RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 SPTBP11277 2137 aa1.16□□□□□ -2.22
RNU6-488P-201ENST00000515918 NRXN2Q9P2S2 1712 aa1.16□□□□□ -2.22
RNU6-488P-201ENST00000515918 RBAKDNA6NC62 111 aa1.16□□□□□ -2.22
RNU6-488P-201ENST00000515918 RPL37P61927 97 aaKnown RBP1.16□□□□□ -2.22
RNU6-488P-201ENST00000515918 PPP1R1CQ8WVI7 109 aa1.16□□□□□ -2.22
RNU6-488P-201ENST00000515918 PZPP20742 1482 aa1.16□□□□□ -2.22
RNU6-488P-201ENST00000515918 KIAA0100Q14667 2235 aaKnown RBP1.15□□□□□ -2.23
RNU6-488P-201ENST00000515918 TRBV7-1A0A0A6YYK4 115 aa1.15□□□□□ -2.23
RNU6-488P-201ENST00000515918 TRAV13-2A0A0B4J235 113 aa1.15□□□□□ -2.23
RNU6-488P-201ENST00000515918 SIX6O95475 246 aa1.15□□□□□ -2.23
RNU6-488P-201ENST00000515918 SPINK13Q1W4C9 94 aa1.15□□□□□ -2.23
RNU6-488P-201ENST00000515918 C14orf144Q96I85 54 aa1.15□□□□□ -2.23
RNU6-488P-201ENST00000515918 PPP3R2Q96LZ3 170 aa1.15□□□□□ -2.23
RNU6-488P-201ENST00000515918 C12orf57Q99622 126 aa1.15□□□□□ -2.23
RNU6-488P-201ENST00000515918 LINC00312Q9Y6C7 94 aa1.15□□□□□ -2.23
RNU6-488P-201ENST00000515918 KMT2BQ9UMN6 2715 aaPredicted RBP1.15□□□□□ -2.23
RNU6-488P-201ENST00000515918 CPSF1Q10570 1443 aaKnown RBP1.15□□□□□ -2.23
RNU6-488P-201ENST00000515918 MYH9P35579 1960 aaKnown RBP1.14□□□□□ -2.23
RNU6-488P-201ENST00000515918 ATP6V1G2-DDX39BF2Z307 99 aa1.14□□□□□ -2.23
RNU6-488P-201ENST00000515918 EDDM3BP56851 147 aa1.14□□□□□ -2.23
RNU6-488P-201ENST00000515918 ESPL1Q14674 2120 aa1.14□□□□□ -2.23
RNU6-488P-201ENST00000515918 FAM74A4Q5TZK3 123 aa1.14□□□□□ -2.23
RNU6-488P-201ENST00000515918 Q96NJ1 140 aa1.14□□□□□ -2.23
RNU6-488P-201ENST00000515918 ZDBF2Q9HCK1 2354 aa1.13□□□□□ -2.23
RNU6-488P-201ENST00000515918 PHIPQ8WWQ0 1821 aa1.13□□□□□ -2.23
RNU6-488P-201ENST00000515918 C20orf202A1L168 122 aa1.13□□□□□ -2.23
RNU6-488P-201ENST00000515918 KRTAP21-2Q3LI59 83 aa1.13□□□□□ -2.23
RNU6-488P-201ENST00000515918 C5orf38Q86SI9 138 aa1.13□□□□□ -2.23
RNU6-488P-201ENST00000515918 V9GYV3 84 aa1.13□□□□□ -2.23
RNU6-488P-201ENST00000515918 PLXNA1Q9UIW2 1896 aa1.13□□□□□ -2.23
RNU6-488P-201ENST00000515918 ROBO1Q9Y6N7 1651 aa1.13□□□□□ -2.23
RNU6-488P-201ENST00000515918 PIGBOS1A0A0B4J2F0 54 aa1.12□□□□□ -2.23
RNU6-488P-201ENST00000515918 C8orf59Q8N0T1 100 aaPredicted RBP1.12□□□□□ -2.23
RNU6-488P-201ENST00000515918 SPANXDQ9BXN6 97 aa1.12□□□□□ -2.23
RNU6-488P-201ENST00000515918 ARAP2Q8WZ64 1704 aa1.12□□□□□ -2.23
RNU6-488P-201ENST00000515918 KDM6BO15054 1643 aa1.11□□□□□ -2.23
RNU6-488P-201ENST00000515918 TCEAL7Q9BRU2 100 aa1.11□□□□□ -2.23
RNU6-488P-201ENST00000515918 A0A0D9SG42 100 aa1.1□□□□□ -2.23
RNU6-488P-201ENST00000515918 ZNF137PP52743 207 aa1.1□□□□□ -2.23
RNU6-488P-201ENST00000515918 SPINK9Q5DT21 86 aa1.1□□□□□ -2.23
RNU6-488P-201ENST00000515918 C6orf52Q5T4I8 152 aa1.1□□□□□ -2.23
RNU6-488P-201ENST00000515918 NWD2Q9ULI1 1742 aa1.09□□□□□ -2.23
RNU6-488P-201ENST00000515918 COMMD6Q7Z4G1 85 aa1.09□□□□□ -2.23
RNU6-488P-201ENST00000515918 TSLPQ969D9 159 aa1.09□□□□□ -2.23
RNU6-488P-201ENST00000515918 LINC00474Q9P2X8 69 aa1.09□□□□□ -2.23
RNU6-488P-201ENST00000515918 TRIOBPQ9H2D6 2365 aa1.09□□□□□ -2.23
RNU6-488P-201ENST00000515918 PXDNQ92626 1479 aa1.09□□□□□ -2.24
RNU6-488P-201ENST00000515918 ABCA1O95477 2261 aa1.09□□□□□ -2.24
RNU6-488P-201ENST00000515918 NRKQ7Z2Y5 1582 aa1.08□□□□□ -2.24
RNU6-488P-201ENST00000515918 TRGV1A0A0A0MS02 117 aa1.08□□□□□ -2.24
RNU6-488P-201ENST00000515918 IFITM1P13164 125 aa1.08□□□□□ -2.24
RNU6-488P-201ENST00000515918 PRB3Q04118 309 aaPredicted RBP1.08□□□□□ -2.24
RNU6-488P-201ENST00000515918 C10orf128Q5T292 105 aa1.08□□□□□ -2.24
RNU6-488P-201ENST00000515918 SVBPQ8N300 66 aa1.08□□□□□ -2.24
RNU6-488P-201ENST00000515918 TTC9CQ8N5M4 171 aa1.08□□□□□ -2.24
RNU6-488P-201ENST00000515918 AQP10Q96PS8 301 aa1.08□□□□□ -2.24
RNU6-488P-201ENST00000515918 WFDC6Q9BQY6 131 aa1.08□□□□□ -2.24
RNU6-488P-201ENST00000515918 DPH3P1Q9H4G8 78 aa1.08□□□□□ -2.24
RNU6-488P-201ENST00000515918 MAP2P11137 1827 aaKnown RBP1.08□□□□□ -2.24
RNU6-488P-201ENST00000515918 LRRC37A3O60309 1634 aa1.07□□□□□ -2.24
RNU6-488P-201ENST00000515918 SHROOM2Q13796 1616 aa1.07□□□□□ -2.24
RNU6-488P-201ENST00000515918 PPIP5K1Q6PFW1 1433 aa1.07□□□□□ -2.24
RNU6-488P-201ENST00000515918 GVQW2A0A096LPI5 108 aaPredicted RBP1.07□□□□□ -2.24
RNU6-488P-201ENST00000515918 SSSCA1O60232 199 aa1.07□□□□□ -2.24
RNU6-488P-201ENST00000515918 FXYD6P3P58550 94 aa1.07□□□□□ -2.24
RNU6-488P-201ENST00000515918 HSD52Q0P140 79 aa1.07□□□□□ -2.24
RNU6-488P-201ENST00000515918 GTF2H5Q6ZYL4 71 aa1.07□□□□□ -2.24
RNU6-488P-201ENST00000515918 KNTC1P50748 2209 aa1.07□□□□□ -2.24
RNU6-488P-201ENST00000515918 C10orf71Q711Q0 1435 aa1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 ARFGEF1Q9Y6D6 1849 aa1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 MAPKBP1O60336 1514 aa1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 ZFYVE16Q7Z3T8 1539 aa1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 MED13LQ71F56 2210 aa1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 UBE2L5PA0A1B0GUS4 154 aa1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 FAM24AA6NFZ4 105 aa1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 ACYP2P14621 99 aa1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 RBP2P50120 134 aa1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 UBE2L3P68036 154 aaKnown RBP1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 CYP4F30PQ9H0H9 118 aa1.06□□□□□ -2.24
RNU6-488P-201ENST00000515918 SPINK8P0C7L1 97 aa1.05□□□□□ -2.24
RNU6-488P-201ENST00000515918 SIPA1L3O60292 1781 aaPredicted RBP1.05□□□□□ -2.24
RNU6-488P-201ENST00000515918 PATJQ8NI35 1801 aa1.05□□□□□ -2.24
RNU6-488P-201ENST00000515918 DOCK1Q14185 1865 aa1.05□□□□□ -2.24
RNU6-488P-201ENST00000515918 MRC1P22897 1456 aa1.05□□□□□ -2.24
RNU6-488P-201ENST00000515918 SSC5DA1L4H1 1573 aa1.04□□□□□ -2.24
RNU6-488P-201ENST00000515918 PARP14Q460N5 1801 aa1.04□□□□□ -2.24
RNU6-488P-201ENST00000515918 TANC1Q9C0D5 1861 aa1.04□□□□□ -2.24
RNU6-488P-201ENST00000515918 F2Z2F3 143 aa1.04□□□□□ -2.24
RNU6-488P-201ENST00000515918 PPP1R17O96001 155 aa1.04□□□□□ -2.24
RNU6-488P-201ENST00000515918 CCL18P55774 89 aa1.04□□□□□ -2.24
RNU6-488P-201ENST00000515918 BPESC1Q9GZL8 116 aa1.04□□□□□ -2.24
RNU6-488P-201ENST00000515918 ZMYM4Q5VZL5 1548 aa1.04□□□□□ -2.24
RNU6-488P-201ENST00000515918 TNS1Q9HBL0 1735 aaKnown RBP1.03□□□□□ -2.24
RNU6-488P-201ENST00000515918 TRBV7-3A0A075B6L6 115 aa1.03□□□□□ -2.24
RNU6-488P-201ENST00000515918 SMIM6P0DI80 62 aa1.03□□□□□ -2.24
RNU6-488P-201ENST00000515918 ATP5EP56381 51 aaPredicted RBP1.03□□□□□ -2.24
RNU6-488P-201ENST00000515918 LENEPQ9Y5L5 61 aa1.03□□□□□ -2.24
RNU6-488P-201ENST00000515918 CDK13Q14004 1512 aaKnown RBP1.03□□□□□ -2.24
RNU6-488P-201ENST00000515918 LOC285556D6RIA3 1793 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms