aa7.93□□□□□ -1.14
RTN3-208ENST00000537981 CCL24O00175 119 aa7.93□□□□□ -1.14
RTN3-208ENST00000537981 RNASE13Q5GAN3 156 aaKnown RBP7.93□□□□□ -1.14
RTN3-208ENST00000537981 CCL17Q92583 94 aa7.93□□□□□ -1.14
RTN3-208ENST00000537981 DPH3P1Q9H4G8 78 aa7.93□□□□□ -1.14
RTN3-208ENST00000537981 SPANXCQ9NY87 97 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms