RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 FABP1P07148 127 aa-0.49□□□□□ -2.49
SYCP1-208ENST00000493377 SPINK8P0C7L1 97 aa-0.49□□□□□ -2.49
SYCP1-208ENST00000493377 GCHFRP30047 84 aa-0.49□□□□□ -2.49
SYCP1-208ENST00000493377 SPCS2Q15005 226 aa-0.49□□□□□ -2.49
SYCP1-208ENST00000493377 TMEM244Q5VVB8 128 aa-0.49□□□□□ -2.49
SYCP1-208ENST00000493377 SSBP3-AS1Q7Z2R9 100 aa-0.49□□□□□ -2.49
SYCP1-208ENST00000493377 UBE2DNLQ8IWF7 75 aa-0.49□□□□□ -2.49
SYCP1-208ENST00000493377 CALML5Q9NZT1 146 aa-0.49□□□□□ -2.49
SYCP1-208ENST00000493377 USF3Q68DE3 2245 aa-0.49□□□□□ -2.49
SYCP1-208ENST00000493377 KDM3BQ7LBC6 1761 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 TRAV12-3A0A0B4J271 114 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 TNFSF15O95150 251 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 MT-ND4LP03901 98 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 S100GP29377 79 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 WFDC6Q9BQY6 131 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 BANF2Q9H503 90 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 SPANXCQ9NY87 97 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 IFT172Q9UG01 1749 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 LAMA5O15230 3695 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 HERC2O95714 4834 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 HERC1Q15751 4861 aa-0.5□□□□□ -2.49
SYCP1-208ENST00000493377 NBEAP1P0C6P0 100 aa-0.51□□□□□ -2.49
SYCP1-208ENST00000493377 DEFB109BQ30KR1 87 aa-0.51□□□□□ -2.49
SYCP1-208ENST00000493377 CLLU1Q5K131 121 aa-0.51□□□□□ -2.49
SYCP1-208ENST00000493377 TCTE3Q8IZS6 198 aa-0.51□□□□□ -2.49
SYCP1-208ENST00000493377 HIGD1AQ9Y241 93 aa-0.51□□□□□ -2.49
SYCP1-208ENST00000493377 GINS2Q9Y248 185 aa-0.51□□□□□ -2.49
SYCP1-208ENST00000493377 LSM2Q9Y333 95 aaKnown RBP-0.51□□□□□ -2.49
SYCP1-208ENST00000493377 HSPB11Q9Y547 144 aa-0.51□□□□□ -2.49
SYCP1-208ENST00000493377 ADGRB1O14514 1584 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 ZMYM4Q5VZL5 1548 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 ERCC6Q03468 1493 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 TENM2Q9NT68 2774 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 IBTKQ9P2D0 1353 aaPredicted RBP-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 TRBV20-1A0A075B6N2 111 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 CLPSL1A2RUU4 121 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 TSTD3H0UI37 97 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 M0R3E3 92 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 EDDM3BP56851 147 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 MORN2Q502X0 79 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 LINC01545Q5VT33 79 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 SPANXA1Q9NS26 97 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 NDUFA12Q9UI09 145 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 PRO0255Q9UI72 69 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 MYO7BQ6PIF6 2116 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 MYH8P13535 1937 aa-0.52□□□□□ -2.49
SYCP1-208ENST00000493377 LRRC37A3O60309 1634 aa-0.53□□□□□ -2.49
SYCP1-208ENST00000493377 PIEZO2Q9H5I5 2752 aa-0.53□□□□□ -2.49
SYCP1-208ENST00000493377 S100A5P33763 92 aa-0.53□□□□□ -2.49
SYCP1-208ENST00000493377 SPRR2BP35325 72 aa-0.53□□□□□ -2.49
SYCP1-208ENST00000493377 SMIM15Q7Z3B0 74 aa-0.53□□□□□ -2.49
SYCP1-208ENST00000493377 VSTM2AQ8TAG5 236 aa-0.53□□□□□ -2.49
SYCP1-208ENST00000493377 COL6A3P12111 3177 aa-0.53□□□□□ -2.49
SYCP1-208ENST00000493377 LAMC1P11047 1609 aa-0.53□□□□□ -2.49
SYCP1-208ENST00000493377 DBIP07108 87 aaKnown RBP-0.54□□□□□ -2.5
SYCP1-208ENST00000493377 SPRR1AP35321 89 aa-0.54□□□□□ -2.5
SYCP1-208ENST00000493377 UBE2D1P51668 147 aa-0.54□□□□□ -2.5
SYCP1-208ENST00000493377 RBM3P98179 157 aaKnown RBP-0.54□□□□□ -2.5
SYCP1-208ENST00000493377 C9orf116Q5BN46 136 aaPredicted RBP-0.54□□□□□ -2.5
SYCP1-208ENST00000493377 SPANXN1Q5VSR9 72 aa-0.54□□□□□ -2.5
SYCP1-208ENST00000493377 SAR1AQ9NR31 198 aa-0.54□□□□□ -2.5
SYCP1-208ENST00000493377 RYR3Q15413 4870 aa-0.54□□□□□ -2.5
SYCP1-208ENST00000493377 TRAV1-2A0A0B4J238 106 aa-0.55□□□□□ -2.5
SYCP1-208ENST00000493377 CMPK1P30085 196 aa-0.55□□□□□ -2.5
SYCP1-208ENST00000493377 CCDC153Q494R4 210 aa-0.55□□□□□ -2.5
SYCP1-208ENST00000493377 FAT1Q14517 4588 aa-0.55□□□□□ -2.5
SYCP1-208ENST00000493377 SPTA1P02549 2419 aa-0.55□□□□□ -2.5
SYCP1-208ENST00000493377 ACANP16112 2415 aa-0.55□□□□□ -2.5
SYCP1-208ENST00000493377 GVINP1Q7Z2Y8 2422 aa-0.55□□□□□ -2.5
SYCP1-208ENST00000493377 BCL9LQ86UU0 1499 aa-0.55□□□□□ -2.5
SYCP1-208ENST00000493377 PXDNQ92626 1479 aa-0.55□□□□□ -2.5
SYCP1-208ENST00000493377 ZNF609O15014 1411 aa-0.55□□□□□ -2.5
SYCP1-208ENST00000493377 DAPK1P53355 1430 aa-0.55□□□□□ -2.5
SYCP1-208ENST00000493377 HIVEP1P15822 2718 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 LRP1BQ9NZR2 4599 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 SYNJ1O43426 1573 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 IFNA17P01571 189 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 ZNF818PQ6ZRF7 136 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 BAGE3Q86Y29 109 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 Q8IZM0 81 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 MMGT1Q8N4V1 131 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 RPRMQ9NS64 109 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 PRDM2Q13029 1718 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 EP300Q09472 2414 aaPredicted RBP-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 OVOS2A0A0J9YW53 1432 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 OVOS2Q6IE36 1432 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 PI4KAP42356 2102 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 NF1P21359 2839 aa-0.56□□□□□ -2.5
SYCP1-208ENST00000493377 TMEM2Q9UHN6 1383 aa-0.57□□□□□ -2.5
SYCP1-208ENST00000493377 USH2AO75445 5202 aa-0.57□□□□□ -2.5
SYCP1-208ENST00000493377 NWD2Q9ULI1 1742 aa-0.57□□□□□ -2.5
SYCP1-208ENST00000493377 TRAV22A0A0B4J277 110 aa-0.57□□□□□ -2.5
SYCP1-208ENST00000493377 APOC4-APOC2K7ER74 178 aa-0.57□□□□□ -2.5
SYCP1-208ENST00000493377 PITX3O75364 302 aa-0.57□□□□□ -2.5
SYCP1-208ENST00000493377 TSPAN19P0C672 248 aa-0.57□□□□□ -2.5
SYCP1-208ENST00000493377 PIRTP0C851 137 aa-0.57□□□□□ -2.5
SYCP1-208ENST00000493377 NCS1P62166 190 aa-0.57□□□□□ -2.5
SYCP1-208ENST00000493377 C10orf82Q8WW14 230 aa-0.57□□□□□ -2.5
SYCP1-208ENST00000493377 SPCS1Q9Y6A9 102 aa-0.57□□□□□ -2.5
SYCP1-208ENST00000493377 LRRC37A2A6NM11 1700 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms