RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 AEBP2Q6ZN18 517 aaPredicted RBP33.08■■■□□ 2.89
SYCP1-208ENST00000493377 CHIC1Q5VXU3 224 aa31.03■■■□□ 2.56
SYCP1-208ENST00000493377 SENP3Q9H4L4 574 aaPredicted RBP28.52■■■□□ 2.16
SYCP1-208ENST00000493377 PHF23Q9BUL5 403 aaPredicted RBP27.91■■■□□ 2.06
SYCP1-208ENST00000493377 POTEDQ86YR6 584 aa26.63■■□□□ 1.85
SYCP1-208ENST00000493377 FOXD1Q16676 465 aa26.62■■□□□ 1.85
SYCP1-208ENST00000493377 MSH5O43196 834 aa25.46■■□□□ 1.67
SYCP1-208ENST00000493377 PIAS4Q8N2W9 510 aaPredicted RBP24.64■■□□□ 1.54
SYCP1-208ENST00000493377 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
SYCP1-208ENST00000493377 ADRA2BP18089 450 aa23.85■■□□□ 1.41
SYCP1-208ENST00000493377 PLPPR3Q6T4P5 718 aa23.84■■□□□ 1.41
SYCP1-208ENST00000493377 CACNB1Q02641 598 aaPredicted RBP22.46■■□□□ 1.19
SYCP1-208ENST00000493377 DMRT2Q9Y5R5 561 aa22.42■■□□□ 1.18
SYCP1-208ENST00000493377 MAPK8IP2Q13387 824 aaPredicted RBP22.21■■□□□ 1.15
SYCP1-208ENST00000493377 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
SYCP1-208ENST00000493377 RNF39Q9H2S5 420 aa21.57■■□□□ 1.04
SYCP1-208ENST00000493377 DCAF8L1A6NGE4 600 aa21.49■■□□□ 1.03
SYCP1-208ENST00000493377 C1QBPQ07021 282 aaKnown RBP21.24■□□□□ 0.99
SYCP1-208ENST00000493377 HOXD11P31277 338 aaPredicted RBP21.17■□□□□ 0.98
SYCP1-208ENST00000493377 DNAJC5BQ9UF47 199 aa20.76■□□□□ 0.91
SYCP1-208ENST00000493377 RNF216Q9NWF9 866 aaPredicted RBP20.72■□□□□ 0.91
SYCP1-208ENST00000493377 PPP4R3CPQ6ZMV5 832 aa20.69■□□□□ 0.9
SYCP1-208ENST00000493377 POTEHQ6S545 545 aa20.68■□□□□ 0.9
SYCP1-208ENST00000493377 CNKSR2Q8WXI2 1034 aa20.61■□□□□ 0.89
SYCP1-208ENST00000493377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.81
SYCP1-208ENST00000493377 DSG3P32926 999 aa19.8■□□□□ 0.76
SYCP1-208ENST00000493377 CAPN15O75808 1086 aa19.65■□□□□ 0.74
SYCP1-208ENST00000493377 NCBP3Q53F19 620 aaKnown RBP19.65■□□□□ 0.74
SYCP1-208ENST00000493377 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.72
SYCP1-208ENST00000493377 U3KPZ7 1027 aaPredicted RBP19.57■□□□□ 0.72
SYCP1-208ENST00000493377 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.68
SYCP1-208ENST00000493377 ZNF219Q9P2Y4 722 aaPredicted RBP19.07■□□□□ 0.64
SYCP1-208ENST00000493377 APLP2Q06481 763 aa19.06■□□□□ 0.64
SYCP1-208ENST00000493377 ABCB7O75027 752 aa19.04■□□□□ 0.64
SYCP1-208ENST00000493377 TRHP20396 242 aaPredicted RBP19.04■□□□□ 0.64
SYCP1-208ENST00000493377 RBM42Q9BTD8 480 aaKnown RBP19.02■□□□□ 0.64
SYCP1-208ENST00000493377 CHRDL2Q6WN34 429 aa18.97■□□□□ 0.63
SYCP1-208ENST00000493377 SP7Q8TDD2 431 aaPredicted RBP18.88■□□□□ 0.61
SYCP1-208ENST00000493377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.76■□□□□ 0.59
SYCP1-208ENST00000493377 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
SYCP1-208ENST00000493377 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
SYCP1-208ENST00000493377 SAMD1Q6SPF0 538 aaPredicted RBP18.56■□□□□ 0.56
SYCP1-208ENST00000493377 AKT1S1Q96B36 256 aa18.31■□□□□ 0.52
SYCP1-208ENST00000493377 POLA2Q14181 598 aa18.29■□□□□ 0.52
SYCP1-208ENST00000493377 PIP4P2Q8N4L2 257 aa18.26■□□□□ 0.51
SYCP1-208ENST00000493377 HAX1O00165 279 aa18.23■□□□□ 0.51
SYCP1-208ENST00000493377 REM2Q8IYK8 340 aaPredicted RBP18.09■□□□□ 0.49
SYCP1-208ENST00000493377 FXR2P51116 673 aaKnown RBP eCLIP17.99■□□□□ 0.47
SYCP1-208ENST00000493377 ZBTB12Q9Y330 459 aaPredicted RBP17.96■□□□□ 0.47
SYCP1-208ENST00000493377 PITPNM1O00562 1244 aa17.91■□□□□ 0.46
SYCP1-208ENST00000493377 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
SYCP1-208ENST00000493377 KCNA4P22459 653 aa17.88■□□□□ 0.45
SYCP1-208ENST00000493377 EVX2Q03828 476 aa17.83■□□□□ 0.44
SYCP1-208ENST00000493377 OSCARQ8IYS5 282 aa17.75■□□□□ 0.43
SYCP1-208ENST00000493377 LHX8Q68G74 356 aa17.67■□□□□ 0.42
SYCP1-208ENST00000493377 C19orf67A6NJJ6 358 aa17.46■□□□□ 0.39
SYCP1-208ENST00000493377 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
SYCP1-208ENST00000493377 GABBR2O75899 941 aa17.45■□□□□ 0.38
SYCP1-208ENST00000493377 PLSCR2Q9NRY7 297 aa17.44■□□□□ 0.38
SYCP1-208ENST00000493377 PRKAR2AP13861 404 aaKnown RBP17.43■□□□□ 0.38
SYCP1-208ENST00000493377 SPDYE2BA6NHP3 402 aa17.26■□□□□ 0.35
SYCP1-208ENST00000493377 SPDYE6P0CI01 402 aa17.26■□□□□ 0.35
SYCP1-208ENST00000493377 SPDYE2Q495Y8 402 aa17.26■□□□□ 0.35
SYCP1-208ENST00000493377 SPDYE1Q8NFV5 336 aaPredicted RBP17.23■□□□□ 0.35
SYCP1-208ENST00000493377 CLEC11AQ9Y240 323 aa17.19■□□□□ 0.34
SYCP1-208ENST00000493377 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
SYCP1-208ENST00000493377 POTEIP0CG38 1075 aa17.03■□□□□ 0.32
SYCP1-208ENST00000493377 FBLN2P98095 1184 aa16.99■□□□□ 0.31
SYCP1-208ENST00000493377 CLCN6P51797 869 aa16.95■□□□□ 0.3
SYCP1-208ENST00000493377 CHADLQ6NUI6 762 aa16.93■□□□□ 0.3
SYCP1-208ENST00000493377 SSUH2Q9Y2M2 353 aa16.89■□□□□ 0.29
SYCP1-208ENST00000493377 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
SYCP1-208ENST00000493377 CD44P16070 742 aaKnown RBP16.82■□□□□ 0.28
SYCP1-208ENST00000493377 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
SYCP1-208ENST00000493377 DCBLD2Q96PD2 775 aa16.78■□□□□ 0.28
SYCP1-208ENST00000493377 ATXN8OSP0DMR3 200 aa16.75■□□□□ 0.27
SYCP1-208ENST00000493377 POTEMA6NI47 508 aa16.7■□□□□ 0.26
SYCP1-208ENST00000493377 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
SYCP1-208ENST00000493377 OTUD5Q96G74 571 aa16.64■□□□□ 0.25
SYCP1-208ENST00000493377 FARP1Q9Y4F1 1045 aaPredicted RBP16.64■□□□□ 0.25
SYCP1-208ENST00000493377 MKRN4PQ13434 485 aaPredicted RBP16.63■□□□□ 0.25
SYCP1-208ENST00000493377 POTEGQ6S5H5 508 aa16.61■□□□□ 0.25
SYCP1-208ENST00000493377 PCDH10Q9P2E7 1040 aa16.6■□□□□ 0.25
SYCP1-208ENST00000493377 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
SYCP1-208ENST00000493377 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
SYCP1-208ENST00000493377 POTEB2H3BUK9 544 aa16.43■□□□□ 0.22
SYCP1-208ENST00000493377 ZRANB1Q9UGI0 708 aa16.4■□□□□ 0.22
SYCP1-208ENST00000493377 ZBTB22O15209 634 aa16.39■□□□□ 0.21
SYCP1-208ENST00000493377 GALR2O43603 387 aaPredicted RBP16.35■□□□□ 0.21
SYCP1-208ENST00000493377 MAMSTRQ6ZN01 415 aa16.13■□□□□ 0.17
SYCP1-208ENST00000493377 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
SYCP1-208ENST00000493377 PELP1Q8IZL8 1130 aaKnown RBP16.1■□□□□ 0.17
SYCP1-208ENST00000493377 LCE2DQ5TA82 110 aaPredicted RBP16.08■□□□□ 0.16
SYCP1-208ENST00000493377 CREBZFQ9NS37 354 aa16.07■□□□□ 0.16
SYCP1-208ENST00000493377 METRNQ9UJH8 293 aa16.07■□□□□ 0.16
SYCP1-208ENST00000493377 PHF12Q96QT6 1004 aa16.04■□□□□ 0.16
SYCP1-208ENST00000493377 SLC39A7Q92504 469 aa16.03■□□□□ 0.16
SYCP1-208ENST00000493377 C7P10643 843 aa16.02■□□□□ 0.16
SYCP1-208ENST00000493377 POTEJP0CG39 1038 aa16.01■□□□□ 0.15
SYCP1-208ENST00000493377 ASTLQ6HA08 431 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms