RNA–Protein interactions for RNA: ENST00000488471.1

KIF3A-207, Transcript of kinesin family member 3A, humanhuman

TSL 2

Gene KIF3A, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-207ENST00000488471 APOC3P02656 99 aa1.75□□□□□ -2.13
KIF3A-207ENST00000488471 UBE2D3P61077 147 aa1.75□□□□□ -2.13
KIF3A-207ENST00000488471 UBE2D2P62837 147 aa1.75□□□□□ -2.13
KIF3A-207ENST00000488471 COA5Q86WW8 74 aa1.75□□□□□ -2.13
KIF3A-207ENST00000488471 ST20Q9HBF5 79 aa1.75□□□□□ -2.13
KIF3A-207ENST00000488471 NXT2Q9NPJ8 142 aaKnown RBP1.75□□□□□ -2.13
KIF3A-207ENST00000488471 TMEM14CQ9P0S9 112 aa1.75□□□□□ -2.13
KIF3A-207ENST00000488471 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
KIF3A-207ENST00000488471 PHIPQ8WWQ0 1821 aa1.75□□□□□ -2.13
KIF3A-207ENST00000488471 MARF1Q9Y4F3 1742 aaKnown RBP1.74□□□□□ -2.13
KIF3A-207ENST00000488471 CC2D2AQ9P2K1 1620 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 TRAV22A0A0B4J277 110 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 TRBV6-5A0A0K0K1A5 114 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 H7BZZ5 65 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 M0R2N4 97 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 BCE1O60756 84 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 ELOF1P60002 83 aaKnown RBP1.74□□□□□ -2.13
KIF3A-207ENST00000488471 ZNF56Q15929 161 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 DEFB132Q7Z7B7 95 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 WFDC10AQ9H1F0 79 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 SPCS1Q9Y6A9 102 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 GPR179Q6PRD1 2367 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 ERICH3Q5RHP9 1530 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 TNRC6AQ8NDV7 1962 aaKnown RBP1.74□□□□□ -2.13
KIF3A-207ENST00000488471 COL4A5P29400 1685 aa1.74□□□□□ -2.13
KIF3A-207ENST00000488471 LAMB2P55268 1798 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 CHKB-CPT1BH3BT56 60 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 COX6CP09669 75 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 EDDM3BP56851 147 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 SSBP1Q04837 148 aaKnown RBP1.73□□□□□ -2.13
KIF3A-207ENST00000488471 Q5VV11 94 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 BRD3OSQ6XYD6 125 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 LINC00322Q6ZN03 302 aaPredicted RBP1.73□□□□□ -2.13
KIF3A-207ENST00000488471 C20orf197Q8N268 126 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 Q8N6K4 173 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 CYSTM1Q9H1C7 97 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 DYNLRB1Q9NP97 96 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 SMCO4Q9NRQ5 59 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 PXDNQ92626 1479 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 KIAA1549LQ6ZVL6 1849 aa1.73□□□□□ -2.13
KIF3A-207ENST00000488471 SHROOM3Q8TF72 1996 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 COL4A2P08572 1712 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 MYOFQ9NZM1 2061 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 LOC285095A0A1B0GVY8 99 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 CLPSL1A2RUU4 121 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 SMIM11AP58511 58 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 ETDBQ3ZM63 59 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 SPATA45Q537H7 98 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 NMSQ5H8A3 153 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 VMO1Q7Z5L0 202 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 CDC42SE2Q9NRR3 84 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 LENEPQ9Y5L5 61 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 MICAL3Q7RTP6 2002 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 COL11A1P12107 1806 aaPredicted RBP1.72□□□□□ -2.13
KIF3A-207ENST00000488471 EML5Q05BV3 1969 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 SNRNP200O75643 2136 aaKnown RBP1.72□□□□□ -2.13
KIF3A-207ENST00000488471 NUMA1Q14980 2115 aa1.72□□□□□ -2.13
KIF3A-207ENST00000488471 ARHGEF12Q9NZN5 1544 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 MED13Q9UHV7 2174 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 MLH3Q9UHC1 1453 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 A0A0G2JND7 137 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 LOC101927531A0A1B0GV80 90 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 A0A1W2PPM0 123 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 TMEM14DPA8MWL7 114 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 DNAL4O96015 105 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 CCL3L1P16619 93 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 KLKP1Q107X0 134 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 Q6ZRN7 208 aaPredicted RBP1.71□□□□□ -2.14
KIF3A-207ENST00000488471 Q86TA4 180 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 KRTAP13-1Q8IUC0 172 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 COX7B2Q8TF08 81 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 PPP1R1CQ8WVI7 109 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 LINC01600Q96MT4 127 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 BPESC1Q9GZL8 116 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 LAMB1P07942 1786 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 EDC4Q6P2E9 1401 aaKnown RBP1.71□□□□□ -2.14
KIF3A-207ENST00000488471 NINQ8N4C6 2090 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 LAMC3Q9Y6N6 1575 aa1.71□□□□□ -2.14
KIF3A-207ENST00000488471 ATP10BO94823 1461 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 LOC110117498A0A087WWA1 95 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 TRBV6-7A0A0A0MS04 114 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 KANTRA0A1W2PQU2 76 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 PDCD5O14737 125 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 SNRPFP62306 86 aaKnown RBP1.7□□□□□ -2.14
KIF3A-207ENST00000488471 WFDC2Q14508 124 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 FAM74A4Q5TZK3 123 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 ARAP2Q8WZ64 1704 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 NDUFA4L2Q9NRX3 87 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 HIGD1BQ9P298 99 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 SNURFQ9Y675 71 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 ADAMTS7Q9UKP4 1686 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 RTTNQ86VV8 2226 aa1.7□□□□□ -2.14
KIF3A-207ENST00000488471 CCDC141Q6ZP82 1450 aa1.69□□□□□ -2.14
KIF3A-207ENST00000488471 PLXNA2O75051 1894 aa1.69□□□□□ -2.14
KIF3A-207ENST00000488471 TNS1Q9HBL0 1735 aaKnown RBP1.69□□□□□ -2.14
KIF3A-207ENST00000488471 TRBV25-1A0A075B6N4 114 aa1.69□□□□□ -2.14
KIF3A-207ENST00000488471 IGKV3D-7A0A0C4DH55 119 aa1.69□□□□□ -2.14
KIF3A-207ENST00000488471 IGKV3OR2-268A0A0C4DH90 116 aa1.69□□□□□ -2.14
KIF3A-207ENST00000488471 PPP1R17O96001 155 aa1.69□□□□□ -2.14
KIF3A-207ENST00000488471 IGLC2P0DOY2 106 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms