RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 Q56UQ5 140 aa0.78□□□□□ -2.28
CLTC-208ENST00000496076 ZNF818PQ6ZRF7 136 aa0.78□□□□□ -2.28
CLTC-208ENST00000496076 BPESC1Q9GZL8 116 aa0.78□□□□□ -2.28
CLTC-208ENST00000496076 CASKIN1Q8WXD9 1431 aa0.78□□□□□ -2.28
CLTC-208ENST00000496076 MYH7P12883 1935 aa0.77□□□□□ -2.29
CLTC-208ENST00000496076 KNTC1P50748 2209 aa0.77□□□□□ -2.29
CLTC-208ENST00000496076 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
CLTC-208ENST00000496076 TRAV13-2A0A0B4J235 113 aa0.77□□□□□ -2.29
CLTC-208ENST00000496076 LINC00587B1AMM8 73 aa0.77□□□□□ -2.29
CLTC-208ENST00000496076 CCL8P80075 99 aa0.77□□□□□ -2.29
CLTC-208ENST00000496076 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.77□□□□□ -2.29
CLTC-208ENST00000496076 PP6455Q8WZ26 134 aa0.77□□□□□ -2.29
CLTC-208ENST00000496076 SCN3BQ9NY72 215 aa0.77□□□□□ -2.29
CLTC-208ENST00000496076 IFT140Q96RY7 1462 aa0.77□□□□□ -2.29
CLTC-208ENST00000496076 ABCA1O95477 2261 aa0.77□□□□□ -2.29
CLTC-208ENST00000496076 ZNF462Q96JM2 2506 aa0.77□□□□□ -2.29
CLTC-208ENST00000496076 GVQW2A0A096LPI5 108 aaPredicted RBP0.76□□□□□ -2.29
CLTC-208ENST00000496076 APOC2P02655 101 aa0.76□□□□□ -2.29
CLTC-208ENST00000496076 BTG2P78543 158 aa0.76□□□□□ -2.29
CLTC-208ENST00000496076 C12orf73Q69YU5 71 aa0.76□□□□□ -2.29
CLTC-208ENST00000496076 KRTAP19-3Q7Z4W3 81 aa0.76□□□□□ -2.29
CLTC-208ENST00000496076 SMIM11BQ8TCY0 68 aa0.76□□□□□ -2.29
CLTC-208ENST00000496076 PRR15LQ9BU68 103 aa0.76□□□□□ -2.29
CLTC-208ENST00000496076 TANC1Q9C0D5 1861 aa0.75□□□□□ -2.29
CLTC-208ENST00000496076 PLXNA1Q9UIW2 1896 aa0.75□□□□□ -2.29
CLTC-208ENST00000496076 TNS1Q9HBL0 1735 aaKnown RBP0.75□□□□□ -2.29
CLTC-208ENST00000496076 C10orf128Q5T292 105 aa0.75□□□□□ -2.29
CLTC-208ENST00000496076 AQP10Q96PS8 301 aa0.75□□□□□ -2.29
CLTC-208ENST00000496076 ARFGEF1Q9Y6D6 1849 aa0.75□□□□□ -2.29
CLTC-208ENST00000496076 FBN2P35556 2912 aa0.74□□□□□ -2.29
CLTC-208ENST00000496076 MAP2P11137 1827 aaKnown RBP0.74□□□□□ -2.29
CLTC-208ENST00000496076 TRAV1-2A0A0B4J238 106 aa0.74□□□□□ -2.29
CLTC-208ENST00000496076 SIX6O95475 246 aa0.74□□□□□ -2.29
CLTC-208ENST00000496076 MRPL54Q6P161 138 aaKnown RBP0.74□□□□□ -2.29
CLTC-208ENST00000496076 PPP3R2Q96LZ3 170 aa0.74□□□□□ -2.29
CLTC-208ENST00000496076 C2orf88Q9BSF0 95 aa0.74□□□□□ -2.29
CLTC-208ENST00000496076 GNG8Q9UK08 70 aa0.74□□□□□ -2.29
CLTC-208ENST00000496076 ASH1LQ9NR48 2969 aaKnown RBP0.74□□□□□ -2.29
CLTC-208ENST00000496076 PARP14Q460N5 1801 aa0.73□□□□□ -2.29
CLTC-208ENST00000496076 ARAP2Q8WZ64 1704 aa0.73□□□□□ -2.29
CLTC-208ENST00000496076 S100A1P23297 94 aa0.73□□□□□ -2.29
CLTC-208ENST00000496076 TTC9CQ8N5M4 171 aa0.73□□□□□ -2.29
CLTC-208ENST00000496076 MYH9P35579 1960 aaKnown RBP0.73□□□□□ -2.29
CLTC-208ENST00000496076 NOTCH1P46531 2555 aa0.73□□□□□ -2.29
CLTC-208ENST00000496076 CDK13Q14004 1512 aaKnown RBP0.73□□□□□ -2.29
CLTC-208ENST00000496076 NWD2Q9ULI1 1742 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 MED13LQ71F56 2210 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 TMEM14DPA8MWL7 114 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 OOSP1A8MZH6 123 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 F6UZH7 168 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 PPP1R17O96001 155 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 IFNGP01579 166 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 SMIM6P0DI80 62 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 GCHFRP30047 84 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 TPPP2P59282 170 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 C9orf153Q5TBE3 101 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 Q6ZRX8 168 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 VMO1Q7Z5L0 202 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 WFDC6Q9BQY6 131 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 SCP2D1Q9UJQ7 156 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 NALCNQ8IZF0 1738 aa0.72□□□□□ -2.29
CLTC-208ENST00000496076 KIAA0100Q14667 2235 aaKnown RBP0.72□□□□□ -2.29
CLTC-208ENST00000496076 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
CLTC-208ENST00000496076 KTN1Q86UP2 1357 aaKnown RBP0.71□□□□□ -2.3
CLTC-208ENST00000496076 SSC5DA1L4H1 1573 aa0.7□□□□□ -2.3
CLTC-208ENST00000496076 A2ML1A8K2U0 1454 aa0.7□□□□□ -2.3
CLTC-208ENST00000496076 BCL9LQ86UU0 1499 aa0.7□□□□□ -2.3
CLTC-208ENST00000496076 TSLPQ969D9 159 aa0.7□□□□□ -2.3
CLTC-208ENST00000496076 TMEM203Q969S6 136 aa0.7□□□□□ -2.3
CLTC-208ENST00000496076 F5P12259 2224 aa0.7□□□□□ -2.3
CLTC-208ENST00000496076 KDM6BO15054 1643 aa0.7□□□□□ -2.3
CLTC-208ENST00000496076 CPSF1Q10570 1443 aaKnown RBP0.7□□□□□ -2.3
CLTC-208ENST00000496076 SMG6Q86US8 1419 aaKnown RBP0.7□□□□□ -2.3
CLTC-208ENST00000496076 CORTO00230 105 aa0.69□□□□□ -2.3
CLTC-208ENST00000496076 NMBP08949 121 aa0.69□□□□□ -2.3
CLTC-208ENST00000496076 BAGE3Q86Y29 109 aa0.69□□□□□ -2.3
CLTC-208ENST00000496076 C8orf59Q8N0T1 100 aaPredicted RBP0.69□□□□□ -2.3
CLTC-208ENST00000496076 PLAC8Q9NZF1 115 aa0.69□□□□□ -2.3
CLTC-208ENST00000496076 ZMYM4Q5VZL5 1548 aa0.69□□□□□ -2.3
CLTC-208ENST00000496076 LRRC37A3O60309 1634 aa0.68□□□□□ -2.3
CLTC-208ENST00000496076 TNFP01375 233 aa0.68□□□□□ -2.3
CLTC-208ENST00000496076 GNG4P50150 75 aa0.68□□□□□ -2.3
CLTC-208ENST00000496076 CCL18P55774 89 aa0.68□□□□□ -2.3
CLTC-208ENST00000496076 PPP3R1P63098 170 aa0.68□□□□□ -2.3
CLTC-208ENST00000496076 PPIP5K1Q6PFW1 1433 aa0.68□□□□□ -2.3
CLTC-208ENST00000496076 C5orf38Q86SI9 138 aa0.68□□□□□ -2.3
CLTC-208ENST00000496076 R4GMQ9 66 aa0.68□□□□□ -2.3
CLTC-208ENST00000496076 CUL7Q14999 1698 aa0.68□□□□□ -2.3
CLTC-208ENST00000496076 QRICH2Q9H0J4 1663 aa0.68□□□□□ -2.3
CLTC-208ENST00000496076 MRC1P22897 1456 aa0.67□□□□□ -2.3
CLTC-208ENST00000496076 MYOM2P54296 1465 aa0.67□□□□□ -2.3
CLTC-208ENST00000496076 GOLGA3Q08378 1498 aa0.67□□□□□ -2.3
CLTC-208ENST00000496076 NCOA3Q9Y6Q9 1424 aa0.67□□□□□ -2.3
CLTC-208ENST00000496076 SPAG11BQ08648 103 aa0.67□□□□□ -2.3
CLTC-208ENST00000496076 CFAP126Q5VTH2 177 aa0.67□□□□□ -2.3
CLTC-208ENST00000496076 SPAG11AQ6PDA7 123 aa0.67□□□□□ -2.3
CLTC-208ENST00000496076 SPANXDQ9BXN6 97 aa0.67□□□□□ -2.3
CLTC-208ENST00000496076 PROK2Q9HC23 129 aa0.67□□□□□ -2.3
CLTC-208ENST00000496076 NPVFQ9HCQ7 196 aa0.67□□□□□ -2.3
CLTC-208ENST00000496076 V9GYH0 126 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms