RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
RNU6-488P-201ENST00000515918 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
RNU6-488P-201ENST00000515918 PHF23Q9BUL5 403 aaPredicted RBP14.02□□□□□ -0.17
RNU6-488P-201ENST00000515918 PLPPR3Q6T4P5 718 aa13.03□□□□□ -0.32
RNU6-488P-201ENST00000515918 SENP3Q9H4L4 574 aaPredicted RBP13□□□□□ -0.33
RNU6-488P-201ENST00000515918 ADRA2BP18089 450 aa12.31□□□□□ -0.44
RNU6-488P-201ENST00000515918 PPP6R1Q9UPN7 881 aa12.17□□□□□ -0.46
RNU6-488P-201ENST00000515918 KCNA4P22459 653 aa12.1□□□□□ -0.47
RNU6-488P-201ENST00000515918 FOXD1Q16676 465 aa12.07□□□□□ -0.48
RNU6-488P-201ENST00000515918 EHMT2Q96KQ7 1210 aa11.99□□□□□ -0.49
RNU6-488P-201ENST00000515918 PPP4R3CPQ6ZMV5 832 aa11.62□□□□□ -0.55
RNU6-488P-201ENST00000515918 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
RNU6-488P-201ENST00000515918 SLC4A1APQ9BWU0 796 aaKnown RBP11.58□□□□□ -0.56
RNU6-488P-201ENST00000515918 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
RNU6-488P-201ENST00000515918 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
RNU6-488P-201ENST00000515918 NPM3O75607 178 aaKnown RBP11.34□□□□□ -0.59
RNU6-488P-201ENST00000515918 ZBTB22O15209 634 aa11.2□□□□□ -0.62
RNU6-488P-201ENST00000515918 CNKSR2Q8WXI2 1034 aa11.11□□□□□ -0.63
RNU6-488P-201ENST00000515918 SCAF1Q9H7N4 1312 aaKnown RBP10.99□□□□□ -0.65
RNU6-488P-201ENST00000515918 DNAJC5BQ9UF47 199 aa10.9□□□□□ -0.66
RNU6-488P-201ENST00000515918 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
RNU6-488P-201ENST00000515918 MAPK8IP2Q13387 824 aaPredicted RBP10.87□□□□□ -0.67
RNU6-488P-201ENST00000515918 MSH5O43196 834 aa10.78□□□□□ -0.68
RNU6-488P-201ENST00000515918 RNF216Q9NWF9 866 aaPredicted RBP10.75□□□□□ -0.69
RNU6-488P-201ENST00000515918 RTN4Q9NQC3 1192 aaKnown RBP10.64□□□□□ -0.71
RNU6-488P-201ENST00000515918 SLC4A2P04920 1241 aa10.59□□□□□ -0.71
RNU6-488P-201ENST00000515918 SLC24A1O60721 1099 aa10.58□□□□□ -0.72
RNU6-488P-201ENST00000515918 HOXD11P31277 338 aaPredicted RBP10.56□□□□□ -0.72
RNU6-488P-201ENST00000515918 AMER1Q5JTC6 1135 aaPredicted RBP10.55□□□□□ -0.72
RNU6-488P-201ENST00000515918 DMRT2Q9Y5R5 561 aa10.52□□□□□ -0.73
RNU6-488P-201ENST00000515918 ATXN8OSP0DMR3 200 aa10.44□□□□□ -0.74
RNU6-488P-201ENST00000515918 MYCNP04198 464 aaPredicted RBP10.41□□□□□ -0.74
RNU6-488P-201ENST00000515918 FKBP8Q14318 412 aa10.4□□□□□ -0.74
RNU6-488P-201ENST00000515918 ATF5Q9Y2D1 282 aaPredicted RBP10.2□□□□□ -0.78
RNU6-488P-201ENST00000515918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.81
RNU6-488P-201ENST00000515918 DCAF8L1A6NGE4 600 aa9.98□□□□□ -0.81
RNU6-488P-201ENST00000515918 SAMD1Q6SPF0 538 aaPredicted RBP9.98□□□□□ -0.81
RNU6-488P-201ENST00000515918 U3KPZ7 1027 aaPredicted RBP9.98□□□□□ -0.81
RNU6-488P-201ENST00000515918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.95□□□□□ -0.82
RNU6-488P-201ENST00000515918 HNRNPUL2Q1KMD3 747 aaKnown RBP9.95□□□□□ -0.82
RNU6-488P-201ENST00000515918 ZNF219Q9P2Y4 722 aaPredicted RBP9.88□□□□□ -0.83
RNU6-488P-201ENST00000515918 FBXO3Q9UK99 471 aa9.79□□□□□ -0.84
RNU6-488P-201ENST00000515918 SPDYE4A6NLX3 237 aa9.78□□□□□ -0.84
RNU6-488P-201ENST00000515918 MKRN4PQ13434 485 aaPredicted RBP9.77□□□□□ -0.85
RNU6-488P-201ENST00000515918 PLCB2Q00722 1185 aa9.76□□□□□ -0.85
RNU6-488P-201ENST00000515918 PROM2Q8N271 834 aa9.76□□□□□ -0.85
RNU6-488P-201ENST00000515918 VASPP50552 380 aaPredicted RBP9.7□□□□□ -0.86
RNU6-488P-201ENST00000515918 IFNLR1Q8IU57 520 aaPredicted RBP9.67□□□□□ -0.86
RNU6-488P-201ENST00000515918 APLP2Q06481 763 aa9.66□□□□□ -0.86
RNU6-488P-201ENST00000515918 HAP1P54257 671 aaPredicted RBP9.6□□□□□ -0.87
RNU6-488P-201ENST00000515918 PKD2Q13563 968 aa9.6□□□□□ -0.87
RNU6-488P-201ENST00000515918 FBLN2P98095 1184 aa9.57□□□□□ -0.88
RNU6-488P-201ENST00000515918 DCAF8L2P0C7V8 631 aa9.55□□□□□ -0.88
RNU6-488P-201ENST00000515918 SPINK5Q9NQ38 1064 aaPredicted RBP9.54□□□□□ -0.88
RNU6-488P-201ENST00000515918 POLA2Q14181 598 aa9.53□□□□□ -0.88
RNU6-488P-201ENST00000515918 TRHP20396 242 aaPredicted RBP9.52□□□□□ -0.89
RNU6-488P-201ENST00000515918 PRKCSHP14314 528 aaPredicted RBP9.47□□□□□ -0.89
RNU6-488P-201ENST00000515918 VSIG10Q8N0Z9 540 aa9.47□□□□□ -0.89
RNU6-488P-201ENST00000515918 BCANQ96GW7 911 aa9.47□□□□□ -0.89
RNU6-488P-201ENST00000515918 NPM1P06748 294 aaKnown RBP eCLIP9.41□□□□□ -0.9
RNU6-488P-201ENST00000515918 TAOK2Q9UL54 1235 aa9.41□□□□□ -0.9
RNU6-488P-201ENST00000515918 KDM2AQ9Y2K7 1162 aa9.41□□□□□ -0.9
RNU6-488P-201ENST00000515918 CAPN15O75808 1086 aa9.39□□□□□ -0.91
RNU6-488P-201ENST00000515918 BBXQ8WY36 941 aaPredicted RBP9.38□□□□□ -0.91
RNU6-488P-201ENST00000515918 SPOCK2Q92563 424 aa9.38□□□□□ -0.91
RNU6-488P-201ENST00000515918 RNF39Q9H2S5 420 aa9.37□□□□□ -0.91
RNU6-488P-201ENST00000515918 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
RNU6-488P-201ENST00000515918 KLHL34Q8N239 644 aa9.35□□□□□ -0.91
RNU6-488P-201ENST00000515918 PAXIP1Q6ZW49 1069 aaPredicted RBP9.33□□□□□ -0.92
RNU6-488P-201ENST00000515918 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.33□□□□□ -0.92
RNU6-488P-201ENST00000515918 ZBTB12Q9Y330 459 aaPredicted RBP9.33□□□□□ -0.92
RNU6-488P-201ENST00000515918 ABCB7O75027 752 aa9.31□□□□□ -0.92
RNU6-488P-201ENST00000515918 RGL2O15211 777 aa9.3□□□□□ -0.92
RNU6-488P-201ENST00000515918 CFAP44Q96MT7 982 aa9.29□□□□□ -0.92
RNU6-488P-201ENST00000515918 STAG3Q9UJ98 1225 aa9.27□□□□□ -0.93
RNU6-488P-201ENST00000515918 TPRNQ4KMQ1 711 aa9.26□□□□□ -0.93
RNU6-488P-201ENST00000515918 ZNF692Q9BU19 519 aaPredicted RBP9.25□□□□□ -0.93
RNU6-488P-201ENST00000515918 C1QBPQ07021 282 aaKnown RBP9.24□□□□□ -0.93
RNU6-488P-201ENST00000515918 TSHZ2Q9NRE2 1034 aa9.24□□□□□ -0.93
RNU6-488P-201ENST00000515918 PLCD3Q8N3E9 789 aa9.22□□□□□ -0.93
RNU6-488P-201ENST00000515918 SSUH2Q9Y2M2 353 aa9.22□□□□□ -0.93
RNU6-488P-201ENST00000515918 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.94
RNU6-488P-201ENST00000515918 MIER1Q8N108 512 aa9.19□□□□□ -0.94
RNU6-488P-201ENST00000515918 SPDYE2BA6NHP3 402 aa9.17□□□□□ -0.94
RNU6-488P-201ENST00000515918 SPDYE6P0CI01 402 aa9.17□□□□□ -0.94
RNU6-488P-201ENST00000515918 SPDYE2Q495Y8 402 aa9.17□□□□□ -0.94
RNU6-488P-201ENST00000515918 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
RNU6-488P-201ENST00000515918 OSCARQ8IYS5 282 aa9.17□□□□□ -0.94
RNU6-488P-201ENST00000515918 CHGAP10645 457 aaKnown RBP9.14□□□□□ -0.95
RNU6-488P-201ENST00000515918 DSG3P32926 999 aa9.14□□□□□ -0.95
RNU6-488P-201ENST00000515918 DNAJC5Q9H3Z4 198 aa9.12□□□□□ -0.95
RNU6-488P-201ENST00000515918 CIZ1Q9ULV3 898 aaPredicted RBP9.12□□□□□ -0.95
RNU6-488P-201ENST00000515918 HS6ST3Q8IZP7 471 aa9.05□□□□□ -0.96
RNU6-488P-201ENST00000515918 RNF25Q96BH1 459 aaPredicted RBP9.03□□□□□ -0.96
RNU6-488P-201ENST00000515918 TRIM41Q8WV44 630 aa9.02□□□□□ -0.97
RNU6-488P-201ENST00000515918 ZBTB47Q9UFB7 747 aaPredicted RBP9.02□□□□□ -0.97
RNU6-488P-201ENST00000515918 PLEKHG5O94827 1062 aa8.99□□□□□ -0.97
RNU6-488P-201ENST00000515918 NKX1-1Q15270 411 aaPredicted RBP8.99□□□□□ -0.97
RNU6-488P-201ENST00000515918 NBR1Q14596 966 aa8.97□□□□□ -0.97
RNU6-488P-201ENST00000515918 NUBP1P53384 320 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms