RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 S100A4P26447 101 aaKnown RBP1.95□□□□□ -2.1
CTR9-204ENST00000529355 GCHFRP30047 84 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 CKS2P33552 79 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 MP68P56378 58 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 HIST1H4AP62805 103 aaKnown RBP1.95□□□□□ -2.1
CTR9-204ENST00000529355 NCBP2-AS2Q69YL0 99 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 PHF5AQ7RTV0 110 aaKnown RBP1.95□□□□□ -2.1
CTR9-204ENST00000529355 C10orf105Q8TEF2 133 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 SPTSSAQ969W0 71 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 ODF3Q96PU9 254 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 PLA2G12AQ9BZM1 189 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 EPDR1Q9UM22 224 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 KLK5Q9Y337 293 aaPredicted RBP1.95□□□□□ -2.1
CTR9-204ENST00000529355 PLXNB2O15031 1838 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 NUP98P52948 1817 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 PTPRSQ13332 1948 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 PRR14LQ5THK1 2151 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 LRP6O75581 1613 aa1.95□□□□□ -2.1
CTR9-204ENST00000529355 MPDZO75970 2070 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.94□□□□□ -2.1
CTR9-204ENST00000529355 LOC389332A0A1B0GUA5 103 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 H3BMM0 161 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 TMEM256-PLSCR3K7ERE1 68 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 M0R378 163 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 M0R381 172 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 LST1O00453 97 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 CCL16O15467 120 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 HCRTO43612 131 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 TIMM17BO60830 172 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 NPYP01303 97 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 SERF2P84101 59 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 ZNF117Q03924 483 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 FBXL19-AS1Q494R0 122 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 DEFB121Q5J5C9 76 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 FAM104BQ5XKR9 115 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 Q6ZQT7 251 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 C3orf56Q8N813 242 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 ZNF563Q8TA94 476 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 DCANP1Q8TF63 244 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 ITLN2Q8WWU7 325 aaPredicted RBP1.94□□□□□ -2.1
CTR9-204ENST00000529355 UBE2WQ96B02 151 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 IFI27L1Q96BM0 104 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 ZC2HC1AQ96GY0 325 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 SPACA5Q96QH8 159 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 UPK3BQ9BT76 320 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 NHP2Q9NX24 153 aaKnown RBP1.94□□□□□ -2.1
CTR9-204ENST00000529355 HHLA3Q9XRX5 114 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 HILPDAQ9Y5L2 63 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 FBN1P35555 2871 aaKnown RBP1.94□□□□□ -2.1
CTR9-204ENST00000529355 TNS1Q9HBL0 1735 aaKnown RBP1.94□□□□□ -2.1
CTR9-204ENST00000529355 COL1A1P02452 1464 aaPredicted RBP1.94□□□□□ -2.1
CTR9-204ENST00000529355 KIAA1549LQ6ZVL6 1849 aa1.94□□□□□ -2.1
CTR9-204ENST00000529355 PCNX2A6NKB5 2137 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 SPTBP11277 2137 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 EML5Q05BV3 1969 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 IGHV3OR15-7A0A075B7D8 119 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 TRAV3A0A0B4J244 114 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 MYMXA0A1B0GTQ4 84 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 A0A1B0GWA3 101 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 TCRBV4S1A1TA0A5B7 111 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 CEBPZOSA8MTT3 80 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 A8MUN3 132 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 COX7A2LO14548 114 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 FFAR1O14842 300 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 SLC25A20O43772 301 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 IGHV1-46P01743 117 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 DYNLT3P51808 116 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 DSCR4P56555 118 aaPredicted RBP1.93□□□□□ -2.1
CTR9-204ENST00000529355 UBE2D3P61077 147 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 UBE2D2P62837 147 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 RPL18Q07020 188 aaKnown RBP1.93□□□□□ -2.1
CTR9-204ENST00000529355 SLC48A1Q6P1K1 146 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 C7orf65Q6ZTY9 151 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 TMEM75Q8N9X5 138 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 TAS2R4Q9NYW5 299 aa1.93□□□□□ -2.1
CTR9-204ENST00000529355 GOLGA4Q13439 2230 aaKnown RBP1.93□□□□□ -2.1
CTR9-204ENST00000529355 COL11A1P12107 1806 aaPredicted RBP1.92□□□□□ -2.1
CTR9-204ENST00000529355 A0A0D9SEW6 157 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 A0A1B0GW54 56 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 CRYM-AS1A6NIL9 109 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 C9JCJ5 164 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 COX7A2P2O60397 106 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 PEBP1P30086 187 aaKnown RBP1.92□□□□□ -2.1
CTR9-204ENST00000529355 FXYD2P54710 66 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 CCL20P78556 96 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 ZNF56Q15929 161 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 CLLU1OSQ5K130 101 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 FP248Q71RG6 208 aaPredicted RBP1.92□□□□□ -2.1
CTR9-204ENST00000529355 PRNTQ86SH4 94 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 Q8N8P6 123 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 DYNLRB2Q8TF09 96 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 ZNF714Q96N38 554 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 CXCL16Q9H2A7 254 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 TIMM9Q9Y5J7 89 aa1.92□□□□□ -2.1
CTR9-204ENST00000529355 MDC1Q14676 2089 aaKnown RBP1.92□□□□□ -2.1
CTR9-204ENST00000529355 LTBP2Q14767 1821 aa1.91□□□□□ -2.1
CTR9-204ENST00000529355 PLXNB1O43157 2135 aa1.91□□□□□ -2.1
CTR9-204ENST00000529355 IGKV1OR2-108A0A075B7D4 117 aa1.91□□□□□ -2.1
CTR9-204ENST00000529355 A0A0B4J2C4 111 aa1.91□□□□□ -2.1
CTR9-204ENST00000529355 TRBV10-2A0A0K0K1G8 114 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms