RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 GAGE1Q13065 139 aa4.99□□□□□ -1.61
GYPB-206ENST00000506516 GAGE4Q13068 117 aa4.99□□□□□ -1.61
GYPB-206ENST00000506516 GAGE5Q13069 117 aa4.99□□□□□ -1.61
GYPB-206ENST00000506516 ZNF56Q15929 161 aa4.99□□□□□ -1.61
GYPB-206ENST00000506516 LYZL1Q6UWQ5 148 aa4.99□□□□□ -1.61
GYPB-206ENST00000506516 Q6ZR54 194 aa4.99□□□□□ -1.61
GYPB-206ENST00000506516 LINC01551Q86U37 167 aa4.99□□□□□ -1.61
GYPB-206ENST00000506516 C15orf54Q8N8G6 183 aa4.99□□□□□ -1.61
GYPB-206ENST00000506516 RPL36ALQ969Q0 106 aaKnown RBP4.99□□□□□ -1.61
GYPB-206ENST00000506516 AP1S3Q96PC3 154 aa4.99□□□□□ -1.61
GYPB-206ENST00000506516 GTSF1LQ9H1H1 148 aa4.99□□□□□ -1.61
GYPB-206ENST00000506516 A0A087WWC5 75 aa4.98□□□□□ -1.61
GYPB-206ENST00000506516 C9JQL5 133 aa4.98□□□□□ -1.61
GYPB-206ENST00000506516 K7EP13 123 aa4.98□□□□□ -1.61
GYPB-206ENST00000506516 BTF3P20290 206 aaKnown RBP4.98□□□□□ -1.61
GYPB-206ENST00000506516 NTF3P20783 257 aa4.98□□□□□ -1.61
GYPB-206ENST00000506516 EVI2AP22794 236 aa4.98□□□□□ -1.61
GYPB-206ENST00000506516 TWIST1Q15672 202 aa4.98□□□□□ -1.61
GYPB-206ENST00000506516 OR10J3Q5JRS4 329 aa4.98□□□□□ -1.61
GYPB-206ENST00000506516 SMIM15Q7Z3B0 74 aa4.98□□□□□ -1.61
GYPB-206ENST00000506516 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.98□□□□□ -1.61
GYPB-206ENST00000506516 BORCS7Q96B45 105 aa4.98□□□□□ -1.61
GYPB-206ENST00000506516 OSTCQ9NRP0 149 aa4.98□□□□□ -1.61
GYPB-206ENST00000506516 NAT8Q9UHE5 227 aa4.98□□□□□ -1.61
GYPB-206ENST00000506516 DNAH6Q9C0G6 4158 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 DNAH10Q8IVF4 4471 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 MUC4Q99102 2169 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 TRBV7-3A0A075B6L6 115 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 FAM231BA6NCW3 169 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 H7C1H1 209 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 CTRLP40313 264 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 FOXA3P55318 350 aaPredicted RBP4.97□□□□□ -1.61
GYPB-206ENST00000506516 RPL23P62829 140 aaKnown RBP4.97□□□□□ -1.61
GYPB-206ENST00000506516 ADIRFQ15847 76 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 CLLU1Q5K131 121 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 LELP1Q5T871 98 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 C6orf223Q8N319 242 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 TSKUQ8WUA8 353 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 DPH3P1Q9H4G8 78 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 MSRB1Q9NZV6 116 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 KIF25-AS1Q9Y6Z4 181 aa4.97□□□□□ -1.61
GYPB-206ENST00000506516 EPPK1P58107 5090 aaKnown RBP4.96□□□□□ -1.61
GYPB-206ENST00000506516 IGHV3-38A0A0C4DH36 116 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 PRSS29PA6NIE9 313 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 MGPP08493 103 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 C10orf126Q8N4M7 172 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 OR10G8Q8NGN5 311 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 GTSF1Q8WW33 167 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 ISOC2Q96AB3 205 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 PGLYRP4Q96LB8 373 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 CNFNQ9BYD5 112 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 GFRA4Q9GZZ7 299 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 Q9UF83 564 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 TNFRSF18Q9Y5U5 241 aa4.96□□□□□ -1.62
GYPB-206ENST00000506516 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 RTL8CO15255 209 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 DNAH10OSP0CZ25 163 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 LINC00694P0DN24 101 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 GCSHP23434 173 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 LINC00315P59091 139 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 UBE2D3P61077 147 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 UBE2D2P62837 147 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 TMEM97Q5BJF2 176 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 KCNIP4Q6PIL6 250 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 NFE4Q86UQ8 179 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 WFDC10BQ8IUB3 73 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 NEXN-AS1Q8NBZ9 246 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 DNAJC30Q96LL9 226 aa4.95□□□□□ -1.62
GYPB-206ENST00000506516 A0A1B0GUT8 65 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 HIGD1CA8MV81 97 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 M0QY20 66 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 IFITM2Q01629 132 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 PNRC1Q12796 327 aaPredicted RBP4.94□□□□□ -1.62
GYPB-206ENST00000506516 RIGQ13278 110 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 LINC01556Q5JQF7 62 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 SUMO4Q6EEV6 95 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 RASL11AQ6T310 242 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 DAZ4Q86SG3 579 aaKnown RBP4.94□□□□□ -1.62
GYPB-206ENST00000506516 FRZBQ92765 325 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 NIT2Q9NQR4 276 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 DAZ3Q9NR90 486 aaKnown RBP4.94□□□□□ -1.62
GYPB-206ENST00000506516 NAT8BQ9UHF3 227 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 URGCP-MRPS24S4R325 110 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 V9GYV3 84 aa4.94□□□□□ -1.62
GYPB-206ENST00000506516 DNAH17Q9UFH2 4485 aa4.93□□□□□ -1.62
GYPB-206ENST00000506516 A0A087WX48 190 aa4.93□□□□□ -1.62
GYPB-206ENST00000506516 TMEM262E9PQX1 116 aa4.93□□□□□ -1.62
GYPB-206ENST00000506516 PPP1R2P9O14990 202 aa4.93□□□□□ -1.62
GYPB-206ENST00000506516 UQCC3Q6UW78 93 aa4.93□□□□□ -1.62
GYPB-206ENST00000506516 NUP35Q8NFH5 326 aa4.93□□□□□ -1.62
GYPB-206ENST00000506516 KRTAP1-5Q9BYS1 174 aa4.93□□□□□ -1.62
GYPB-206ENST00000506516 FRAS1Q86XX4 4008 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 NACAE9PAV3 2078 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 TRBV6-8A0A0A6YYG3 113 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 A0A1B0GW15 77 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 SMIM27A0A1W2PRY6 76 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 IBA57-AS1B1ANH7 110 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 IGHV3-30P01768 117 aa4.92□□□□□ -1.62
GYPB-206ENST00000506516 IGHV3-33P01772 117 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms