RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 NWD2Q9ULI1 1742 aa1.49□□□□□ -2.17
VPS26A-206ENST00000489794 TRAV13-2A0A0B4J235 113 aa1.49□□□□□ -2.17
VPS26A-206ENST00000489794 TRBV30A0A0K0K1B3 111 aa1.49□□□□□ -2.17
VPS26A-206ENST00000489794 A0A1W2PPM0 123 aa1.49□□□□□ -2.17
VPS26A-206ENST00000489794 UBE2D1P51668 147 aa1.49□□□□□ -2.17
VPS26A-206ENST00000489794 KRTAP10-4P60372 401 aaPredicted RBP1.49□□□□□ -2.17
VPS26A-206ENST00000489794 HSD52Q0P140 79 aa1.49□□□□□ -2.17
VPS26A-206ENST00000489794 ZNF56Q15929 161 aa1.49□□□□□ -2.17
VPS26A-206ENST00000489794 C8orf59Q8N0T1 100 aaPredicted RBP1.49□□□□□ -2.17
VPS26A-206ENST00000489794 SPANXDQ9BXN6 97 aa1.49□□□□□ -2.17
VPS26A-206ENST00000489794 ARAP2Q8WZ64 1704 aa1.49□□□□□ -2.17
VPS26A-206ENST00000489794 CPSF1Q10570 1443 aaKnown RBP1.49□□□□□ -2.17
VPS26A-206ENST00000489794 PLXNA1Q9UIW2 1896 aa1.48□□□□□ -2.17
VPS26A-206ENST00000489794 IFITM1P13164 125 aa1.48□□□□□ -2.17
VPS26A-206ENST00000489794 CCL3L1P16619 93 aa1.48□□□□□ -2.17
VPS26A-206ENST00000489794 CCL8P80075 99 aa1.48□□□□□ -2.17
VPS26A-206ENST00000489794 CASKIN1Q8WXD9 1431 aa1.48□□□□□ -2.17
VPS26A-206ENST00000489794 PHIPQ8WWQ0 1821 aa1.47□□□□□ -2.17
VPS26A-206ENST00000489794 MAPKBP1O60336 1514 aa1.47□□□□□ -2.17
VPS26A-206ENST00000489794 ZFYVE16Q7Z3T8 1539 aa1.47□□□□□ -2.17
VPS26A-206ENST00000489794 TMEM218A2RU14 115 aa1.47□□□□□ -2.17
VPS26A-206ENST00000489794 HCG22E2RYF7 251 aa1.47□□□□□ -2.17
VPS26A-206ENST00000489794 SPINK8P0C7L1 97 aa1.47□□□□□ -2.17
VPS26A-206ENST00000489794 C5orf38Q86SI9 138 aa1.47□□□□□ -2.17
VPS26A-206ENST00000489794 PARP14Q460N5 1801 aa1.47□□□□□ -2.17
VPS26A-206ENST00000489794 PATJQ8NI35 1801 aa1.46□□□□□ -2.18
VPS26A-206ENST00000489794 ARFGEF1Q9Y6D6 1849 aa1.46□□□□□ -2.18
VPS26A-206ENST00000489794 FAM24AA6NFZ4 105 aa1.46□□□□□ -2.18
VPS26A-206ENST00000489794 SSBP1Q04837 148 aaKnown RBP1.46□□□□□ -2.18
VPS26A-206ENST00000489794 KLKP1Q107X0 134 aa1.46□□□□□ -2.18
VPS26A-206ENST00000489794 ZNF818PQ6ZRF7 136 aa1.46□□□□□ -2.18
VPS26A-206ENST00000489794 PPP1R1CQ8WVI7 109 aa1.46□□□□□ -2.18
VPS26A-206ENST00000489794 BET1LQ9NYM9 111 aa1.46□□□□□ -2.18
VPS26A-206ENST00000489794 CNTLNQ9NXG0 1405 aa1.46□□□□□ -2.18
VPS26A-206ENST00000489794 MYH8P13535 1937 aa1.46□□□□□ -2.18
VPS26A-206ENST00000489794 CCNB3Q8WWL7 1395 aa1.46□□□□□ -2.18
VPS26A-206ENST00000489794 DOCK1Q14185 1865 aa1.46□□□□□ -2.18
VPS26A-206ENST00000489794 KDM6BO15054 1643 aa1.45□□□□□ -2.18
VPS26A-206ENST00000489794 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.45□□□□□ -2.18
VPS26A-206ENST00000489794 CLPSL1A2RUU4 121 aa1.45□□□□□ -2.18
VPS26A-206ENST00000489794 ELOF1P60002 83 aaKnown RBP1.45□□□□□ -2.18
VPS26A-206ENST00000489794 C4orf33Q8N1A6 199 aa1.45□□□□□ -2.18
VPS26A-206ENST00000489794 COX7B2Q8TF08 81 aa1.45□□□□□ -2.18
VPS26A-206ENST00000489794 LINC00312Q9Y6C7 94 aa1.45□□□□□ -2.18
VPS26A-206ENST00000489794 SMARCA2P51531 1590 aa1.45□□□□□ -2.18
VPS26A-206ENST00000489794 ROS1P08922 2347 aa1.44□□□□□ -2.18
VPS26A-206ENST00000489794 CNTRLQ7Z7A1 2325 aa1.44□□□□□ -2.18
VPS26A-206ENST00000489794 TRAV30A0A087WSZ9 112 aa1.44□□□□□ -2.18
VPS26A-206ENST00000489794 SIX6O95475 246 aa1.44□□□□□ -2.18
VPS26A-206ENST00000489794 FAM74A4Q5TZK3 123 aa1.44□□□□□ -2.18
VPS26A-206ENST00000489794 COMMD6Q7Z4G1 85 aa1.44□□□□□ -2.18
VPS26A-206ENST00000489794 AQP10Q96PS8 301 aa1.44□□□□□ -2.18
VPS26A-206ENST00000489794 TMEM14BQ9NUH8 114 aa1.44□□□□□ -2.18
VPS26A-206ENST00000489794 ZDBF2Q9HCK1 2354 aa1.44□□□□□ -2.18
VPS26A-206ENST00000489794 MED13LQ71F56 2210 aa1.44□□□□□ -2.18
VPS26A-206ENST00000489794 CC2D2AQ9P2K1 1620 aa1.44□□□□□ -2.18
VPS26A-206ENST00000489794 ABCA1O95477 2261 aa1.43□□□□□ -2.18
VPS26A-206ENST00000489794 TRBV7-1A0A0A6YYK4 115 aa1.43□□□□□ -2.18
VPS26A-206ENST00000489794 UBE2L5PA0A1B0GUS4 154 aa1.43□□□□□ -2.18
VPS26A-206ENST00000489794 RBAKDNA6NC62 111 aa1.43□□□□□ -2.18
VPS26A-206ENST00000489794 S100A8P05109 93 aa1.43□□□□□ -2.18
VPS26A-206ENST00000489794 UBE2L3P68036 154 aaKnown RBP1.43□□□□□ -2.18
VPS26A-206ENST00000489794 SPHKAPQ2M3C7 1700 aa1.43□□□□□ -2.18
VPS26A-206ENST00000489794 TNS1Q9HBL0 1735 aaKnown RBP1.43□□□□□ -2.18
VPS26A-206ENST00000489794 A0A087WTM6 91 aa1.42□□□□□ -2.18
VPS26A-206ENST00000489794 SSSCA1O60232 199 aa1.42□□□□□ -2.18
VPS26A-206ENST00000489794 ATP5EP56381 51 aaPredicted RBP1.42□□□□□ -2.18
VPS26A-206ENST00000489794 EDDM3BP56851 147 aa1.42□□□□□ -2.18
VPS26A-206ENST00000489794 S100A10P60903 97 aa1.42□□□□□ -2.18
VPS26A-206ENST00000489794 C10orf128Q5T292 105 aa1.42□□□□□ -2.18
VPS26A-206ENST00000489794 C10orf99Q6UWK7 81 aa1.42□□□□□ -2.18
VPS26A-206ENST00000489794 TTC9CQ8N5M4 171 aa1.42□□□□□ -2.18
VPS26A-206ENST00000489794 DPH3P1Q9H4G8 78 aa1.42□□□□□ -2.18
VPS26A-206ENST00000489794 PPIP5K1Q6PFW1 1433 aa1.41□□□□□ -2.18
VPS26A-206ENST00000489794 C10orf71Q711Q0 1435 aa1.41□□□□□ -2.18
VPS26A-206ENST00000489794 VPS8Q8N3P4 1428 aa1.41□□□□□ -2.18
VPS26A-206ENST00000489794 DOCK2Q92608 1830 aa1.41□□□□□ -2.18
VPS26A-206ENST00000489794 LY6G6CO95867 125 aa1.41□□□□□ -2.18
VPS26A-206ENST00000489794 ACBD7Q8N6N7 88 aa1.41□□□□□ -2.18
VPS26A-206ENST00000489794 TSLPQ969D9 159 aa1.41□□□□□ -2.18
VPS26A-206ENST00000489794 LINC00474Q9P2X8 69 aa1.41□□□□□ -2.18
VPS26A-206ENST00000489794 V9GYV3 84 aa1.41□□□□□ -2.18
VPS26A-206ENST00000489794 SHROOM2Q13796 1616 aa1.4□□□□□ -2.18
VPS26A-206ENST00000489794 KNTC1P50748 2209 aa1.4□□□□□ -2.18
VPS26A-206ENST00000489794 SNCAP37840 140 aa1.4□□□□□ -2.19
VPS26A-206ENST00000489794 DCDP81605 110 aaKnown RBP1.4□□□□□ -2.19
VPS26A-206ENST00000489794 NCMAPQ5T1S8 102 aa1.4□□□□□ -2.19
VPS26A-206ENST00000489794 MYOZ3Q8TDC0 251 aa1.4□□□□□ -2.19
VPS26A-206ENST00000489794 PLAC4Q8WY50 150 aa1.4□□□□□ -2.19
VPS26A-206ENST00000489794 LRRC37A3O60309 1634 aa1.4□□□□□ -2.19
VPS26A-206ENST00000489794 M0R143 59 aa1.39□□□□□ -2.19
VPS26A-206ENST00000489794 Q8N6K4 173 aa1.39□□□□□ -2.19
VPS26A-206ENST00000489794 CYP4F30PQ9H0H9 118 aa1.39□□□□□ -2.19
VPS26A-206ENST00000489794 ARHGAP5Q13017 1502 aa1.39□□□□□ -2.19
VPS26A-206ENST00000489794 SCAPERQ9BY12 1400 aa1.39□□□□□ -2.19
VPS26A-206ENST00000489794 TMEM262E9PQX1 116 aa1.38□□□□□ -2.19
VPS26A-206ENST00000489794 LOC285556D6RIA3 1793 aa1.38□□□□□ -2.19
VPS26A-206ENST00000489794 SPINT3P49223 89 aa1.37□□□□□ -2.19
VPS26A-206ENST00000489794 GNG11P61952 73 aa1.37□□□□□ -2.19
VPS26A-206ENST00000489794 MAP2P11137 1827 aaKnown RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms