RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ODF3Q96PU9 254 aa5.95□□□□□ -1.46
BRCA1-221ENST00000493795 SEC16AO15027 2179 aa5.95□□□□□ -1.46
BRCA1-221ENST00000493795 MRPS12O15235 138 aaKnown RBP5.95□□□□□ -1.46
BRCA1-221ENST00000493795 NEXN-AS1Q8NBZ9 246 aa5.95□□□□□ -1.46
BRCA1-221ENST00000493795 CACNA1DQ01668 2161 aa5.95□□□□□ -1.46
BRCA1-221ENST00000493795 M0R378 163 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 RSPO1Q2MKA7 263 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-221ENST00000493795 Q6ZTI0 123 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 SLX1AQ9BQ83 275 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 TNS1Q9HBL0 1735 aaKnown RBP5.94□□□□□ -1.46
BRCA1-221ENST00000493795 DEFB131BA0A096LNP1 70 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 C19orf71A6NCJ1 209 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 LRRC37AA6NMS7 1700 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 NRXN2Q9P2S2 1712 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 PARP14Q460N5 1801 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 XAGE1AQ9HD64 81 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 YLPM1P49750 1951 aaKnown RBP5.94□□□□□ -1.46
BRCA1-221ENST00000493795 CDKN2A-AS1Q9UH64 79 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-221ENST00000493795 DEFB1P60022 68 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 EBI3Q14213 229 aa5.94□□□□□ -1.46
BRCA1-221ENST00000493795 ZNF22P17026 224 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-221ENST00000493795 IGKV2-28A0A075B6P5 120 aa5.93□□□□□ -1.46
BRCA1-221ENST00000493795 A0A1B0GXF2 115 aa5.93□□□□□ -1.46
BRCA1-221ENST00000493795 IGKV2D-28P01615 120 aa5.93□□□□□ -1.46
BRCA1-221ENST00000493795 SCN5AQ14524 2016 aa5.93□□□□□ -1.46
BRCA1-221ENST00000493795 RTTNQ86VV8 2226 aa5.93□□□□□ -1.46
BRCA1-221ENST00000493795 IGLV9-49A0A0B4J1Y8 123 aa5.93□□□□□ -1.46
BRCA1-221ENST00000493795 TRBV6-5A0A0K0K1A5 114 aa5.93□□□□□ -1.46
BRCA1-221ENST00000493795 CCDC179H3BU77 68 aa5.93□□□□□ -1.46
BRCA1-221ENST00000493795 ODF3L1Q8IXM7 274 aa5.93□□□□□ -1.46
BRCA1-221ENST00000493795 TP53TG3Q9ULZ0 132 aa5.93□□□□□ -1.46
BRCA1-221ENST00000493795 COL24A1Q17RW2 1714 aa5.93□□□□□ -1.46
BRCA1-221ENST00000493795 TRBV7-6A0A0J9YX20 115 aa5.92□□□□□ -1.46
BRCA1-221ENST00000493795 SPRNQ5BIV9 151 aa5.92□□□□□ -1.46
BRCA1-221ENST00000493795 Q6JHZ5 121 aa5.92□□□□□ -1.46
BRCA1-221ENST00000493795 Q6ZQY7 126 aa5.92□□□□□ -1.46
BRCA1-221ENST00000493795 RALGAPA2Q2PPJ7 1873 aa5.92□□□□□ -1.46
BRCA1-221ENST00000493795 NYNRINQ9P2P1 1898 aaKnown RBP5.92□□□□□ -1.46
BRCA1-221ENST00000493795 KMT2EQ8IZD2 1858 aa5.92□□□□□ -1.46
BRCA1-221ENST00000493795 IGLV4-3A0A075B6K6 122 aa5.92□□□□□ -1.46
BRCA1-221ENST00000493795 GRNP28799 593 aaKnown RBP5.92□□□□□ -1.46
BRCA1-221ENST00000493795 LINC00694P0DN24 101 aa5.91□□□□□ -1.46
BRCA1-221ENST00000493795 ESRGQ1W209 222 aa5.91□□□□□ -1.46
BRCA1-221ENST00000493795 UNQ9165/PRO28630Q6UXU0 137 aa5.91□□□□□ -1.46
BRCA1-221ENST00000493795 TAF1LQ8IZX4 1826 aa5.91□□□□□ -1.46
BRCA1-221ENST00000493795 LOC107984640A0A0U1RRK4 108 aa5.91□□□□□ -1.46
BRCA1-221ENST00000493795 X6R8D5 127 aa5.91□□□□□ -1.46
BRCA1-221ENST00000493795 TRBV6-8A0A0A6YYG3 113 aa5.91□□□□□ -1.46
BRCA1-221ENST00000493795 PLAC8L1A1L4L8 177 aa5.91□□□□□ -1.46
BRCA1-221ENST00000493795 C10orf25Q5T742 122 aa5.91□□□□□ -1.46
BRCA1-221ENST00000493795 Q6Q795 121 aa5.91□□□□□ -1.46
BRCA1-221ENST00000493795 HEATR1Q9H583 2144 aaKnown RBP5.91□□□□□ -1.46
BRCA1-221ENST00000493795 DOCK11Q5JSL3 2073 aa5.9□□□□□ -1.46
BRCA1-221ENST00000493795 A0A0G2JMZ2 1700 aa5.9□□□□□ -1.46
BRCA1-221ENST00000493795 LRRC37A2A6NM11 1700 aa5.9□□□□□ -1.46
BRCA1-221ENST00000493795 INTS1Q8N201 2190 aaKnown RBP5.9□□□□□ -1.46
BRCA1-221ENST00000493795 A6NDX4 124 aa5.9□□□□□ -1.46
BRCA1-221ENST00000493795 ZFP36P26651 326 aaKnown RBP5.9□□□□□ -1.46
BRCA1-221ENST00000493795 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-221ENST00000493795 C22orf34Q6ZV56 151 aa5.9□□□□□ -1.46
BRCA1-221ENST00000493795 IGLV4-69A0A075B6H9 119 aa5.9□□□□□ -1.47
BRCA1-221ENST00000493795 TRAV7A0A075B6U4 112 aa5.9□□□□□ -1.47
BRCA1-221ENST00000493795 M0QXV9 152 aa5.9□□□□□ -1.47
BRCA1-221ENST00000493795 HEATR5AQ86XA9 2040 aa5.9□□□□□ -1.47
BRCA1-221ENST00000493795 CACNA1IQ9P0X4 2223 aa5.9□□□□□ -1.47
BRCA1-221ENST00000493795 MYOFQ9NZM1 2061 aa5.9□□□□□ -1.47
BRCA1-221ENST00000493795 SOSTDC1Q6X4U4 206 aa5.9□□□□□ -1.47
BRCA1-221ENST00000493795 LINC00474Q9P2X8 69 aa5.9□□□□□ -1.47
BRCA1-221ENST00000493795 DNAJC9-AS1A6NH13 148 aa5.89□□□□□ -1.47
BRCA1-221ENST00000493795 TRBV6-4A0A1B0GX49 114 aa5.89□□□□□ -1.47
BRCA1-221ENST00000493795 LINC01548A6NM66 108 aa5.89□□□□□ -1.47
BRCA1-221ENST00000493795 LST1O00453 97 aa5.89□□□□□ -1.47
BRCA1-221ENST00000493795 FRMD6-AS1P0C7T7 363 aa5.89□□□□□ -1.47
BRCA1-221ENST00000493795 CFAP126Q5VTH2 177 aa5.89□□□□□ -1.47
BRCA1-221ENST00000493795 LINC00208Q96KT6 92 aa5.89□□□□□ -1.47
BRCA1-221ENST00000493795 COL18A1P39060 1754 aa5.89□□□□□ -1.47
BRCA1-221ENST00000493795 TRAV10A0A0B4J240 114 aa5.89□□□□□ -1.47
BRCA1-221ENST00000493795 ZNF80P51504 273 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-221ENST00000493795 Q8N7P7 452 aa5.89□□□□□ -1.47
BRCA1-221ENST00000493795 TNRC6AQ8NDV7 1962 aaKnown RBP5.88□□□□□ -1.47
BRCA1-221ENST00000493795 CELA1Q9UNI1 258 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 CSDC2Q9Y534 153 aaKnown RBP5.88□□□□□ -1.47
BRCA1-221ENST00000493795 SCN10AQ9Y5Y9 1956 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 CD164L2Q6UWJ8 174 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 U3KQA8 63 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 NACAE9PAV3 2078 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 ZNF73O43830 326 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-221ENST00000493795 DAZAP2Q15038 168 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-221ENST00000493795 KRTAP27-1Q3LI81 207 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 ARID2Q68CP9 1835 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 THADAQ6YHU6 1953 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 COL4A5P29400 1685 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 PLA2G2EQ9NZK7 142 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 AKAP6Q13023 2319 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 COX17Q14061 63 aa5.88□□□□□ -1.47
BRCA1-221ENST00000493795 RPL37AP8A6NKH3 93 aa5.87□□□□□ -1.47
BRCA1-221ENST00000493795 SMIM11BQ8TCY0 68 aa5.87□□□□□ -1.47
BRCA1-221ENST00000493795 MAPKAPK5-AS1Q8N8E1 139 aa5.87□□□□□ -1.47
BRCA1-221ENST00000493795 CEP250Q9BV73 2442 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms