RNA–Protein interactions for RNA: ENST00000504994.1

HERC3-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-209ENST00000504994 DOCK1Q14185 1865 aa1.58□□□□□ -2.16
HERC3-209ENST00000504994 LAMA4Q16363 1823 aa1.57□□□□□ -2.16
HERC3-209ENST00000504994 KIAA0100Q14667 2235 aaKnown RBP1.57□□□□□ -2.16
HERC3-209ENST00000504994 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.57□□□□□ -2.16
HERC3-209ENST00000504994 COX7B2Q8TF08 81 aa1.57□□□□□ -2.16
HERC3-209ENST00000504994 COA4Q9NYJ1 87 aa1.57□□□□□ -2.16
HERC3-209ENST00000504994 NWD2Q9ULI1 1742 aa1.57□□□□□ -2.16
HERC3-209ENST00000504994 A0A087WTM6 91 aa1.56□□□□□ -2.16
HERC3-209ENST00000504994 TRAV13-2A0A0B4J235 113 aa1.56□□□□□ -2.16
HERC3-209ENST00000504994 ZNF818PQ6ZRF7 136 aa1.56□□□□□ -2.16
HERC3-209ENST00000504994 C8orf59Q8N0T1 100 aaPredicted RBP1.56□□□□□ -2.16
HERC3-209ENST00000504994 LINC00312Q9Y6C7 94 aa1.56□□□□□ -2.16
HERC3-209ENST00000504994 PIGBOS1A0A0B4J2F0 54 aa1.55□□□□□ -2.16
HERC3-209ENST00000504994 SIX6O95475 246 aa1.55□□□□□ -2.16
HERC3-209ENST00000504994 RBP2P50120 134 aa1.55□□□□□ -2.16
HERC3-209ENST00000504994 SSBP1Q04837 148 aaKnown RBP1.55□□□□□ -2.16
HERC3-209ENST00000504994 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
HERC3-209ENST00000504994 C5orf38Q86SI9 138 aa1.55□□□□□ -2.16
HERC3-209ENST00000504994 TMEM14BQ9NUH8 114 aa1.55□□□□□ -2.16
HERC3-209ENST00000504994 CASKIN1Q8WXD9 1431 aa1.55□□□□□ -2.16
HERC3-209ENST00000504994 ROS1P08922 2347 aa1.54□□□□□ -2.16
HERC3-209ENST00000504994 LY6G6CO95867 125 aa1.54□□□□□ -2.16
HERC3-209ENST00000504994 SMIM6P0DI80 62 aa1.54□□□□□ -2.16
HERC3-209ENST00000504994 ARL14EPLP0DKL9 152 aa1.54□□□□□ -2.16
HERC3-209ENST00000504994 IFITM1P13164 125 aa1.54□□□□□ -2.16
HERC3-209ENST00000504994 HSD52Q0P140 79 aa1.54□□□□□ -2.16
HERC3-209ENST00000504994 GTF2H5Q6ZYL4 71 aa1.54□□□□□ -2.16
HERC3-209ENST00000504994 C4orf33Q8N1A6 199 aa1.54□□□□□ -2.16
HERC3-209ENST00000504994 SVBPQ8N300 66 aa1.54□□□□□ -2.16
HERC3-209ENST00000504994 PPP1R1CQ8WVI7 109 aa1.54□□□□□ -2.16
HERC3-209ENST00000504994 SPANXDQ9BXN6 97 aa1.54□□□□□ -2.16
HERC3-209ENST00000504994 CPSF1Q10570 1443 aaKnown RBP1.54□□□□□ -2.16
HERC3-209ENST00000504994 TRBV7-1A0A0A6YYK4 115 aa1.53□□□□□ -2.16
HERC3-209ENST00000504994 RBAKDNA6NC62 111 aa1.53□□□□□ -2.16
HERC3-209ENST00000504994 MUC6Q6W4X9 2439 aa1.53□□□□□ -2.16
HERC3-209ENST00000504994 CNTRLQ7Z7A1 2325 aa1.53□□□□□ -2.16
HERC3-209ENST00000504994 KDM6BO15054 1643 aa1.52□□□□□ -2.17
HERC3-209ENST00000504994 DPH3P1Q9H4G8 78 aa1.52□□□□□ -2.17
HERC3-209ENST00000504994 NRKQ7Z2Y5 1582 aa1.51□□□□□ -2.17
HERC3-209ENST00000504994 FAM24AA6NFZ4 105 aa1.51□□□□□ -2.17
HERC3-209ENST00000504994 K7EIL1 84 aa1.51□□□□□ -2.17
HERC3-209ENST00000504994 SPINK8P0C7L1 97 aa1.51□□□□□ -2.17
HERC3-209ENST00000504994 FAM74A4Q5TZK3 123 aa1.51□□□□□ -2.17
HERC3-209ENST00000504994 LINC00474Q9P2X8 69 aa1.51□□□□□ -2.17
HERC3-209ENST00000504994 V9GYV3 84 aa1.51□□□□□ -2.17
HERC3-209ENST00000504994 DOCK2Q92608 1830 aa1.51□□□□□ -2.17
HERC3-209ENST00000504994 S100A8P05109 93 aa1.5□□□□□ -2.17
HERC3-209ENST00000504994 EDDM3BP56851 147 aa1.5□□□□□ -2.17
HERC3-209ENST00000504994 COMMD6Q7Z4G1 85 aa1.5□□□□□ -2.17
HERC3-209ENST00000504994 MED13LQ71F56 2210 aa1.5□□□□□ -2.17
HERC3-209ENST00000504994 MAP2P11137 1827 aaKnown RBP1.5□□□□□ -2.17
HERC3-209ENST00000504994 TMEM218A2RU14 115 aa1.49□□□□□ -2.17
HERC3-209ENST00000504994 SSSCA1O60232 199 aa1.49□□□□□ -2.17
HERC3-209ENST00000504994 C10orf128Q5T292 105 aa1.49□□□□□ -2.17
HERC3-209ENST00000504994 Q96NJ1 140 aa1.49□□□□□ -2.17
HERC3-209ENST00000504994 AQP10Q96PS8 301 aa1.49□□□□□ -2.17
HERC3-209ENST00000504994 MAPKBP1O60336 1514 aa1.49□□□□□ -2.17
HERC3-209ENST00000504994 ZFYVE16Q7Z3T8 1539 aa1.49□□□□□ -2.17
HERC3-209ENST00000504994 LOC285556D6RIA3 1793 aa1.49□□□□□ -2.17
HERC3-209ENST00000504994 CCNB3Q8WWL7 1395 aa1.48□□□□□ -2.17
HERC3-209ENST00000504994 A0A096LNT2 108 aa1.48□□□□□ -2.17
HERC3-209ENST00000504994 UBE2L5PA0A1B0GUS4 154 aa1.48□□□□□ -2.17
HERC3-209ENST00000504994 UBE2L3P68036 154 aaKnown RBP1.48□□□□□ -2.17
HERC3-209ENST00000504994 TTC9CQ8N5M4 171 aa1.48□□□□□ -2.17
HERC3-209ENST00000504994 ACBD7Q8N6N7 88 aa1.48□□□□□ -2.17
HERC3-209ENST00000504994 TSLPQ969D9 159 aa1.48□□□□□ -2.17
HERC3-209ENST00000504994 TNS1Q9HBL0 1735 aaKnown RBP1.48□□□□□ -2.17
HERC3-209ENST00000504994 SMARCA2P51531 1590 aa1.47□□□□□ -2.17
HERC3-209ENST00000504994 TRAV30A0A087WSZ9 112 aa1.47□□□□□ -2.17
HERC3-209ENST00000504994 SPINT3P49223 89 aa1.47□□□□□ -2.17
HERC3-209ENST00000504994 RPL37P61927 97 aaKnown RBP1.47□□□□□ -2.17
HERC3-209ENST00000504994 SPINK13Q1W4C9 94 aa1.47□□□□□ -2.17
HERC3-209ENST00000504994 PSME4Q14997 1843 aa1.47□□□□□ -2.17
HERC3-209ENST00000504994 ABCA1O95477 2261 aa1.46□□□□□ -2.18
HERC3-209ENST00000504994 M0R143 59 aa1.46□□□□□ -2.18
HERC3-209ENST00000504994 CYP4F30PQ9H0H9 118 aa1.46□□□□□ -2.18
HERC3-209ENST00000504994 PPIP5K1Q6PFW1 1433 aa1.46□□□□□ -2.18
HERC3-209ENST00000504994 DOCK11Q5JSL3 2073 aa1.46□□□□□ -2.18
HERC3-209ENST00000504994 TANC1Q9C0D5 1861 aa1.46□□□□□ -2.18
HERC3-209ENST00000504994 SIPA1L3O60292 1781 aaPredicted RBP1.45□□□□□ -2.18
HERC3-209ENST00000504994 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
HERC3-209ENST00000504994 DCDP81605 110 aaKnown RBP1.45□□□□□ -2.18
HERC3-209ENST00000504994 SPHKAPQ2M3C7 1700 aa1.45□□□□□ -2.18
HERC3-209ENST00000504994 SHROOM2Q13796 1616 aa1.44□□□□□ -2.18
HERC3-209ENST00000504994 MRC2Q9UBG0 1479 aa1.44□□□□□ -2.18
HERC3-209ENST00000504994 C10orf71Q711Q0 1435 aa1.44□□□□□ -2.18
HERC3-209ENST00000504994 PKIAP61925 76 aa1.44□□□□□ -2.18
HERC3-209ENST00000504994 NCMAPQ5T1S8 102 aa1.44□□□□□ -2.18
HERC3-209ENST00000504994 WFDC6Q9BQY6 131 aa1.44□□□□□ -2.18
HERC3-209ENST00000504994 LRRC37A3O60309 1634 aa1.44□□□□□ -2.18
HERC3-209ENST00000504994 PRDM2Q13029 1718 aa1.43□□□□□ -2.18
HERC3-209ENST00000504994 CNTLNQ9NXG0 1405 aa1.43□□□□□ -2.18
HERC3-209ENST00000504994 TCHHQ07283 1943 aa1.43□□□□□ -2.18
HERC3-209ENST00000504994 TRGV1A0A0A0MS02 117 aa1.43□□□□□ -2.18
HERC3-209ENST00000504994 TMEM262E9PQX1 116 aa1.43□□□□□ -2.18
HERC3-209ENST00000504994 PPP1R17O96001 155 aa1.43□□□□□ -2.18
HERC3-209ENST00000504994 ATP5EP56381 51 aaPredicted RBP1.43□□□□□ -2.18
HERC3-209ENST00000504994 S100A10P60903 97 aa1.43□□□□□ -2.18
HERC3-209ENST00000504994 ZDBF2Q9HCK1 2354 aa1.43□□□□□ -2.18
HERC3-209ENST00000504994 CC2D2AQ9P2K1 1620 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms